MELO3C030509 (gene) Melon (DHL92) v4

Overview
NameMELO3C030509
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionPolyprotein
Locationchr01: 26008632 .. 26009188 (-)
RNA-Seq ExpressionMELO3C030509
SyntenyMELO3C030509
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAATACAATAACTCTCAAAAAGGATCAAGTACTGATGAGCTTCTTGAAGAACTGACAAGGAAGCTTTCAGAAATATCCATTTCTAAGGAACACATAGGAACCTCGTCCAAAAAAGAAATTAGTAATTTTGGAATGGGAAGCCTCAATACAATCAGCTATGGTTCTCCAAAAATTCTTCCTATCAAGGTTTACAACACTGATATGAAGAATCATTATAAAAGGCCATCACCACAAGATCTTAGATGGGATGATTTATGCCTAGATTTTCAATCATTTGATGGAAATAATATCGAAACTTGGAACAATGATGGATGTTCTAAAGGACAGATGATGATCATTTTTCAAGAAATGTTTGTTGCTACAACAATCTATCTCAAAAGAATGAATCAAAGAGAGATTGTTGACGCCTAACTGCAGGGCTTACAAGAAAACCTTAGGAGTTGGTGGCACAATCATCTTACTGATGCAAATAGAGAAGCCATAAAGGATGTTGTTTTGGAAAAAACAGAACAAGGACCTAATGGCGACGTTGTTACCATCCAGCCAAATTCAGTAA

mRNA sequence

TAAATACAATAACTCTCAAAAAGGATCAAGTACTGATGAGCTTCTTGAAGAACTGACAAGGAAGCTTTCAGAAATATCCATTTCTAAGGAACACATAGGAACCTCGTCCAAAAAAGAAATTAGTAATTTTGGAATGGGAAGCCTCAATACAATCAGCTATGGTTCTCCAAAAATTCTTCCTATCAAGGTTTACAACACTGATATGAAGAATCATTATAAAAGGCCATCACCACAAGATCTTAGATGGGATGATTTATGCCTAGATTTTCAATCATTTGATGGAAATAATATCGAAACTTGGAACAATGATGGATGTTCTAAAGGACAGATGATGATCATTTTTCAAGAAATGTTTGTTGCTACAACAATCTATCTCAAAAGAATGAATCAAAGAGAGATTGTTGACGCCTAACTGCAGGGCTTACAAGAAAACCTTAGGAGTTGGTGGCACAATCATCTTACTGATGCAAATAGAGAAGCCATAAAGGATGTTGTTTTGGAAAAAACAGAACAAGGACCTAATGGCGACGTTGTTACCATCCAGCCAAATTCAGTAA

Coding sequence (CDS)

AAATACAATAACTCTCAAAAAGGATCAAGTACTGATGAGCTTCTTGAAGAACTGACAAGGAAGCTTTCAGAAATATCCATTTCTAAGGAACACATAGGAACCTCGTCCAAAAAAGAAATTAGTAATTTTGGAATGGGAAGCCTCAATACAATCAGCTATGGTTCTCCAAAAATTCTTCCTATCAAGGTTTACAACACTGATATGAAGAATCATTATAAAAGGCCATCACCACAAGATCTTAGATGGGATGATTTATGCCTAGATTTTCAATCATTTGATGGAAATAATATCGAAACTTGGAACAATGATGGATGTTCTAAAGGACAGATGATGATCATTTTTCAAGAAATGTTTGTTGCTACAACAATCTATCTCAAAAGAATGAATCAAAGAGAGATTGTTGACGCCTAA

Protein sequence

KYNNSQKGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLKRMNQREIVDA
Homology
[Close]
BLAST of MELO3C030509 vs. NCBI nr
Match: KAA0049723.1 (polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 222.6 bits (566), Expect = 2.0e-54
Identity = 111/130 (85.38%), Postives = 117/130 (90.00%), Query Frame = 0 

Query: 7   KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNT 66
           KGSSTDELL+ELTRKLSE  ISKEH  TSSKKEISNFGMGSLNTISY SPK  PIKVYNT
Sbjct: 142 KGSSTDELLKELTRKLSETPISKEHARTSSKKEISNFGMGSLNTISYDSPKNFPIKVYNT 201

Query: 67  DMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLK 126
           +MKNHYKRPSP DL WDDL LDF+SFDGNNIETWN DGCS+GQMMIIFQEMFVA T YL+
Sbjct: 202 NMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDGCSEGQMMIIFQEMFVAATSYLR 261

Query: 127 RMNQREIVDA 137
           RM+QREIVDA
Sbjct: 262 RMSQREIVDA 271

[Close]
BLAST of MELO3C030509 vs. NCBI nr
Match: KAA0033915.1 (polyprotein [Cucumis melo var. makuwa] >TYK01297.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 222.6 bits (566), Expect = 2.0e-54
Identity = 111/129 (86.05%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 8   GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTD 67
           GSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNF MGSLNTISY SPKILPIK+YNTD
Sbjct: 38  GSSTDELLEELTRKLSETSISKENIGTSSKREVSNFEMGSLNTISYDSPKILPIKIYNTD 97

