MELO3C030345 (gene) Melon (DHL92) v4

Overview
NameMELO3C030345
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon gag protein
Locationchr08: 33418037 .. 33423378 (-)
RNA-Seq ExpressionMELO3C030345
SyntenyMELO3C030345
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGAAATTCCTAGAGAAATGTTTTGCCTTAACCAAGGCGATCTCAATCATGGTAGAAATCTATGGAATTAAACAAGCTAATGGGGAAACTTTGCATGAATATTGGGAATGGTTTAAGGAGCTTTGTTCTAGTTACCCATGCTGCCAAACTAATGACCAAGCTTTAGTACGATGCTTCTATAGTGGCCTAACGCTTTTAGAGAGATTATTTTCATGTAGCGGCGGGAGGTGCACTTAGTTATAAAACCCCAACTGAGGCTAGGGCATTTATGGCTAGAATGGGGGAAAATACTCAAACCTTTGGGAGTAGGATCGAGAGCTGTAATTCTTCCTCTAGTGAGATAAGTGGGCTTAAAAATCAAATGAGCTACCTTATAAGCATGGTTAGAGATGTCAACCGGACACTTTAATGATCAATGCCCACAAGTAAAAGATGTTAACCTAGCTAATGGGTTTATGCTGGTTTGACACTACACACACGGTTGCTATTTTGGGTCCTAAAGTGCTTTTTTCACACTTTTTGAACTTTCTGTTAGGTCGTGAGTTATGAACTTACACTTAAGATGTCTTAGGTCATTTATTAAGGTCCAAGTGATACGTAGACACGTTTCTAACACTTTTTAGGTTTGTTTTAAACTTAATTTGTTGAAGTTACACACTTTGTTGCCATTTTGGGTCTTGAAATGCTCTTTTCTCACCTTTGTTATTTTTTGCTAGGTCACGAGTAACGAATTTACACTTAAGCTTCGTTAGATTGTCTTTTAAATTCAAGTGATACTTAGGCACATTTTGAACACTTTTAAGGTTGGTTGGAGGATAAGTTTGTTGTACTTATACATTTGGTTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTGAAGTGTTTTTTTCACAGTTTTTAACTTTTTGGTATGTTAGGAGTTATGAACTTACACTTAAGTTTTGTGAGGTTGTTTTCAAAGTTCAAGTGATAAGTAGACACGGTTGGAACACTTTTTAAATTTGTTTGAAACTAAGTTTGTTGCACTTACATACCTGGTTGCCATTTGGGGTCCTCAAAGCTTTTTTCACCTTTTTTTGAACATTTTAGCCAGTTATGAGTTACAAACTTACACTTATGCATTGTTAAGAGGTTTTAAACTCTTTTTATTTGTTTGGAACTAAGTTTGTTGCATTTTCACCCTTGGTTGAGATGTTAGGTCTTAGAGTGCTTTCTCGCACTTTTTGACATTTTGGTTGGTTGTGATTTATGAACCTATACTTAAGCATTGTTTAGTCGTTTTGAAAGCTTACGCACGTTTTGAACTCTTTTTACATTGGTTTGAAACAAAGTTTGTTGCACTTACACACTTGGTTGCCATTTTCGGTCTTGAAGTGATTTTTTCACGCTTTTTGAACTTTTTGGTAGGTTATGATTGACGAAATTACACGTAAGTTTTGTTAGGTCGTTTTGATAGTTCAAGTGATACTTAGACACGTTTTGAACACCTTTTAGGTTGGTTTGAGACTCAGTTTTTTGCACTTCTGCAGTTGATTACCATTTTGGGTATTAAAGTGCATTTTCTACACTTTTTGAAGTCTTTGGTAGGTTATGAGTTATGAAATTACACATGAGCATTGTTACGTCATTTTTTAAGTTCGAGTGGTACTTAGACATGTTTTGAACACCTTTAGGTTTGTTACAACTAAGTTTGTTGTACATATAGACATGGTCGCAATTGAAAGGCTTTTTTCACACTTTTTCAAATTTTTGGTAGGTTATAAGTTACAAACTTATACTTAAGCGTTATTTGGTCGTTTGGAAGTTAAGATGTGTTTTGAATACCTTTTAGGTTTGTTTAAAATTTAAGTTTGTTGCACTTACACAGTTGGCATTCTGGATCTTGAAGTGCTTTTTTCAACCTTTTCTGAACTTTTTGGTACGTTATGAGTTACGAACTTATAGTTAAGATTTGTTAGGTCATTTTGAAAGTTCAAGTGCTACTTAGACACATTTTGAAAATATTTTAGGTTGGTTTGACACTAAGTTTGTTGCACTTACACACACGGTTGCCATTTTGGGTCTTGAAGTGATTTTTTCATAGTTTTTAAACTTTCTGCCGGGTTATGAGTTATGACCTCACCTTTAAGATGTTTTAGGTCGTTTTTTAAGGTCCAAGTGATACATAGACATGTTTTCAACACTTTTTAGGTTTGTTTTACACTTAGTTTGTCGAACTTATACACTTTGTTGCCATTTTGGGTCTTGAAATGCTCTTTTCTCCCTTTCTTTTTTACTTTTTGTTAGGTTATGAGTAACGAACTTACACTTAAGCTTTGTTAGATTGTCTTTAGAATTCAAGTGACACTTAGACACATTTTGAACACTCTTAAGGTTGGTTTGAGGCTAAGTTTTTTTGTACTTATACATTTGGTTGACATTTTTTTTTGGTCTTGAAGTGCTTTTTCACAATTTTTAACTTTTTAGTATGTTAGGAGTTATGAACTTACACTTAAGCTTTGTGAGGTTGTTTTCAAAGATCAAGTGATAAGTAGACACGGTTGGAACACTTTTTAAGTTTGTTTGAGACTAAGTCTGTTGCACTTATACACTTTGTTGCCATTATAGGTCTTCAAGTGTTTTGTTCACACTTCTTAAACTTTTTGGATTGTTATGAGTTACAAACATATACTGAAGCATTGTTTGTCGTTTTGAAATGTTAGACACATTTTAAACACTTTTTTGTTTGGTTTGAAACTATGTTTGTTGGACTTACACATTTGGTTGCCATTTTGGGTTTTGAAGTGTTTTTTTTTCACACTTTTTGAACTTTTTGGTAGGTTACGAGTTATGAACTTACACTTACGCATTGTCATAATTCATTTAACAATAAAAGTGAAATTTCCTTTCAATTCGTTTTCAAATTTTTTACATTACTTTTTAGGTTGGTTTGAAACTATGTTTGTTGTGCTAACACACTTGGTTGACATGTTGCGTCTTGAAGTGTTTCTCACACTTTTTGAAATTTGATAGTTTGTGAGTTACGAGCTTTCAATTATCATTTTTTGGTCGTTTTGAAAACTTTTTTGGTCGTTTTGAACTGAGTTTGTTGCACTTTTACTGTTGATTGCCATCATAGGTATTGAAGTGCTTCTTTCACACTTTTTAAACTCCTTAGTAAGTTATGAGTTACAAACTTGATTGTCATTTTTGGTCTTGAAGTGCTTTATTCACATTTTTGAACTTTTTGGTAGGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTATTATTATTATTGTTTACTTAAGGAAAGTAAAGCTAAGGAGTATTTTGTTGAACAATCGTGTAGGAAATTAAATGATTGTTTGGAAAGATAGATGATCGCGTAAGAAGTAAACAATTGTTTGAAGGTAGAAAGCTAAACTATCGGGTAAGAGGGTAAACAGTCGTTTAGAAAGTTAAATGATAGTGTAGGAGGTTGTAGGGTAAACGATCCTGATAATACAATCCGACAACCCAAATCTACACATATTTTACGGGTTGGGTTGGAAAATGAATTCAGGTTATTCGAATTGTCAAACCAACCAACCCAAAAATATGAGATCGGTTGAGAATGTCTCCTAGCCCAACCTCACCCGTTTACATCTTTAATGTCATCCTCGCATGAGATTATACCATTATCCAGTGAACTAAGGAATAGACCTCGAGTTTGATGGATGTTGGAGGTTGGAGAATCTATGAAAGGACATCTAAGGCTAAGTAAGGAAGAATAAAAGGAAGTTCATTTCTAAAAAAAGTGGTGATCTCGTTTTGCTTGCTGGAAGAGAGGAAACTTTTGGATCACCTTTTCCAACCAGATAGCGAGTGATCACTCAATAATGGACACTAAGAGAAAACGGCTGGAAATGAATACCTATCCATTATTGGAATCAAACCTGTGTCTTCAAAAGACAATGTCCTAACCACCGGACGAAAGTAACTAAAAAGCCACTCTTGTTTTTATATGCAATTTGACATTATATTTGTTTTTATGTTAGCGATTTCTTATGTGAATTCGACAGGTCTCTCCCTTTCCTTCAAGTTCCCCTACTGACCCAGTGACACACCAATCATGCCCCTTCCCTTTCTTTAATCATAAAGCCCTCTTTCTTTGTCTTTCGTCCTCCATGATATTCATCCTATACAAATAATTAAGTGAGGCCTCATTTTTTCTAATTCAAAAAAGAAAATTGGGGTTTCCTATCCCCGACTATAATGAAATACAAAACAGTGTTCTTACAGGAATACAAATTATAAGATTACTAGAGTTTATTTATGATCCCGAGTTTTCAGACACGTCGCACTTCCACTTGGGTCAAGGTCGCCACTTGAACCTAAGACGAATCAAAGAAGAGTGGGAAACCTCTCGGTGATTTTGGAATTCAACATCTTAGAAGGGATGTATAAGTTATTTTTCCTTCGGCCCACCAAAGAAATCCTTAAGCTACCCTTTTTTAACATACTTATCAGAAGTCTTTTCTGTGTACTTGGTGGAGAAATTCCTATTTTTCAGCCGTGGAGAAGCTCGATCGGGAAGAGGGGAAAGGCTTGGGCTTACCTATCCCTATAGAACCTCATAAAGGAAAGGGAGCTGTTGAGAGGTTCCATATTGCCGAGCTGAAAAGCAGCACTTCTCTACGTGATCGTAGTATCTCACCTCCTCTCATCCCTGCAGCATTTCATAGTATCTATACTCTATTTTTGGTTCACTGATAAGGAAGATAGAGTTGGGGTGACATATGTGATACGTCAAGTATGACCTTGAGAGATACATGCTAACTATGGGTAGAAATCAGGAACCATTATGTAAATAATTGCGAGGGTTTACAGATCTCTTATACTACCATCAATCGCCAGAGTGGAACAACCAGAAAAATCAGTGCCGTTAGAAAGCTGTATGATAGGTGGTAACTATCTTGTACGGTTCGAGGGGTAATTGGCGTACTCGTATCAATGGGGGGAATCTTTGGCTCTATCGAACATACAGGGAATTGAAGGTAGCATTCTACTGATGTTAAGTCATGGACTGGTTCCTTCAGCCCTTTTTTTATGTGTTGGTGTTCTATATAACCGGCATTAGACTCGACTTGTTAGATATTACGGAGGTTTAATGAGCACCATGCCGAATCTCTCTACCATTTCCTTCTCTTTCACTTTAGCCAATATGAGTTTACATGTTACTAGCAGCTTTATCGGGGAATTTCCCATCTTAGTAGGAGCTTTCCAAAGAAATAGCTTAGTAGCCGCATTAGCCGCGTCTCGACCCTGA

