MELO3C030388 (gene) Melon (DHL92) v4

Overview
NameMELO3C030388
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDUF4218 domain-containing protein
Locationchr06: 30056243 .. 30056501 (+)
RNA-Seq ExpressionMELO3C030388
SyntenyMELO3C030388
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACGAAATCATCAGAAGATGGATCTGAACCAACACCAGAGGCAATTATTTGTGAATGGGTTTTAGGAAACCGTTTAGGCCATACTAAAGGTCTTGGGTGAAAGGTAACCCCCCATGTAGCAATATGCACATCGACCCGTGTGTTTGAGAAAGATATTGGGGACAAGTATGAAAAGCTTCAGATGAAGGTGATCAACTTAAAAGAGGAAAATGTTATGTTGATGTCAACAATTTTGGACATCCAAGATCAATTGACTAA

mRNA sequence

TAACGAAATCATCAGAAGATGGATCTGAACCAACACCAGAGGCAACCCCCCATGTAGCAATATGCACATCGACCCGTGTGTTTGAGAAAGATATTGGGGACAAGTATGAAAAGCTTCAGATGAAGGTGATCAACTTAAAAGAGGAAAATGTTATGTTGATGTCAACAATTTTGGACATCCAAGATCAATTGACTAA

Coding sequence (CDS)

ACGAAATCATCAGAAGATGGATCTGAACCAACACCAGAGGCAACCCCCCATGTAGCAATATGCACATCGACCCGTGTGTTTGAGAAAGATATTGGGGACAAGTATGAAAAGCTTCAGATGAAGGTGATCAACTTAAAAGAGGAAAATGTTATGTTGATGTCAACAATTTTGGACATCCAAGATCAATTGACT

Protein sequence

TKSSEDGSEPTPEATPHVAICTSTRVFEKDIGDKYEKLQMKVINLKEENVMLMSTILDIQDQLT
Homology
[Close]
BLAST of MELO3C030388 vs. NCBI nr
Match: KAA0055007.1 (uncharacterized protein E6C27_scaffold43052G001590 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 9.3e-10
Identity = 41/69 (59.42%), Postives = 45/69 (65.22%), Query Frame = 0 

Query: 2   KSSEDGSEPTP---------------------EATPHVAICTSTRVFEKDIGDKYEKLQM 50
           KSSEDG++PTP                     +ATP+VA CTST VFEKDIGDKYEKLQ 
Sbjct: 248 KSSEDGAQPTPKKIIYEQVLEKRSGHTKGLGWKATPNVATCTSTHVFEKDIGDKYEKLQT 307

[Close]
BLAST of MELO3C030388 vs. ExPASy TrEMBL
Match: A0A5A7UKB8 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001590 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-10
Identity = 41/69 (59.42%), Postives = 45/69 (65.22%), Query Frame = 0 

Query: 2   KSSEDGSEPTP---------------------EATPHVAICTSTRVFEKDIGDKYEKLQM 50
           KSSEDG++PTP                     +ATP+VA CTST VFEKDIGDKYEKLQ 
Sbjct: 248 KSSEDGAQPTPKKIIYEQVLEKRSGHTKGLGWKATPNVATCTSTHVFEKDIGDKYEKLQT 307

The following BLAST results are available for this feature:
BLAST of MELO3C030388 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0055007.19.3e-1059.42uncharacterized protein E6C27_scaffold43052G001590 [Cucumis melo var. makuwa][more]
BLAST of MELO3C030388 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030388 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UKB84.5e-1059.42DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of MELO3C030388 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030388.1MELO3C030388.1mRNA