Query: 68  MKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLKR 127
           MKNHYKRPSP DL  DDL LDF+SFDGNNIETWN DGCS+GQMMIIFQEMFVA T YL+R
Sbjct: 98  MKNHYKRPSPPDLGCDDLRLDFRSFDGNNIETWNIDGCSEGQMMIIFQEMFVAATSYLRR 157

Query: 128 MNQREIVDA 137
           M+QREIVDA
Sbjct: 158 MSQREIVDA 166

[Close]
BLAST of MELO3C030509 vs. NCBI nr
Match: KAA0068152.1 (hypothetical protein E6C27_scaffold238G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 1.1e-52
Identity = 108/130 (83.08%), Postives = 118/130 (90.77%), Query Frame = 0 

Query: 7   KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNT 66
           KGSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNFGMG+LNTISY S KILPIKVYNT
Sbjct: 37  KGSSTDELLEELTRKLSETSISKENIGTSSKREVSNFGMGNLNTISYDSLKILPIKVYNT 96

Query: 67  DMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLK 126
           +MKNHYK+PSP DL WDDL  DF+SFD NNIETWN DGCS+GQM IIFQEMFVA T YL+
Sbjct: 97  NMKNHYKKPSPPDLGWDDLRPDFRSFDKNNIETWNIDGCSEGQMAIIFQEMFVAATSYLR 156

Query: 127 RMNQREIVDA 137
           RM+QREIVDA
Sbjct: 157 RMSQREIVDA 166

[Close]
BLAST of MELO3C030509 vs. NCBI nr
Match: TYK21071.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 1.1e-52
Identity = 108/130 (83.08%), Postives = 118/130 (90.77%), Query Frame = 0 

Query: 7   KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNT 66
           KGSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNFGMG+LNTISY S KILPIKVYNT
Sbjct: 37  KGSSTDELLEELTRKLSETSISKENIGTSSKREVSNFGMGNLNTISYDSLKILPIKVYNT 96

Query: 67  DMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLK 126
           +MKNHYK+PSP DL WDDL  DF+SFD NNIETWN DGCS+GQM IIFQEMFVA T YL+
Sbjct: 97  NMKNHYKKPSPPDLGWDDLRPDFRSFDKNNIETWNIDGCSEGQMAIIFQEMFVAATSYLR 156

Query: 127 RMNQREIVDA 137
           RM+QREIVDA
Sbjct: 157 RMSQREIVDA 166

[Close]
BLAST of MELO3C030509 vs. NCBI nr
Match: TYK23160.1 (hypothetical protein E5676_scaffold142G001850 [Cucumis melo var. makuwa])

HSP 1 Score: 177.9 bits (450), Expect = 5.7e-41
Identity = 94/129 (72.87%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 8   GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTD 67
           GSST ELLEELTRKLSE SIS+EHIGTSSK+E+ NFG+ SLNTISY SPKILPIKVYN D
Sbjct: 23  GSSTVELLEELTRKLSETSISEEHIGTSSKREVGNFGIRSLNTISYDSPKILPIKVYNND 82

Query: 68  MKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLKR 127
           MKNHYKR SP DL  D L  DF+SFDGNNIETWN DGCS+GQMMIIFQE++     +L  
Sbjct: 83  MKNHYKRASPPDLGRDGLRPDFRSFDGNNIETWNIDGCSEGQMMIIFQEIWWHN--HLTD 142

Query: 128 MNQREIVDA 137
            N+  I DA
Sbjct: 143 ANREVIKDA 149

[Close]
BLAST of MELO3C030509 vs. ExPASy TrEMBL
Match: A0A5D3CLG3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.8e-55
Identity = 111/130 (85.38%), Postives = 117/130 (90.00%), Query Frame = 0 

Query: 7   KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNT 66
           KGSSTDELL+ELTRKLSE  ISKEH  TSSKKEISNFGMGSLNTISY SPK  PIKVYNT
Sbjct: 142 KGSSTDELLKELTRKLSETPISKEHARTSSKKEISNFGMGSLNTISYDSPKNFPIKVYNT 201

Query: 67  DMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLK 126
           +MKNHYKRPSP DL WDDL LDF+SFDGNNIETWN DGCS+GQMMIIFQEMFVA T YL+
Sbjct: 202 NMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDGCSEGQMMIIFQEMFVAATSYLR 261

Query: 127 RMNQREIVDA 137
           RM+QREIVDA
Sbjct: 262 RMSQREIVDA 271

[Close]
BLAST of MELO3C030509 vs. ExPASy TrEMBL
Match: A0A5A7SXJ8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00890 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.8e-55
Identity = 111/129 (86.05%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 8   GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTD 67
           GSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNF MGSLNTISY SPKILPIK+YNTD
Sbjct: 38  GSSTDELLEELTRKLSETSISKENIGTSSKREVSNFEMGSLNTISYDSPKILPIKIYNTD 97

Query: 68  MKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLKR 127
           MKNHYKRPSP DL  DDL LDF+SFDGNNIETWN DGCS+GQMMIIFQEMFVA T YL+R
Sbjct: 98  MKNHYKRPSPPDLGCDDLRLDFRSFDGNNIETWNIDGCSEGQMMIIFQEMFVAATSYLRR 157

Query: 128 MNQREIVDA 137
           M+QREIVDA
Sbjct: 158 MSQREIVDA 166

[Close]
BLAST of MELO3C030509 vs. ExPASy TrEMBL
Match: A0A5D3DBQ3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00350 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.4e-53
Identity = 108/130 (83.08%), Postives = 118/130 (90.77%), Query Frame = 0 

Query: 7   KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNT 66
           KGSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNFGMG+LNTISY S KILPIKVYNT
Sbjct: 37  KGSSTDELLEELTRKLSETSISKENIGTSSKREVSNFGMGNLNTISYDSLKILPIKVYNT 96

Query: 67  DMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLK 126
           +MKNHYK+PSP DL WDDL  DF+SFD NNIETWN DGCS+GQM IIFQEMFVA T YL+
Sbjct: 97  NMKNHYKKPSPPDLGWDDLRPDFRSFDKNNIETWNIDGCSEGQMAIIFQEMFVAATSYLR 156

Query: 127 RMNQREIVDA 137
           RM+QREIVDA
Sbjct: 157 RMSQREIVDA 166

[Close]
BLAST of MELO3C030509 vs. ExPASy TrEMBL
Match: A0A5A7VII9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001190 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.4e-53
Identity = 108/130 (83.08%), Postives = 118/130 (90.77%), Query Frame = 0 

Query: 7   KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNT 66
           KGSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNFGMG+LNTISY S KILPIKVYNT
Sbjct: 37  KGSSTDELLEELTRKLSETSISKENIGTSSKREVSNFGMGNLNTISYDSLKILPIKVYNT 96

Query: 67  DMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLK 126
           +MKNHYK+PSP DL WDDL  DF+SFD NNIETWN DGCS+GQM IIFQEMFVA T YL+
Sbjct: 97  NMKNHYKKPSPPDLGWDDLRPDFRSFDKNNIETWNIDGCSEGQMAIIFQEMFVAATSYLR 156

Query: 127 RMNQREIVDA 137
           RM+QREIVDA
Sbjct: 157 RMSQREIVDA 166

[Close]
BLAST of MELO3C030509 vs. ExPASy TrEMBL
Match: A0A5D3DIF5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001850 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.8e-41
Identity = 94/129 (72.87%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 8   GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTD 67
           GSST ELLEELTRKLSE SIS+EHIGTSSK+E+ NFG+ SLNTISY SPKILPIKVYN D
Sbjct: 23  GSSTVELLEELTRKLSETSISEEHIGTSSKREVGNFGIRSLNTISYDSPKILPIKVYNND 82

Query: 68  MKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQMMIIFQEMFVATTIYLKR 127
           MKNHYKR SP DL  D L  DF+SFDGNNIETWN DGCS+GQMMIIFQE++     +L  
Sbjct: 83  MKNHYKRASPPDLGRDGLRPDFRSFDGNNIETWNIDGCSEGQMMIIFQEIWWHN--HLTD 142

Query: 128 MNQREIVDA 137
            N+  I DA
Sbjct: 143 ANREVIKDA 149

The following BLAST results are available for this feature:
BLAST of MELO3C030509 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0049723.12.0e-5485.38polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var... [more]
KAA0033915.12.0e-5486.05polyprotein [Cucumis melo var. makuwa] >TYK01297.1 polyprotein [Cucumis melo var... [more]
KAA0068152.11.1e-5283.08hypothetical protein E6C27_scaffold238G001190 [Cucumis melo var. makuwa][more]
TYK21071.11.1e-5283.08polyprotein [Cucumis melo var. makuwa][more]
TYK23160.15.7e-4172.87hypothetical protein E5676_scaffold142G001850 [Cucumis melo var. makuwa][more]
BLAST of MELO3C030509 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030509 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CLG39.8e-5585.38Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE... [more]
A0A5A7SXJ89.8e-5586.05Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00890 PE=... [more]
A0A5D3DBQ35.4e-5383.08Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00350 PE... [more]
A0A5A7VII95.4e-5383.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DIF52.8e-4172.87Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C030509 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030509.1MELO3C030509.1mRNA