mRNA sequence

ATGGAAAAGAAATTCCTAGAGAAATGTTTTGCCTTAACCAAGGCGATCTCAATCATGGTAGAAATCTATGGAATTAAACAAGCTAATGGGGAAACTTTGCATGAATATTGGGAATGGTTTAAGGAGCTTTGTTCTACGGCGGGAGGTGCACTTAGTTATAAAACCCCAACTGAGGCTAGGGCATTTATGGCTAGAATGGGGGAAAATACTCAAACCTTTGGGAGTAGGATCGAGAGCTGTAATTCTTCCTCTAGTGAGATAAGTGGGCTTAAAAATCAAATGAGCTACCTTATAAGCATGGTTATGATTGACGAAATTACACGTTGGTTTGACACTAAGTTTGTTGCACTTACACACACGGTTGCCATTTTGGGTCTTGAATATGTTAGGAGTTATGAACTTACACTTAAGCTTTGTGAGGTTGTTTTCAAAGATCAAGTGATAAGTAGACACGGTTGGTTTGAAACTATGTTTGTTGTGCTAACACACTTGGTTGACATGTTGCGTCTTGAAGTGTTTCTCACACTTTTTGAAATTTGATAGAAAGTAAAGCTAAGGAGGTAAACGATCCTGATAATACAATCCGACAACCCAAATCTACACATATTTTACGGGTTGGGTTGGAAAATGAATTCAGACACGTCGCACTTCCACTTGGGTCAAGGTCGCCACTTGAACCTAAGACGAATCAAAGAAGAGTGGGAAACCTCTCGAAGTCTTTTCTGTGTACTTGGTGGAGAAATTCCTATTTTTCAGCCGTGGAGAAGCTCGATCGGGAAGAGGGGAAAGGCTTGGGCTTACCTATCCCTATAGAACCTCATAAAGGAAAGGGAGCTGTTGAGAGGTTCCATATTGCCGAGCTGAAAAGCAGCACTTCTCTACGTGATCGTAGTATCTCACCTCCTCTCATCCCTGCAGCATTTCATAATAGAGTTGGGGTGACATATGTGATACGTCAAATCTCTTATACTACCATCAATCGCCAGAGTGGAACAACCAGAAAAATCAGTGCCGTTAGAAAGCTGTATGATAGATATTACGGAGGTTTAATGAGCACCATGCCGAATCTCTCTACCATTTCCTTCTCTTTCACTTTAGCCAATATGAGTTTACATGTTACTAGCAGCTTTATCGGGGAATTTCCCATCTTAGTAGGAGCTTTCCAAAGAAATAGCTTAGTAGCCGCATTAGCCGCGTCTCGACCCTGA

Coding sequence (CDS)

ATGGAAAAGAAATTCCTAGAGAAATGTTTTGCCTTAACCAAGGCGATCTCAATCATGGTAGAAATCTATGGAATTAAACAAGCTAATGGGGAAACTTTGCATGAATATTGGGAATGGTTTAAGGAGCTTTGTTCTACGGCGGGAGGTGCACTTAGTTATAAAACCCCAACTGAGGCTAGGGCATTTATGGCTAGAATGGGGGAAAATACTCAAACCTTTGGGAGTAGGATCGAGAGCTGTAATTCTTCCTCTAGTGAGATAAGTGGGCTTAAAAATCAAATGAGCTACCTTATAAGCATGGTTATGATTGACGAAATTACACGTTGGTTTGACACTAAGTTTGTTGCACTTACACACACGGTTGCCATTTTGGGTCTTGAATATGTTAGGAGTTATGAACTTACACTTAAGCTTTGTGAGGTTGTTTTCAAAGATCAAGTGATAAGTAGACACGGTTGGTTTGAAACTATGTTTGTTGTGCTAACACACTTGGTTGACATGTTGCGTCTTGAAGTGTTTCTCACACTTTTTGAAATTTGA

Protein sequence

MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCSTAGGALSYKTPTEARAFMARMGENTQTFGSRIESCNSSSSEISGLKNQMSYLISMVMIDEITRWFDTKFVALTHTVAILGLEYVRSYELTLKLCEVVFKDQVISRHGWFETMFVVLTHLVDMLRLEVFLTLFEI
Homology
[Close]
BLAST of MELO3C030345 vs. NCBI nr
Match: TYK09432.1 (Copia protein [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-14
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCSTAGGALSYKTPTEAR 60
           ++KKFLEK F  ++A +I  EIYGI+Q  G +L EYWE FKEL + AGGAL+ KTP EAR
Sbjct: 109 LKKKFLEKFFPASRANNIRKEIYGIRQVFGGSLSEYWERFKELYAAAGGALADKTPIEAR 168

