MELO3C030683 (gene) Melon (DHL92) v4

Overview
NameMELO3C030683
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDUF4218 domain-containing protein
Locationchr07: 14777931 .. 14778205 (-)
RNA-Seq ExpressionMELO3C030683
SyntenyMELO3C030683
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAGGAGATGAGAAAATCATCAGAAGATGGATCTGAATCAATACTAGAGACAATTATTTGTGAACAGGTTTTGGGAAAATGTTTAAGCCATACTAAAGGTCTTAGATGGAAGACAACCCCCAATATAGGAACACATGATACATCGACCTGTGTGTTTGAGAAAGATATTGGGGATAAGTATGAAAAGCTTCAGGCAAATGGGATAAACTTAAAGAAGGAAAATGTCATGTTGAAGTCAACAATTTCGGACTTCTAAGATCAATTAACTAA

mRNA sequence

ATGCAAAAGGAGATGAGAAAATCATCAGAAGATGGATCTGAATCAATACTAGAGACAATTATTTGTGAACAGGTTTTGGGAAAATGTTTAAGCCATACTAAAGGTCTTAGATGGAAGACAACCCCCAATATAGGAACACATGATACATCGACCTGTGTGTTTGAGAAAGATATTGGGGATAAGTATGAAAAGCTTCAGGCAAATGGGATAAACTTAAAGAAGGAAAATGTCATGTTGAAGTCAACAATTTCGGACTTCTAAGATCAATTAACTAA

Coding sequence (CDS)

ATGCAAAAGGAGATGAGAAAATCATCAGAAGATGGATCTGAATCAATACTAGAGACAATTATTTGTGAACAGGTTTTGGGAAAATGTTTAAGCCATACTAAAGGTCTTAGATGGAAGACAACCCCCAATATAGGAACACATGATACATCGACCTGTGTGTTTGAGAAAGATATTGGGGATAAGTATGAAAAGCTTCAGGCAAATGGGATAAACTTAAAGAAGGAAAATGTCATGTTGAAGTCAACAATTTCGGACTTCTAA

Protein sequence

MQKEMRKSSEDGSESILETIICEQVLGKCLSHTKGLRWKTTPNIGTHDTSTCVFEKDIGDKYEKLQANGINLKKENVMLKSTISDF
Homology
[Close]
BLAST of MELO3C030683 vs. NCBI nr
Match: KAA0055007.1 (uncharacterized protein E6C27_scaffold43052G001590 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 1.8e-16
Identity = 51/76 (67.11%), Postives = 58/76 (76.32%), Query Frame = 0 

Query: 1   MQKEMRKSSEDGSESILETIICEQVLGKCLSHTKGLRWKTTPNIGTHDTSTCVFEKDIGD 60
           MQ+E+RKSSEDG++   + II EQVL K   HTKGL WK TPN+ T  TST VFEKDIGD
Sbjct: 242 MQEEIRKSSEDGAQPTPKKIIYEQVLEKRSGHTKGLGWKATPNVAT-CTSTHVFEKDIGD 301

Query: 61  KYEKLQANGINLKKEN 77
           KYEKLQ   INLK+EN
Sbjct: 302 KYEKLQTKVINLKEEN 316

[Close]
BLAST of MELO3C030683 vs. ExPASy TrEMBL
Match: A0A5A7UKB8 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001590 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.8e-17
Identity = 51/76 (67.11%), Postives = 58/76 (76.32%), Query Frame = 0 

Query: 1   MQKEMRKSSEDGSESILETIICEQVLGKCLSHTKGLRWKTTPNIGTHDTSTCVFEKDIGD 60
           MQ+E+RKSSEDG++   + II EQVL K   HTKGL WK TPN+ T  TST VFEKDIGD
Sbjct: 242 MQEEIRKSSEDGAQPTPKKIIYEQVLEKRSGHTKGLGWKATPNVAT-CTSTHVFEKDIGD 301

Query: 61  KYEKLQANGINLKKEN 77
           KYEKLQ   INLK+EN
Sbjct: 302 KYEKLQTKVINLKEEN 316

The following BLAST results are available for this feature:
BLAST of MELO3C030683 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0055007.11.8e-1667.11uncharacterized protein E6C27_scaffold43052G001590 [Cucumis melo var. makuwa][more]
BLAST of MELO3C030683 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030683 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UKB88.8e-1767.11DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of MELO3C030683 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030683.1MELO3C030683.1mRNA