MELO3C030757 (gene) Melon (DHL92) v4

Overview
NameMELO3C030757
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionPre-mRNA-splicing factor CWC25-like protein
Locationchr04: 11893018 .. 11897373 (-)
RNA-Seq ExpressionMELO3C030757
SyntenyMELO3C030757
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATGTCGGTTTTTAAAATGCAGATTTTTAATGTCAGTTTTAAACCGACATCAAAGATGAAGGTATAATGTCGGTTTTAAACTGACATTAAAGGCACCTTAGTTTAAAAACGACATTAAAGGTATATTATTGATTATTATTATAATTATAAATAGTAAGTGGAAAATAGTTAGGTCAGAGTTTTTAATTTCACACCTAGGGTTAAGCTCACGCCGCCTCTACCGTCTCTCTCACTCAAGACCTCGTCTCGACCTCTCATCTTACCAATTACCGGCGTTCAATCGATCTTCCTTCTCAATCTACAGTCTCTCTTCTTCTCCAAAATCTCTCAATCTCCAATCGTCTCTCCTTCTTAGAAGTCTCCGATCGTCGCTTAGAAGATTCGGCCGTGTTTCAATTTTTTCCATCTCCTTCTTTCTTTTGTTATCCGTGTTTCATTTTTTTAGGTTTCAGAAGAAGATATGGGAGAACCGATATGCATGACTTTGGTCGTTGCTGCTGGTAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACATTTTTTAGGTCATTTAATTTCATCCGATTTGTTTTTTATTCTTCCTTGAGTTGTTTGATCACTAGTAGTATAGTGTTTCTTTGATTCTCAATTTTTTGGATTTCATTAAGGAAGCATGAGACATTGAATTTGCTTTATGAATTGGGTTTGGAAGTTGGGAAAGCTAGCAATTCCGATGGATTTAAAAGCCTTGAAACCCTACCTAGTTCAACTATTGCCGCGACTGCCACTGAACCATCTAGTTCCAAGGCACTATTGCAGTTTTTCGTTGATTTGTGTGCTTTGGTTATCTCTCTTTGTATTGTTCAATTATGATGTTTGTTGGATATTAGAGCTCTGTTTGAGGATGAGCCTCATTCTGCCAATGATGCATGGAGGAAACTCCATTCTGATCCTTTGCTCATCATTTAACAGCGTGAGAATAAGCTCTTGCTCGCGTAAAAAACAATTCTATGGCTTTAACGCCACTAAACCTTACAAGTTTTATTCTTATAACACGGGCTATGGAAATTTTATGTGGAAACATCTTTCTTCCTTTCATTATTTTGTAGAGATATTTTTTGAACTTTTCTCTTAGTTTGTTCATGGACACTTTACTTGGTGGCTTATCTAAATACTAAGTTATTCTTTTGAGCTGATGTGATGAATTTCTCTGCATTTCTCTTACTCTTTCGATAGAAGCTAAAGATGAATCTTTGATCAGAGAGTTTTTTTCTACATTATTGCTGAGACAATCTTGGCATAGAGTAAATGCTTATCAGCATTATTTAATCTGTCATTGATTTTTGTTGTAGAGATTAAAGTTATCCCTATCCAAAGTAGATTAGAAGACAAGAAAGTAATGGTCATTTAGTAAATATTTTAGTCTGAAATGGACAAGCTAAAGTAGAGAATACAGTTATATTGAAGGAAGGTAGAGTTCAATAATGTATTGAACAAAAACTGAGAAATGATAGATTTCTAGGATTTCTCAAGTTCATAATGGATTTCTAGGATTTTCTCCAACAATTTTCAATAAATAAACAATCAAATCACCAACAATTTTCTTTTGCATTTTCTAACACTGACTCTGCTGAAAACAAGGAACCTGACCAATCCCTTTACATTTTTCTATTACCTATTTCTTCTCAATTTTTAAATATAAAACTGCATTCTAGGTGTTTGTATAAACGTTGCACTGGTGAAGTTTTGGGTTTTAGGTTTTGTTTCTTATGTGCTTATTGGTTGAGACTTTTTTTGTTTTTGGTTTGATTTTGATCTTTAATTCTAATGGTAAATTGATCTTATAGTATTGAAAGATTTGGGGTATTTGATCTTATAGTGTTGAATATAGTTGTGTTTATTGATACGTGATTATATGTAGGTGTTGGATGATGTATATTTGTTGTAGTTCTATATGGAAGTGTTGAAAATTGTATGCTGGTATTTTAAGTGTTGATCTTGTGTGCATTGCAGGTGAAATAGAAGTATAAGGTTTGCCACGGAGCGTAACATTTACGAAATTGTGCTTTTTTTGGTTTTTGGCTTTTGGTTTTTGCTTCGTCTTTGTGCAATCTACTTGGCAGCTTGAAAGGTGGAAATGACCATATAGATAGATGGTCAGACGATCGTTGAAGGTTGAAGACTGAAAAGGTGTTTGGTCGTGGGTATCTTGCATTTTTCGTGCTTGATCTCTGTATATGATATACTATGATCACGAATACTCTGTACCATGTTAACTTGTTTAAAGTTTGTTGTAATAGTCACATTGTATGCGTGGTCAAAGTCCCTATCAATTGTCATTTCCTAGCTTACTAGTTTATCCGTTTCAGATTGTTAATAGAATCAAGAAGTTAAGGAAGAAAGTTGCCCTTGAACCTATAGATACAGTAGAAGTGTATTTTCGATCACAAGATTAGGATACATCACTAGCACATAAAGACATCAAAGCCCAATTTCTAATTTTTTTTTTTATAATTATGCTCAAGGGAGACTCGTCTTTCGCTCCATGCTTTCATTAACTAATTTCTAATTATTTTTTTTAATGTTTGTATACTTATGAACTCACCGGTTATTTTTATCTATACCTCACTGATTTGGACTGTGGTCTCCTTGCTTTTCCACTTGTTGTTGCTGCAGAGCGGAGGAGAGCTACTGTAAGTTATGTGTATTTGTTGCAACTCTCTATTGATTGTTTTTATTGTTTGATGAATGTTGTTTTTCTGATAAGAAGTATTATTGGAAATTTGAAAGGGATTGTGATTTTCATACTAGTTGTGCTGAAATGGCTTGTTGATTTTTGGTTTAAGTTATACTTTTGTATAGAAATGCTTTAGGTCACTAGTTTGTGACTGAATAGAAGAAATTTGTAGAGGGAATTTTTAGCAAACACATTTTTCACTTCCTCTATTTCCATAGTAATTTTATCAATTATCGAACTCATTTCCTCTTTTCACTTCCTTGTCCTTACCTTCATTTTTCACCTATTCCTTTCAATCAAAGCTTCAATTCCTGCTTGCTGCACCAGAACTTCTCTGTTTTCTTTCACGTTAGGGTAAATGTTGGTGTATATCTTGATAGAGCGATCTGAATTGGGAGGGTGATCCACTTTCTCCTAACTGACACATAAATCTTTTTTCTTTGAATGTAGTTTACATGCTTCAGGAGCAGGAAGCACATGCGGCAGAGGTAATACAACAAACTTGGATTCCTTGTTCTCGTTTTCCTTGCCCTTAATGAGTAGTTAGTGATCCCCATTAATTATTCTAACTTACTTTCTCATAACTTCTCTCAGTTTGAGCGCACGTTTATAGCCATTAAGCCAGATGGTGTACAGAGAGGGCTGGTAAGACTAAACATACCCATGCGATGTTTTTCTTGATGCCAATTCTCATTTGACATTTAGCAGCTCTGTTTTATTATCTTGCACCTTGGTATTTGTTTTCAAGATTGTGAGCTCTCTTGATTTTTTCAATTTTCAATCTTCAACATGAATGATACTTCTTTAGATTCGCTAATTTTGAATCCAATCATATGTTTTGTTTTTGGGTCGACTGGCCATTTAGATTCATGGGCTGGATATTATAATGCATAGTTCATGTGTCTTGTGAAAGATGAGGTTCTTGATTTTTTTTACATGAGGTTCTCGATATGATTCACAAATTTTCTGTCATTCCTCGATGATCTAGTCAATCGTCATCTTCAGTTCTCTTATGATTTACTTAAATAGCTATAATGGTTGTTGCTTTAGTTAATGTAGTTAATCGAGGAGTGAGTTTTTAGTCTCTTAATTTAATTTATTGATAATGAGAAATGGAAATATTTATGCTAACTCATGTTTTTAATTTCCTTAAAAAAAAGTTTTGGGTTCTTTTGCATATTCCGATTGCTGCAATCGATCCATCTAACCATCCTCAGACACTTCTGCATTGCGCAATAAAAGTTATGTTTGGTAACCAACCTTTTGCTTTATTAATTAGTAATCAAATGTGAATATTTCTACTAGCAACTAGGTCATAACATTGTTACTTATCAATTCAACCATCTTGATGTCTTTTACAGGGAGTTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTTTGTGACAAGATCTTGAAGTTGGTCATTTGTGAAGCGTTCTAGTTTGCTATTAGTTGAAGTTTTAGTTATTGTTCTCTCAATATATTCTTTTTCTTTCTTTCTTTTTTTCCAAAGGATGATCAGTATAATAATTAAGCTTCATAATTTCTTTGTGTTTGGAGCCAAGTTGTATATAAATGTACACATTATTAAG

