MELO3C030712.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C030712.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptiontRNA_int_end_N2 domain-containing protein
Locationchr04: 28924899 .. 28927326 (+)
RNA-Seq ExpressionMELO3C030712.jh1
SyntenyMELO3C030712.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTGATATTTGATTCGGAGGTATCTGATGGAGGCTACAGATTCGGAAAGCTCATCGGGAGGGCTAGTGGTGATGACGACAATTACGAGCAAGACATAAAAGATGAAGAAGAATGTCTCTTTGCATCTGTGTACTTGCGCAAGCTGCAGTTTAGGTTGAGAATTTCAAGAATTTGAACTCCTCCAAATCCTTCAATAGGATGATTCTATTTGCTTATTATCAAGTGTTTGTTTCAATAATTTATCTGTCTCTCTAGGAAGCATGCTTCAACTGCTCGATGGAATGATCGAATGGGGATAACAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACGACGACTGGCATTGTAGGTTGTGGCAAGATTTATTGTTCCATTGAGGAAACTTTGTAGGTTAACGTTAAACTATGATTTTGTAATGGTTTTGTTATCCATCCCTATTGAGTTTGATATTGACCACAACATCTTTTAGGGACTTTTAACTTAATTTGATTTGAAAATAGTAGGGTAAATCATGATCAAGCAAAACTTTTGGAAGTGTTCCAAGCCAAGGCCAGGAAATGGGCCATGAGGTGAAGAGAGCTGCATTAGGTGCATCTTGGAAATTACCTTGGTCACCTCGTGGTTATTTTTTTTATTCCTTTTTGGTTGTCTTTGGGGTTGTATGTACAATATTGCATTATGAATAAAGGAAAGGAAATCAAACTTGAAATATACAAGAGGAAGCACTAGTAGCATTTTGTGTCTTAGTAAAGATAGGAAGTCATCAATTTTGAAGTGTCTTTTCAACTATTCTTTTCTCTTATCTCTATCTCTTGAAAATAAGTAGCATCAATGAAATTTTATGAAGTTTATTTGTGTACTATATAATTCACTTATGTATCACTTATTCTTCTTTTCTATTTACAATATATATATATATATCTTCTAGTCTATTTACAATAAATATGCACACCTATTGTTTTACATTCACTTAGACAATGTTTTTCCTAATATTTTTATTGTGTCTTGTTTTAGGAAAGTTATTGTGTTGCCTTAAAGTGTATCTTCTATTTCGTAAATGTTGATGGTAATATGAACCTCAGCTCAAAAGTAGTTGTACTATTGAAGCCGAAAGTATCCTCTTTTTTATTTTATTAATAAAGATATTAAGGATCATAATCTCTTTTGAGACGTACAGATGACAATTTTTTTGCATGCTCTCAATTTCTTTTCTATATTTTCAGATTTCCTTTTGAAATTGGGGCTTTACGTATTTTGGATCATGATAATTCAAGTCTCTCTTTGAAAGATGTATATAAGAAAGTAGCTGAAGGTAAAAAAAGGGGGTGTCTTTGGGAGCAGTTTGAGGTTTATAGGCACTTCAAATCTCTTGTTTTCATTGTTGGAAAGCATAAGTTCCTTGGTCTCTGAAGAGTGTTAGGGATGGCAGTGACGTTTCATCTCCAAGTTCTATTGAAAACAAAAGAGCAAGAGAAGATGAGAGGTTGATCTCTGAACTATTAGATACCACTCGGCTCGATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAACAAATTTAGAAAGTCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACTAGGTAAGTTCACTTGTTATAAAAAAAATCCATGCAACTTCTTTCTTAGTCCCTCGTTAGGGTTTTTTATTTTTTTTATTATTGACCTTTTATAATTTTAATTTTGAACTACTTGGCAAGGCATTATTAATTTATTTGCATCTCAGTTGACTTTTTAATAGTTTTCTTAATCTAAAGGAGTTCTACTCTCAACCTCAACCCCAAGTAGAGGACACATTTTTACAGATCCTAAGATAGTGCGCAGTATAACTTTTGTGTTCAAATTTTGTATGTTACACCTGCGTTCCTTGTGGAAAAGGTGTTTTTCAAGTGAATGTGGCACGTATGATGGAAGCTGTGTTGGAAGAACATTAGTTAAATGCTTCCTCTGTAAGCACTCTATGTACTTTTTGTTAACTTTTGGAATTCCTCAAACTACTTTTGATTATTGATAAGTTTATAAATGCTTTTAGTTGGTCAAAAACACTTTAGTCCGTACCGCTCTAATATTTTAACCAAATGCTACCGTTCTTGAAAACTTTCAGTCATCCATGAAAACTTCAAAAACACACTTAGATTAGTACTCAATTTTATGGTTGTGAAATTGTTTAGGCAGTGTATCAATTTCATTTTTAGCCATTATTTTAATCCAAATTCCAATAATAGGCTTCAACATGTGTTGTTTCTTTCTTCTAGAATATTCCATGCATTACTTTAAAAGATATTGAAGTTCTTGAGAGAACATCTAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGACGTGTCTGTTTCTTTTCGTTTGATAATGTGCAGCTTCCTATCTTACCTTGA

