Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCGAATGCACTGCATCCGAGAGAGCGAGCGCCAACGACGCGGCCCGCAATGACAACCGAAGATGTCAAGGCGGAACGCGATGCGGGCTATCGGGTTCGTTGTCCACCCAAAGATGGGTGTCGACAGAAAGGGGCCAACGGGACGCGACGCTTCCATCGA mRNA sequence
ATGCCACCGAATGCACTGCATCCGAGAGAGCGAGCGCCAACGACGCGGCCCGCAATGACAACCGAAGATGTCAAGGCGGAACGCGATGCGGGCTATCGGGTTCGTTGTCCACCCAAAGATGGGTGTCGACAGAAAGGGGCCAACGGGACGCGACGCTTCCATCGA Coding sequence (CDS)
ATGCCACCGAATGCACTGCATCCGAGAGAGCGAGCGCCAACGACGCGGCCCGCAATGACAACCGAAGATGTCAAGGCGGAACGCGATGCGGGCTATCGGGTTCGTTGTCCACCCAAAGATGGGTGTCGACAGAAAGGGGCCAACGGGACGCGACGCTTCCATCGA Protein sequence
MPPNALHPRERAPTTRPAMTTEDVKAERDAGYRVRCPPKDGCRQKGANGTRRFHR
Homology
BLAST of MELO3C030673 vs. NCBI nr
Match:
TYK03168.1 (hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa])
HSP 1 Score: 59.7 bits (143), Expect = 9.2e-06
Identity = 31/43 (72.09%), Postives = 32/43 (74.42%), Query Frame = 0
Query: 1 MPPNALHPRERAPTTRPAMTTEDVKAERDAGYRVRCPPKDGCR 44 MPPNALHPRERA TTRP MTT+DVK E DAGYR GCR Sbjct: 1 MPPNALHPRERAATTRPTMTTKDVKGELDAGYR-------GCR 36
BLAST of MELO3C030673 vs. ExPASy TrEMBL
Match:
A0A5D3BW21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00500 PE=4 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 4.4e-06
Identity = 31/43 (72.09%), Postives = 32/43 (74.42%), Query Frame = 0
Query: 1 MPPNALHPRERAPTTRPAMTTEDVKAERDAGYRVRCPPKDGCR 44 MPPNALHPRERA TTRP MTT+DVK E DAGYR GCR Sbjct: 1 MPPNALHPRERAATTRPTMTTKDVKGELDAGYR-------GCR 36
The following BLAST results are available for this feature:
Match Name E-value Identity Description
TYK03168.1 9.2e-06 72.09 hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5D3BW21 4.4e-06 72.09 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
A T G C C A C C G A A T G C A C T G C A T C C G A G A G A G C G A G C G C C A A C G A C G C G G C C C G C A A T G A C A A C C G A A G A T G T C A A G G C G G A A C G C G A T G C G G G C T A T C G G G T T C G T T G T C C A C C C A A A G A T G G G T G T C G A C A G A A A G G G G C C A A C G G G A C G C G A C G C T T C C A T C G A 20 40 60 80 100 120 140 160 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 21..40
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..55
Relationships
The following mRNA feature(s) are a part of this gene: