MELO3C030674 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030674
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr04: 24530658 .. 24530822 (+)
RNA-Seq Expression	MELO3C030674
Synteny	MELO3C030674

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTCACGAACAAGCCCGCTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCGCGCAAGCCCATCCGAGCATCAACTCGACACCCGCTCTCACTCCCTGCCCGATGGACAAGCCCATCGTTATGGCCAAACCCCTCCACCAAGCAAGAAGCAATCGCAA

mRNA sequence

ATCTTCACGAACAAGCCCGCTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCGCGCAAGCCCATCCGAGCATCAACTCGACACCCGCTCTCACTCCCTGCCCGATGGACAAGCCCATCGTTATGGCCAAACCCCTCCACCAAGCAAGAAGCAATCGCAA

Coding sequence (CDS)

ATCTTCACGAACAAGCCCGCTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCGCGCAAGCCCATCCGAGCATCAACTCGACACCCGCTCTCACTCCCTGCCCGATGGACAAGCCCATCGTTATGGCCAAACCCCTCCACCAAGCAAGAAGCAATCGCAA

Protein sequence

IFTNKPAWSARPHRGASIVRASPSEHQLDTRSHSLPDGQAHRYGQTPPPSKKQSQ

Homology

[Close]

BLAST of MELO3C030674 vs. NCBI nr
Match: TYK03168.1 (hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 1   IFTNKPAWSARPHRGASIVRASPSEHQLDTRSHSLPDGQAHRYGQTPPPSKKQS 55
           IFTNK      P+RGASIVRASPSEHQLDTRSHSLPDGQA+RYGQ+ PPS KQS
Sbjct: 340 IFTNKARLECTPNRGASIVRASPSEHQLDTRSHSLPDGQAYRYGQSLPPSTKQS 393

[Close]

BLAST of MELO3C030674 vs. ExPASy TrEMBL
Match: A0A5D3BW21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00500 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.8e-14
Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 1   IFTNKPAWSARPHRGASIVRASPSEHQLDTRSHSLPDGQAHRYGQTPPPSKKQS 55
           IFTNK      P+RGASIVRASPSEHQLDTRSHSLPDGQA+RYGQ+ PPS KQS
Sbjct: 340 IFTNKARLECTPNRGASIVRASPSEHQLDTRSHSLPDGQAYRYGQSLPPSTKQS 393

The following BLAST results are available for this feature:

BLAST of MELO3C030674 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03168.1	1.2e-13	79.63	hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C030674 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C030674 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BW21	5.8e-14	79.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C030674 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030674.1	MELO3C030674.1	mRNA