mRNA sequence

GTTTTGATATTTGATTCGGAGGTATCTGATGGAGGCTACAGATTCGGAAAGCTCATCGGGAGGGCTAGTGGTGATGACGACAATTACGAGCAAGACATAAAAGATGAAGAAGAATGTCTCTTTGCATCTGTGTACTTGCGCAAGCTGCAGTTTAGGAAGCATGCTTCAACTGCTCGATGGAATGATCGAATGGGGATAACAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACGACGACTGGCATTGTAGGTTGTGGCAAGATTTATTGTTCCATTGAGGAAACTTTATTTCCTTTTGAAATTGGGGCTTTACGTATTTTGGATCATGATAATTCAAGTCTCTCTTTGAAAGATGTATATAAGAAAGTAGCTGAAGGTAAAAAAAGGGGGTGTCTTTGGGAGCAGTTTGAGGTTTATAGGCACTTCAAATCTCTTGTTTTCATTGTTGGAAAGCATAAGTTCCTTGGTCTCTGAAGAGTGTTAGGGATGGCAGTGACGTTTCATCTCCAAGTTCTATTGAAAACAAAAGAGCAAGAGAAGATGAGAGGTTGATCTCTGAACTATTAGATACCACTCGGCTCGATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAACAAATTTAGAAAGTCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACTAGAATATTCCATGCATTACTTTAAAAGATATTGAAGTTCTTGAGAGAACATCTAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGACGTGTCTGTTTCTTTTCGTTTGATAATGTGCAGCTTCCTATCTTACCTTGA

Coding sequence (CDS)

ATGGGGATAACAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACGACGACTGGCATTGTAGGTTGTGGCAAGATTTATTGTTCCATTGAGGAAACTTTATTTCCTTTTGAAATTGGGGCTTTACGTATTTTGGATCATGATAATTCAAGTCTCTCTTTGAAAGATGTATATAAGAAAGTAGCTGAAGGTAAAAAAAGGGGGTGTCTTTGGGAGCAGTTTGAGGTTTATAGGCACTTCAAATCTCTTGTTTTCATTGTTGGAAAGCATAAGTTCCTTGGTCTCTGA

Protein sequence

MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKVAEGKKRGCLWEQFEVYRHFKSLVFIVGKHKFLGL
Homology
[Close]
BLAST of MELO3C030712.jh1 vs. NCBI nr
Match: XP_038883355.1 (uncharacterized protein LOC120074337 [Benincasa hispida] >XP_038883356.1 uncharacterized protein LOC120074337 [Benincasa hispida] >XP_038883357.1 uncharacterized protein LOC120074337 [Benincasa hispida])

HSP 1 Score: 161 bits (407), Expect = 4.12e-47
Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLENKGSLWTTTGIV CGKIYCSIEETLF  E+GAL +LDHDNSSLSL+DVYKK+
Sbjct: 55  MGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLEDVYKKI 114

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEGK  GCLWEQFEVYRH KSL FIVGKHK
Sbjct: 115 AEGKN-GCLWEQFEVYRHLKSLGFIVGKHK 143

[Close]
BLAST of MELO3C030712.jh1 vs. NCBI nr
Match: XP_022156818.1 (uncharacterized protein LOC111023660 [Momordica charantia])

HSP 1 Score: 160 bits (405), Expect = 8.26e-47
Identity = 76/90 (84.44%), Postives = 80/90 (88.89%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLEN+GSLWTTTGIV CGKIYCS EETLF  E+GAL +LDHDNSSLSLKDVYKKV
Sbjct: 55  MGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDHDNSSLSLKDVYKKV 114

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEGK  GCLWEQFEVYRH KSL FIVGKHK
Sbjct: 115 AEGKN-GCLWEQFEVYRHLKSLGFIVGKHK 143

[Close]
BLAST of MELO3C030712.jh1 vs. NCBI nr
Match: XP_016902999.1 (PREDICTED: uncharacterized protein LOC103501474 [Cucumis melo])

