MELO3C030384 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030384
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Girdin-like
Location	chr06: 18850185 .. 18850869 (+)
RNA-Seq Expression	MELO3C030384
Synteny	MELO3C030384

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACATACGTTGATGAAGACAAAGGTCTTACACTCTTGGCATTGTGTATTTACGGAGCGGTGATTTTTCCTAAAGCAGAGGGTTATGTTGATGGGAAAGTGATCAAATTGTTTTTTGAAATGGAACGAGGAGTCAATCCTATTATACCTATATTGGCTGAAACTTTTCGATCTCTTAACTATTGTAGAAATAAAGGGGAAGGAAAACTGAATTGTTGTCTTCCTTTATTATATATTTGGATACATAGTCATATCAAATTTCCCGCAGAGTTTAGGTGTCCAAGGTTAGATTTCAGTAGCCCAAGGAAGGAGGCTTGGTTGTCTTTCTTTGCAAAACTGACTTCTAAAAATGTCGTATGGAAGGCTCAATGGATGCCTTTAAAGGCGGTGATATATAGATGCAGAGATTTTCACAGTATGCCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAAGTGTGGCTCAAACAGTTTATACCACCAACTCATAATTTGCAAGAGTCTGATTTTTCATACGATCCTGAAGATTGTCAAGGAAAAAAACGTCAAGCAGTATGCACTTGGAAATCTATAAGAAAGATAAAAGACAAAGGACATTACGAAGGAGTCATTAGTGGGTACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGATATCTC

mRNA sequence

AAACATACGTTGATGAAGACAAAGGTCTTACACTCAATGGATGCCTTTAAAGGCGGTGATATATAGATGCAGAGATTTTCACAGTATGCCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAAGTGTGGCTCAAACAGTTTATACCACCAACTCATAATTTGCAAGAGTCTGATTTTTCATACGATCCTGAAGATTGTCAAGGAAAAAAACGTCAAGCAGTATGCACTTGGAAATCTATAAGAAAGATAAAAGACAAAGGACATTACGAAGGAGTCATTAGTGGGTACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGATATCTC

Coding sequence (CDS)

ATGCCTTTAAAGGCGGTGATATATAGATGCAGAGATTTTCACAGTATGCCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAAGTGTGGCTCAAACAGTTTATACCACCAACTCATAATTTGCAAGAGTCTGATTTTTCATACGATCCTGAAGATTGTCAAGGAAAAAAACGTCAAGCAGTATGCACTTGGAAATCTATAAGAAAGATAAAAGACAAAGGACATTACGAAGGAGTCATTAGTGGGTACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGATATC

Protein sequence

MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI

Homology

[Close]

BLAST of MELO3C030384 vs. NCBI nr
Match: TYK07606.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 224.6 bits (571), Expect = 4.1e-55
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRCRDFHSMPLLGP GGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 33  MPLKAVIYRCRDFHSMPLLGPRGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI
Sbjct: 93  QGKKRQAVCAWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 136

[Close]

BLAST of MELO3C030384 vs. NCBI nr
Match: KAA0060423.1 (uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa])

HSP 1 Score: 224.6 bits (571), Expect = 4.1e-55
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRCRDFHSMPLLGP GGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 329 MPLKAVIYRCRDFHSMPLLGPRGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 388

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI
Sbjct: 389 QGKKRQAVCAWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 432

[Close]

BLAST of MELO3C030384 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 7.0e-55
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 298 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 357

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDI
Sbjct: 358 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDI 401

[Close]

BLAST of MELO3C030384 vs. NCBI nr
Match: TYK16558.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 7.0e-55
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 33  MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDI
Sbjct: 93  QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDI 136

[Close]

BLAST of MELO3C030384 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 7.0e-55
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 142 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 201

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDI
Sbjct: 202 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDI 245

[Close]

BLAST of MELO3C030384 vs. ExPASy TrEMBL
Match: A0A5D3CB80 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9127G00010 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.0e-55
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRCRDFHSMPLLGP GGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 33  MPLKAVIYRCRDFHSMPLLGPRGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI
Sbjct: 93  QGKKRQAVCAWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 136

[Close]

BLAST of MELO3C030384 vs. ExPASy TrEMBL
Match: A0A5A7UWQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002420 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.0e-55
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRCRDFHSMPLLGP GGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 329 MPLKAVIYRCRDFHSMPLLGPRGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 388

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI
Sbjct: 389 QGKKRQAVCAWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 432

[Close]

BLAST of MELO3C030384 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.4e-55
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 298 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 357

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDI
Sbjct: 358 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDI 401

[Close]

BLAST of MELO3C030384 vs. ExPASy TrEMBL
Match: A0A5D3CZ50 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.4e-55
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 33  MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDI
Sbjct: 93  QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDI 136

[Close]

BLAST of MELO3C030384 vs. ExPASy TrEMBL
Match: A0A5A7TNJ1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.4e-55
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 142 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 201

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDI 105
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDI
Sbjct: 202 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDI 245

The following BLAST results are available for this feature:

BLAST of MELO3C030384 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07606.1	4.1e-55	98.08	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0060423.1	4.1e-55	98.08	uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]	[more]
KAA0036941.1	7.0e-55	96.15	girdin-like [Cucumis melo var. makuwa]	[more]
TYK16558.1	7.0e-55	96.15	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0044912.1	7.0e-55	96.15	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C030384 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C030384 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CB80	2.0e-55	98.08	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9127G00010 P...	[more]
A0A5A7UWQ6	2.0e-55	98.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T5S7	3.4e-55	96.15	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]
A0A5D3CZ50	3.4e-55	96.15	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE...	[more]
A0A5A7TNJ1	3.4e-55	96.15	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE...	[more]

BLAST of MELO3C030384 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 2..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030384.1	MELO3C030384.1	mRNA