mRNA sequence

TAATGTCGGTTTTTAAAATGCAGATTTTTAATGTCAGTTTTAAACCGACATCAAAGATGAAGTGGAAAATAGTTAGGTCAGAGTTTTTAATTTCACACCTAGGGTTAAGCTCACGCCGCCTCTACCGTCTCTCTCACTCAAGACCTCGTCTCGACCTCTCATCTTACCAATTACCGGCGTTCAATCGATCTTCCTTCTCAATCTACAGTCTCTCTTCTTCTCCAAAATCTCTCAATCTCCAATCGTCTCTCCTTCTTAGAAGTCTCCGATCGTCGCTTAGAAGATTCGGCCGTGTTTCAGAAGAAGATATGGGAGAACCGATATGCATGACTTTGGTCGTTGCTGCTGGTAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACATTTTTTAGGAAGCATGAGACATTGAATTTGCTTTATGAATTGGGTTTGGAAGTTGGGAAAGCTAGCAATTCCGATGGATTTAAAAGCCTTGAAACCCTACCTAGTTCAACTATTGCCGCGACTGCCACTGAACCATCTAGTTCCAAGGCACTATTGCAGTTTTTCGTTGATTTGTGTGCTTTGTCACATTGTATGCGTGGTCAAAGTCCCTATCAATTGTCATTTCCTAGCTTACTAGTTTATCCGTTTCAGATTGTTAATAGAATCAAGAAGTTAAGGAAGAAAGTTGCCCTTGAACCTATAGATACAGTAGAAGTAGCGGAGGAGAGCTACTTTTACATGCTTCAGGAGCAGGAAGCACATGCGGCAGAGTTTGAGCGCACGTTTATAGCCATTAAGCCAGATGGTGTACAGAGAGGGCTGTTTTGGGTTCTTTTGCATATTCCGATTGCTGCAATCGATCCATCTAACCATCCTCAGACACTTCTGCATTGCGCAATAAAAGGAGTTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTTTGTGACAAGATCTTGAAGTTGGTCATTTGTGAAGCGTTCTAGTTTGCTATTAGTTGAAGTTTTAGTTATTGTTCTCTCAATATATTCTTTTTCTTTCTTTCTTTTTTTCCAAAGGATGATCAGTATAATAATTAAGCTTCATAATTTCTTTGTGTTTGGAGCCAAGTTGTATATAAATGTACACATTATTAAG

Coding sequence (CDS)