Query: 61  AFMARMGENTQTFGSRI-ESCNSSSSEIS 89
             ++RM EN+Q+FG+R  E  NS + E+S
Sbjct: 169 ELISRMAENSQSFGNRASELDNSLTKEVS 197

[Close]
BLAST of MELO3C030345 vs. NCBI nr
Match: KAA0046065.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-14
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCSTAGGALSYKTPTEAR 60
           ++KKFLEK F  ++A +I  EIYGI+Q  G +L EYWE FKEL + AGGAL+ KTP EAR
Sbjct: 109 LKKKFLEKFFPASRANNIRKEIYGIRQVFGGSLSEYWERFKELYAAAGGALADKTPIEAR 168

Query: 61  AFMARMGENTQTFGSRI-ESCNSSSSEIS 89
             ++RM EN+Q+FG+R  E  NS + E+S
Sbjct: 169 ELISRMAENSQSFGNRASELDNSLTKEVS 197

[Close]
BLAST of MELO3C030345 vs. NCBI nr
Match: KAA0058150.1 (uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 4.6e-14
Identity = 55/132 (41.67%), Postives = 78/132 (59.09%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCST-------------- 60
           ++KKFLEK F  ++A +I  EIYGI+QA GE+L +YWE FKELC++              
Sbjct: 109 LKKKFLEKFFPASRANNIRKEIYGIRQAFGESLSKYWERFKELCASLPHYHIFDPSLIQY 168

Query: 61  ----------------AGGALSYKTPTEARAFMARMGENTQTFGSRI-ESCNSSSSEISG 102
                            GGAL+ KTPTEAR  ++RM EN+Q+FG+R  E  NS + E+S 
Sbjct: 169 FYSGLLSFDRNTVDAATGGALADKTPTEARKLISRMMENSQSFGNRASELDNSLTKEVSE 228

[Close]
BLAST of MELO3C030345 vs. NCBI nr
Match: KAA0056713.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 6.0e-14
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCST-------------- 60
           ++KKFLEK F  +KA +I  EIYGI+QA GE+L  YWE FKELC++              
Sbjct: 67  LKKKFLEKFFPASKANNIRKEIYGIRQAFGESLSRYWERFKELCASFPFLHISNPSLIQY 126

Query: 61  ----------------AGGALSYKTPTEARAFMARMGENTQTFGSRI-ESCNSSSSEISG 102
                           AGGAL+ KTP EA+  ++RM EN+Q+FG+R  E  NS + E+S 
Sbjct: 127 FYSGLLSSDKNTVDAAAGGALADKTPIEAQELISRMAENSQSFGNRASELVNSLTKEVSE 186

[Close]
BLAST of MELO3C030345 vs. NCBI nr
Match: KAA0061138.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 3.9e-13
Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCST-------------- 60
           ++KKFLEK F  ++A +I  EIYGI+QA GE+L +YW+  KELC++              
Sbjct: 42  LKKKFLEKFFPASRANNIRKEIYGIRQAFGESLSKYWKRSKELCASFPHHHISDPSLIQY 101

Query: 61  ----------------AGGALSYKTPTEARAFMARMGENTQTFGSRI-ESCNSSSSEISG 102
                           AGGAL+ KTPTEAR  ++RM EN+Q+FG+R  E  NS + E+S 
Sbjct: 102 FHSGLLSFDRNTIDVVAGGALADKTPTEARELISRMVENSQSFGNRASELDNSLTKEVSE 161

[Close]
BLAST of MELO3C030345 vs. ExPASy TrEMBL
Match: A0A5A7TXC8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1096G00170 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-15
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCSTAGGALSYKTPTEAR 60
           ++KKFLEK F  ++A +I  EIYGI+Q  G +L EYWE FKEL + AGGAL+ KTP EAR
Sbjct: 109 LKKKFLEKFFPASRANNIRKEIYGIRQVFGGSLSEYWERFKELYAAAGGALADKTPIEAR 168

Query: 61  AFMARMGENTQTFGSRI-ESCNSSSSEIS 89
             ++RM EN+Q+FG+R  E  NS + E+S
Sbjct: 169 ELISRMAENSQSFGNRASELDNSLTKEVS 197