HSP 1 Score: 157 bits (398), Expect = 1.08e-45
Identity = 73/90 (81.11%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLENKGSLWTTTGIV CGKIYC+IEETLF  E+GAL +LDHDNS+LSLKDVYKKV
Sbjct: 57  MGMAEVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKV 116

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEG+  GC+WEQFEVYRH KSL +IVGKHK
Sbjct: 117 AEGRS-GCIWEQFEVYRHLKSLGYIVGKHK 145

[Close]
BLAST of MELO3C030712.jh1 vs. NCBI nr
Match: KAG7028441.1 (tRNA-splicing endonuclease subunit Sen54 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157 bits (397), Expect = 1.33e-45
Identity = 74/90 (82.22%), Postives = 80/90 (88.89%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLENKGSLWTT+GIV CGKIYCSIEETLF  E+GAL +LDHDNSSLSLKDVYKKV
Sbjct: 55  MGMAEVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKV 114

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEGK   C+WEQFEVYRH KSL +IVGKHK
Sbjct: 115 AEGKSE-CIWEQFEVYRHLKSLGYIVGKHK 143

[Close]
BLAST of MELO3C030712.jh1 vs. NCBI nr
Match: XP_022973340.1 (tRNA-splicing endonuclease subunit Sen54 isoform X3 [Cucurbita maxima] >XP_022973341.1 tRNA-splicing endonuclease subunit Sen54 isoform X3 [Cucurbita maxima])

HSP 1 Score: 157 bits (397), Expect = 1.33e-45
Identity = 74/90 (82.22%), Postives = 80/90 (88.89%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLENKGSLWTT+GIV CGKIYCSIEETLF  E+GAL +LDHDNSSLSLKDVYKKV
Sbjct: 55  MGMAEVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKV 114

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEGK   C+WEQFEVYRH KSL +IVGKHK
Sbjct: 115 AEGKSE-CIWEQFEVYRHLKSLGYIVGKHK 143

[Close]
BLAST of MELO3C030712.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DRN3 (uncharacterized protein LOC111023660 OS=Momordica charantia OX=3673 GN=LOC111023660 PE=3 SV=1)

HSP 1 Score: 160 bits (405), Expect = 4.00e-47
Identity = 76/90 (84.44%), Postives = 80/90 (88.89%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLEN+GSLWTTTGIV CGKIYCS EETLF  E+GAL +LDHDNSSLSLKDVYKKV
Sbjct: 55  MGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDHDNSSLSLKDVYKKV 114

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEGK  GCLWEQFEVYRH KSL FIVGKHK
Sbjct: 115 AEGKN-GCLWEQFEVYRHLKSLGFIVGKHK 143

[Close]
BLAST of MELO3C030712.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E447 (uncharacterized protein LOC103501474 OS=Cucumis melo OX=3656 GN=LOC103501474 PE=3 SV=1)

HSP 1 Score: 157 bits (398), Expect = 5.22e-46
Identity = 73/90 (81.11%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLENKGSLWTTTGIV CGKIYC+IEETLF  E+GAL +LDHDNS+LSLKDVYKKV
Sbjct: 57  MGMAEVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKV 116

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEG+  GC+WEQFEVYRH KSL +IVGKHK
Sbjct: 117 AEGRS-GCIWEQFEVYRHLKSLGYIVGKHK 145

[Close]
BLAST of MELO3C030712.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I8D9 (tRNA-splicing endonuclease subunit Sen54 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111471897 PE=3 SV=1)

HSP 1 Score: 157 bits (397), Expect = 6.45e-46
Identity = 74/90 (82.22%), Postives = 80/90 (88.89%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLENKGSLWTT+GIV CGKIYCSIEETLF  E+GAL +LDHDNSSLSLKDVYKKV
Sbjct: 55  MGMAEVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKV 114

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEGK   C+WEQFEVYRH KSL +IVGKHK
Sbjct: 115 AEGKSE-CIWEQFEVYRHLKSLGYIVGKHK 143

[Close]
BLAST of MELO3C030712.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FKK4 (tRNA-splicing endonuclease subunit Sen54 OS=Cucurbita moschata OX=3662 GN=LOC111446255 PE=3 SV=1)

HSP 1 Score: 157 bits (397), Expect = 6.45e-46
Identity = 74/90 (82.22%), Postives = 80/90 (88.89%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLENKGSLWTT+GIV CGKIYCSIEETLF  E+GAL +LDHDNSSLSLKDVYKKV
Sbjct: 55  MGMAEVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKV 114

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEGK   C+WEQFEVYRH KSL +IVGKHK
Sbjct: 115 AEGKSE-CIWEQFEVYRHLKSLGYIVGKHK 143