ATGTCGGTTTTTAAAATGCAGATTTTTAATGTCAGTTTTAAACCGACATCAAAGATGAAGTGGAAAATAGTTAGGTCAGAGTTTTTAATTTCACACCTAGGGTTAAGCTCACGCCGCCTCTACCGTCTCTCTCACTCAAGACCTCGTCTCGACCTCTCATCTTACCAATTACCGGCGTTCAATCGATCTTCCTTCTCAATCTACAGTCTCTCTTCTTCTCCAAAATCTCTCAATCTCCAATCGTCTCTCCTTCTTAGAAGTCTCCGATCGTCGCTTAGAAGATTCGGCCGTGTTTCAGAAGAAGATATGGGAGAACCGATATGCATGACTTTGGTCGTTGCTGCTGGTAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACATTTTTTAGGAAGCATGAGACATTGAATTTGCTTTATGAATTGGGTTTGGAAGTTGGGAAAGCTAGCAATTCCGATGGATTTAAAAGCCTTGAAACCCTACCTAGTTCAACTATTGCCGCGACTGCCACTGAACCATCTAGTTCCAAGGCACTATTGCAGTTTTTCGTTGATTTGTGTGCTTTGTCACATTGTATGCGTGGTCAAAGTCCCTATCAATTGTCATTTCCTAGCTTACTAGTTTATCCGTTTCAGATTGTTAATAGAATCAAGAAGTTAAGGAAGAAAGTTGCCCTTGAACCTATAGATACAGTAGAAGTAGCGGAGGAGAGCTACTTTTACATGCTTCAGGAGCAGGAAGCACATGCGGCAGAGTTTGAGCGCACGTTTATAGCCATTAAGCCAGATGGTGTACAGAGAGGGCTGTTTTGGGTTCTTTTGCATATTCCGATTGCTGCAATCGATCCATCTAACCATCCTCAGACACTTCTGCATTGCGCAATAAAAGGAGTTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAG

Protein sequence

MSVFKMQIFNVSFKPTSKMKWKIVRSEFLISHLGLSSRRLYRLSHSRPRLDLSSYQLPAFNRSSFSIYSLSSSPKSLNLQSSLLLRSLRSSLRRFGRVSEEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLETLPSSTIAATATEPSSSKALLQFFVDLCALSHCMRGQSPYQLSFPSLLVYPFQIVNRIKKLRKKVALEPIDTVEVAEESYFYMLQEQEAHAAEFERTFIAIKPDGVQRGLFWVLLHIPIAAIDPSNHPQTLLHCAIKGVITKQMTAIEEMVASEYN
Homology
[Close]
BLAST of MELO3C030757 vs. NCBI nr
Match: KAA0037864.1 (pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa] >TYK09818.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 159.5 bits (402), Expect = 4.9e-35
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 103 MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 162
           MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE
Sbjct: 1   MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 60

Query: 163 TLPSSTIAATATEPSSSKALLQ 185
           TLPSSTIAATATEPSSSKALLQ
Sbjct: 61  TLPSSTIAATATEPSSSKALLQ 82

[Close]
BLAST of MELO3C030757 vs. NCBI nr
Match: KAA0034965.1 (pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa] >TYK21320.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 6.7e-32
Identity = 76/78 (97.44%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 103 MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 162
           MGEPICMTLVVA GNKILQKKGTVIFFFTFFRKHE LNLLYELGLEVGKASNSDGFKSLE
Sbjct: 1   MGEPICMTLVVATGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLE 60

Query: 163 TLPSSTIAATATEPSSSK 181
           TLPSSTIAATATEPSSSK
Sbjct: 61  TLPSSTIAATATEPSSSK 78

[Close]
BLAST of MELO3C030757 vs. NCBI nr
Match: TYK21842.1 (pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 6.7e-32
Identity = 76/78 (97.44%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 103 MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 162
           MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHE LNLLYELGLEVGKASNSDGFKSLE
Sbjct: 1   MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLE 60

Query: 163 TLPSSTIAATATEPSSSK 181
           TLPSSTIA TATEPSSSK
Sbjct: 61  TLPSSTIATTATEPSSSK 78

[Close]
BLAST of MELO3C030757 vs. NCBI nr
Match: XP_016902821.1 (PREDICTED: uncharacterized protein LOC103500480 isoform X2 [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-30
Identity = 84/131 (64.12%), Postives = 95/131 (72.52%), Query Frame = 0 

Query: 53  SSYQLPAFN---RSSFSIYSLSSSPKSLNLQSSLLLRSLRSSLRRFGRVSEEDMGEPICM 112
           S++  P F+   +  + +Y      K    +   +L   +   R+   VS EDMGEPICM
Sbjct: 19  SNFHSPQFHLKLKFPYFLYVSLEVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICM 78

Query: 113 TLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLETLPSSTI 172
           TLVVAAGNKILQKKGTVIFFFTFFRKHE LN LYELGL+VGKASN DGFKSLETL SSTI
Sbjct: 79  TLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI 138