[Close]
BLAST of MELO3C030345 vs. ExPASy TrEMBL
Match: A0A5D3CDT7 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00160 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-15
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCSTAGGALSYKTPTEAR 60
           ++KKFLEK F  ++A +I  EIYGI+Q  G +L EYWE FKEL + AGGAL+ KTP EAR
Sbjct: 109 LKKKFLEKFFPASRANNIRKEIYGIRQVFGGSLSEYWERFKELYAAAGGALADKTPIEAR 168

Query: 61  AFMARMGENTQTFGSRI-ESCNSSSSEIS 89
             ++RM EN+Q+FG+R  E  NS + E+S
Sbjct: 169 ELISRMAENSQSFGNRASELDNSLTKEVS 197

[Close]
BLAST of MELO3C030345 vs. ExPASy TrEMBL
Match: A0A5A7USL5 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004630 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.2e-14
Identity = 55/132 (41.67%), Postives = 78/132 (59.09%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCST-------------- 60
           ++KKFLEK F  ++A +I  EIYGI+QA GE+L +YWE FKELC++              
Sbjct: 109 LKKKFLEKFFPASRANNIRKEIYGIRQAFGESLSKYWERFKELCASLPHYHIFDPSLIQY 168

Query: 61  ----------------AGGALSYKTPTEARAFMARMGENTQTFGSRI-ESCNSSSSEISG 102
                            GGAL+ KTPTEAR  ++RM EN+Q+FG+R  E  NS + E+S 
Sbjct: 169 FYSGLLSFDRNTVDAATGGALADKTPTEARKLISRMMENSQSFGNRASELDNSLTKEVSE 228

[Close]
BLAST of MELO3C030345 vs. ExPASy TrEMBL
Match: A0A5A7ULC7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29G00020 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.9e-14
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCST-------------- 60
           ++KKFLEK F  +KA +I  EIYGI+QA GE+L  YWE FKELC++              
Sbjct: 67  LKKKFLEKFFPASKANNIRKEIYGIRQAFGESLSRYWERFKELCASFPFLHISNPSLIQY 126

Query: 61  ----------------AGGALSYKTPTEARAFMARMGENTQTFGSRI-ESCNSSSSEISG 102
                           AGGAL+ KTP EA+  ++RM EN+Q+FG+R  E  NS + E+S 
Sbjct: 127 FYSGLLSSDKNTVDAAAGGALADKTPIEAQELISRMAENSQSFGNRASELVNSLTKEVSE 186

[Close]
BLAST of MELO3C030345 vs. ExPASy TrEMBL
Match: A0A5A7V0Q7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00020 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-13
Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 0 

Query: 1   MEKKFLEKCFALTKAISIMVEIYGIKQANGETLHEYWEWFKELCST-------------- 60
           ++KKFLEK F  ++A +I  EIYGI+QA GE+L +YW+  KELC++              
Sbjct: 42  LKKKFLEKFFPASRANNIRKEIYGIRQAFGESLSKYWKRSKELCASFPHHHISDPSLIQY 101

Query: 61  ----------------AGGALSYKTPTEARAFMARMGENTQTFGSRI-ESCNSSSSEISG 102
                           AGGAL+ KTPTEAR  ++RM EN+Q+FG+R  E  NS + E+S 
Sbjct: 102 FHSGLLSFDRNTIDVVAGGALADKTPTEARELISRMVENSQSFGNRASELDNSLTKEVSE 161

The following BLAST results are available for this feature:
BLAST of MELO3C030345 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK09432.11.2e-1455.06Copia protein [Cucumis melo var. makuwa][more]
KAA0046065.11.2e-1455.06retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0058150.14.6e-1441.67uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa][more]
KAA0056713.16.0e-1440.91retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0061138.13.9e-1340.91retrotransposon gag protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C030345 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030345 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TXC85.9e-1555.06Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3CDT75.9e-1555.06Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00160 ... [more]
A0A5A7USL52.2e-1441.67Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7ULC72.9e-1440.91Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7V0Q71.9e-1340.91Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
BLAST of MELO3C030345 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030345.1MELO3C030345.1mRNA