[Close]
BLAST of MELO3C030712.jh1 vs. ExPASy TrEMBL
Match: A0A6J1ICR8 (tRNA-splicing endonuclease subunit Sen54 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471897 PE=3 SV=1)

HSP 1 Score: 157 bits (397), Expect = 7.19e-46
Identity = 74/90 (82.22%), Postives = 80/90 (88.89%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRILDHDNSSLSLKDVYKKV 60
           MG+ EVLENKGSLWTT+GIV CGKIYCSIEETLF  E+GAL +LDHDNSSLSLKDVYKKV
Sbjct: 59  MGMAEVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKV 118

Query: 61  AEGKKRGCLWEQFEVYRHFKSLVFIVGKHK 90
           AEGK   C+WEQFEVYRH KSL +IVGKHK
Sbjct: 119 AEGKSE-CIWEQFEVYRHLKSLGYIVGKHK 147

[Close]
BLAST of MELO3C030712.jh1 vs. TAIR 10
Match: AT3G57360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits to 122 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21
Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 1   MGITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRIL-DHDNSSLSLKDVYKK 60
           +G+ EV   +G LWTTTGI+  GK YC IEE L+  EIG L+IL + D+  + LKD+Y+K
Sbjct: 50  LGMAEVEVKRGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILGNEDDIVIPLKDLYEK 109

Query: 61  VAEGKKRGCLWEQFEVYRHFKSLVFIVGKH 90
           +AE +K GC WE +EVYR+ K L +I+G+H
Sbjct: 110 IAE-EKSGCSWENYEVYRYLKGLGYILGRH 138

[Close]
BLAST of MELO3C030712.jh1 vs. TAIR 10
Match: AT3G02370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57360.1); Has 95 Blast hits to 95 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-21
Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 0 

Query: 3  ITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRIL-DHDNSSLSLKDVYKKVA 62
          + EV   +G LWTTTGI+  GK YC IEE L+  EIG L++L D D+  +SLKD+Y ++A
Sbjct: 1  MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60

Query: 63 EGKKRGCLWEQFEVYRHFKSLVFIVGKH 90
          EG K GC WE +EVYR+ K L +I+G+H
Sbjct: 61 EG-KYGCCWENYEVYRYLKGLGYILGRH 87

[Close]
BLAST of MELO3C030712.jh1 vs. TAIR 10
Match: AT3G02370.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57360.1). )

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-21
Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 0 

Query: 3  ITEVLENKGSLWTTTGIVGCGKIYCSIEETLFPFEIGALRIL-DHDNSSLSLKDVYKKVA 62
          + EV   +G LWTTTGI+  GK YC IEE L+  EIG L++L D D+  +SLKD+Y ++A
Sbjct: 1  MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60

Query: 63 EGKKRGCLWEQFEVYRHFKSLVFIVGKH 90
          EG K GC WE +EVYR+ K L +I+G+H
Sbjct: 61 EG-KYGCCWENYEVYRYLKGLGYILGRH 87

The following BLAST results are available for this feature:
BLAST of MELO3C030712.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883355.14.12e-4784.44uncharacterized protein LOC120074337 [Benincasa hispida] >XP_038883356.1 unchara... [more]
XP_022156818.18.26e-4784.44uncharacterized protein LOC111023660 [Momordica charantia][more]
XP_016902999.11.08e-4581.11PREDICTED: uncharacterized protein LOC103501474 [Cucumis melo][more]
KAG7028441.11.33e-4582.22tRNA-splicing endonuclease subunit Sen54 [Cucurbita argyrosperma subsp. argyrosp... [more]
XP_022973340.11.33e-4582.22tRNA-splicing endonuclease subunit Sen54 isoform X3 [Cucurbita maxima] >XP_02297... [more]
BLAST of MELO3C030712.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030712.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DRN34.00e-4784.44uncharacterized protein LOC111023660 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A1S4E4475.22e-4681.11uncharacterized protein LOC103501474 OS=Cucumis melo OX=3656 GN=LOC103501474 PE=... [more]
A0A6J1I8D96.45e-4682.22tRNA-splicing endonuclease subunit Sen54 isoform X3 OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1FKK46.45e-4682.22tRNA-splicing endonuclease subunit Sen54 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1ICR87.19e-4682.22tRNA-splicing endonuclease subunit Sen54 isoform X2 OS=Cucurbita maxima OX=3661 ... [more]
BLAST of MELO3C030712.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G57360.11.3e-2152.22unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G02370.11.7e-2153.41unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G02370.21.7e-2153.41unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024337tRNA-splicing endonuclease, subunit Sen54PANTHERPTHR21027TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54coord: 2..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030712.jh1.t1MELO3C030712.jh1.t1mRNA