Query: 173 AATATEPSSSK 181
           AATATEPSSSK
Sbjct: 139 AATATEPSSSK 149

[Close]
BLAST of MELO3C030757 vs. NCBI nr
Match: XP_008462005.1 (PREDICTED: uncharacterized protein LOC103500480 isoform X1 [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-30
Identity = 84/131 (64.12%), Postives = 95/131 (72.52%), Query Frame = 0 

Query: 53  SSYQLPAFN---RSSFSIYSLSSSPKSLNLQSSLLLRSLRSSLRRFGRVSEEDMGEPICM 112
           S++  P F+   +  + +Y      K    +   +L   +   R+   VS EDMGEPICM
Sbjct: 19  SNFHSPQFHLKLKFPYFLYVSLEVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICM 78

Query: 113 TLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLETLPSSTI 172
           TLVVAAGNKILQKKGTVIFFFTFFRKHE LN LYELGL+VGKASN DGFKSLETL SSTI
Sbjct: 79  TLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI 138

Query: 173 AATATEPSSSK 181
           AATATEPSSSK
Sbjct: 139 AATATEPSSSK 149

[Close]
BLAST of MELO3C030757 vs. ExPASy Swiss-Prot
Match: Q8RXA8 (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea OX=3562 GN=NDK4 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.7e-06
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 244 YMLQEQEAHAAEFERTFIAIKPDGVQRGL 273
           Y+LQ+QEA AAEFERTFIAIKPDGVQRGL
Sbjct: 73  YLLQDQEACAAEFERTFIAIKPDGVQRGL 101

[Close]
BLAST of MELO3C030757 vs. ExPASy Swiss-Prot
Match: Q8LAH8 (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDK4 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.1e-05
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 244 YMLQEQEAHAAEFERTFIAIKPDGVQRGL 273
           +MLQ+QEA AAE ERTFIAIKPDGVQRGL
Sbjct: 75  FMLQDQEALAAEMERTFIAIKPDGVQRGL 103

[Close]
BLAST of MELO3C030757 vs. ExPASy Swiss-Prot
Match: O49203 (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDPK3 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-05
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 244 YMLQEQEAHAAEFERTFIAIKPDGVQRGL 273
           YM+Q+QE  AAE ERTFIAIKPDGVQRGL
Sbjct: 76  YMIQDQEVLAAEMERTFIAIKPDGVQRGL 104

[Close]
BLAST of MELO3C030757 vs. ExPASy TrEMBL
Match: A0A5D3CF18 (Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001190 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-35
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 103 MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 162
           MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE
Sbjct: 1   MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 60

Query: 163 TLPSSTIAATATEPSSSKALLQ 185
           TLPSSTIAATATEPSSSKALLQ
Sbjct: 61  TLPSSTIAATATEPSSSKALLQ 82

[Close]
BLAST of MELO3C030757 vs. ExPASy TrEMBL
Match: A0A5A7T0H4 (Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00290 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-32
Identity = 76/78 (97.44%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 103 MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 162
           MGEPICMTLVVA GNKILQKKGTVIFFFTFFRKHE LNLLYELGLEVGKASNSDGFKSLE
Sbjct: 1   MGEPICMTLVVATGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLE 60

Query: 163 TLPSSTIAATATEPSSSK 181
           TLPSSTIAATATEPSSSK
Sbjct: 61  TLPSSTIAATATEPSSSK 78

[Close]
BLAST of MELO3C030757 vs. ExPASy TrEMBL
Match: A0A5D3DE30 (Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1073G00040 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-32
Identity = 76/78 (97.44%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 103 MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 162
           MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHE LNLLYELGLEVGKASNSDGFKSLE
Sbjct: 1   MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLE 60

Query: 163 TLPSSTIAATATEPSSSK 181
           TLPSSTIA TATEPSSSK
Sbjct: 61  TLPSSTIATTATEPSSSK 78

[Close]
BLAST of MELO3C030757 vs. ExPASy TrEMBL
Match: A0A1S4E3L4 (uncharacterized protein LOC103500480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500480 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 6.1e-31
Identity = 84/131 (64.12%), Postives = 95/131 (72.52%), Query Frame = 0 

Query: 53  SSYQLPAFN---RSSFSIYSLSSSPKSLNLQSSLLLRSLRSSLRRFGRVSEEDMGEPICM 112
           S++  P F+   +  + +Y      K    +   +L   +   R+   VS EDMGEPICM
Sbjct: 19  SNFHSPQFHLKLKFPYFLYVSLEVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICM 78

Query: 113 TLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLETLPSSTI 172
           TLVVAAGNKILQKKGTVIFFFTFFRKHE LN LYELGL+VGKASN DGFKSLETL SSTI
Sbjct: 79  TLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI 138

Query: 173 AATATEPSSSK 181
           AATATEPSSSK
Sbjct: 139 AATATEPSSSK 149

[Close]
BLAST of MELO3C030757 vs. ExPASy TrEMBL
Match: A0A1S3CFU5 (uncharacterized protein LOC103500480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500480 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 6.1e-31
Identity = 84/131 (64.12%), Postives = 95/131 (72.52%), Query Frame = 0 

Query: 53  SSYQLPAFN---RSSFSIYSLSSSPKSLNLQSSLLLRSLRSSLRRFGRVSEEDMGEPICM 112
           S++  P F+   +  + +Y      K    +   +L   +   R+   VS EDMGEPICM
Sbjct: 19  SNFHSPQFHLKLKFPYFLYVSLEVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICM 78

Query: 113 TLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLETLPSSTI 172
           TLVVAAGNKILQKKGTVIFFFTFFRKHE LN LYELGL+VGKASN DGFKSLETL SSTI
Sbjct: 79  TLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI 138

Query: 173 AATATEPSSSK 181
           AATATEPSSSK
Sbjct: 139 AATATEPSSSK 149

[Close]
BLAST of MELO3C030757 vs. TAIR 10
Match: AT4G23900.1 (Nucleoside diphosphate kinase family protein )

HSP 1 Score: 52.4 bits (124), Expect = 7.9e-07
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 244 YMLQEQEAHAAEFERTFIAIKPDGVQRGL 273
           +MLQ+QEA AAE ERTFIAIKPDGVQRGL
Sbjct: 75  FMLQDQEALAAEMERTFIAIKPDGVQRGL 103

[Close]
BLAST of MELO3C030757 vs. TAIR 10
Match: AT4G23895.3 (Pleckstrin homology (PH) domain-containing protein )

HSP 1 Score: 52.4 bits (124), Expect = 7.9e-07
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 244 YMLQEQEAHAAEFERTFIAIKPDGVQRGL 273
           +MLQ+QEA AAE ERTFIAIKPDGVQRGL
Sbjct: 305 FMLQDQEALAAEMERTFIAIKPDGVQRGL 333

[Close]
BLAST of MELO3C030757 vs. TAIR 10
Match: AT4G11010.1 (nucleoside diphosphate kinase 3 )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 244 YMLQEQEAHAAEFERTFIAIKPDGVQRGL 273
           YM+Q+QE  AAE ERTFIAIKPDGVQRGL
Sbjct: 76  YMIQDQEVLAAEMERTFIAIKPDGVQRGL 104

The following BLAST results are available for this feature:
BLAST of MELO3C030757 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037864.14.9e-35100.00pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa] >TYK09818... [more]
KAA0034965.16.7e-3297.44pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa] >TYK21320... [more]
TYK21842.16.7e-3297.44pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa][more]
XP_016902821.11.3e-3064.12PREDICTED: uncharacterized protein LOC103500480 isoform X2 [Cucumis melo][more]
XP_008462005.11.3e-3064.12PREDICTED: uncharacterized protein LOC103500480 isoform X1 [Cucumis melo][more]
BLAST of MELO3C030757 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RXA81.7e-0689.66Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea OX=3562 GN=N... [more]
Q8LAH81.1e-0586.21Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis tha... [more]
O492031.9e-0582.76Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis th... [more]
BLAST of MELO3C030757 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CF182.4e-35100.00Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7T0H43.2e-3297.44Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3DE303.2e-3297.44Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4E3L46.1e-3164.12uncharacterized protein LOC103500480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CFU56.1e-3164.12uncharacterized protein LOC103500480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of MELO3C030757 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23900.17.9e-0786.21Nucleoside diphosphate kinase family protein [more]
AT4G23895.37.9e-0786.21Pleckstrin homology (PH) domain-containing protein [more]
AT4G11010.11.3e-0682.76nucleoside diphosphate kinase 3 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030757.1MELO3C030757.1mRNA