MELO3C030315 (gene) Melon (DHL92) v4

Overview
NameMELO3C030315
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr03: 25857379 .. 25862634 (+)
RNA-Seq ExpressionMELO3C030315
SyntenyMELO3C030315
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCACCATTATTCTTCCCTTTTATTTCCTTAATTTTGTGTATAAGTATACATGTATGCTGTAATATTTGTAACAAGGAATACAGAAAAATCAATAAACTTACATGGTATCAGAGCCCTAATCTGTTGTCGCCGCCGCTGCACATCCGCCAACCAGCCGACAACCATCCGCCGGAAAACTCTGTTTTGTCCTCCATTCAGCCGTCGACCCTTGCTCACCCACCTGCTTAGATCAGTTCTCAGCCTCAGCCTCTGTTCCAGATCTTAGATCTCTGCCTCAGCCTCTGATTCGTTCGCCACAATCTGCTCTGATTTCCGTCTGCCGCTCGATTTCTGTCCACAGATCGAGTTCCGTCACAACCGATTTTCGCTTCCGCATCCGCCCATCCCCTCTGTCCAACGCCACCCCCTCTGTCCGACGCTAAGTCCGCAGCTCTCTGTCCGTACCGTGAGATTAAGCCGACAGTTCATTCCACCGCACGTTCCTCTCGCCAGAAACGCTGAACGCCGTCGAAACCGAAGCCTAACCACAGCCGCGCTACTCAACTCGTCGTCCAGTTCACGCGCACTCCAGATCTGAAGTTGCGGGCTTCGCACTTTGTTGTTCTTCGTCCCTCTTTCGACGACCAAACGGAAAGCGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACGCCCGATTAACACTCACGCTATCTCGTGAAAATCATTCACCACGTACAAATAGTGAAACTACCGAGTCTCTCGTACTTCAGATACTTCAAATCATTTCTGTGATCTGTGCTAACTAATCCGTGAAATTAAGTTCAGGGATTGAATTTTGCCACTTTAATCCTTAGAGATGGAGAAAAATGACGTAGCTCGCCCCATTAGCACCATCCTTGATGGCACCAACTATATTACCTGGGCCCACCAAATGAGGAGTTTTCTAATAGGTCGAAAATTATGGCGTATCGTCACGGGAGATATTACCAAACCTGTCAAACCTATTGTCCATGAAACCAGTGCAGAGGATATTCAGTACATTGAAAGACTTGAGGATTGGGACAGCAAAAATCACCAAATTATCACTTGGTTGGGTAATACTTCTATTCCAGCCATCCACACTCAGTTTGATGCTTTTGATAGTGCAAAAGAACTCTGGGATTTTCTATACACACGTTTTCAGTCTATAGGACTGGCTCATTATTATCAGCTGCATTCTACACTTGTTAGTCTCAATCAGGAGGTAGGACAATCTGTGAATGAATATCTCGCCACTCTTCAGCCTATCTGGACTCAGTTGGAGCAGGCAAAAATTAGCCCTGACCATATTCGTCTCATCAAAGTATTAATGGGTCTTCGACCAGAATATGAATCCGTTCGTGCTGCTCTGTTACATCGTAATCCTCTGCCATCTCTTGATGCTGCTGTTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCTCTGCACTCTGATGTCGCCCTTGCAACTACTCATCTCCGACAAGCTAATGAGACCATCTTTTGTAAGAATTGCAAACTTCATGGTCATAAGTTTGCTAACTGTCCTACCATTGAGTGCAGGTATTGTCACAAACGAGGTCATATTTTGGATAATTGTCCAACACGCCCACCCCGCCCTCCTGGTCATTCACACAAACCCAAGTTTTCCCATAAAGCGGGTTCTTCATCTGTTGTTGCTGCCGCTACATCATCTGACATCACTGAACCTTCGAGTCTTCAGTTGACTGATCTTCATGATTTACTGAAACAGGTGATCTCTTCCCAATCCACTGCTCTTGCTGTCACCCCAGGTACCTCTTGGCTCCTTGACTCTGCCTGTTGTAATCACATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCCGCTGATGGTAATTCCATGTCTATCTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCTTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGCACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTCCAACATTCTCCTGTGTTTCCAGCCATTTCTGCTCCTGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAACGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCAAAACAACCTGCTTTGTCCTTCCCTAAATCTACTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGTTTTACTTGGATTTACTTTCTCAGAAATCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCATACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGCCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCTACTTACTCTCATCTCAAAGTCTTTGGATGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTTGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCTCTGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTCTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCTTCTACCCCTCTATTTCCCACTCCTAATTCACCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGACCTCCCATCTGTTCCTTGTGAGGAACCTGAACATGCACCTGTCCGACGGTCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCTTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATAGATAACGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTCAAAATAAAAACACATTCTGATGGCTCTATTGAGCGATACAAAGCACGTCTTGTTGCTAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACATTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTGAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGTCGTGCTCTCTATGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACATTTAGTTCCACCATTACCCAACTCGGGTTCACCTCCAGTTCTCATGATTCTGCCTTATTTACTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAAATGAAGGACTTAGGCAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCGGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGTCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCAGGTGATCCTACTGATAGACGGTCTACTACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGTAACACACTTCATCTCCAACCCATCTCTACCACTGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGAGTTTGAGGGAGGGTATTAATGAAATTAGAGCAAATATCATGGAGTAGATTATGCTCAAATTTCATGGAGAAGATTATGCTCAAATATCAAGGAGGAGATTATGTTGTATTTATCACCATTATTCTTCCCTTTTATTTCCTTAATTTTGTGTATAAGTATACATGTATGCTGTAATATTTGTAACAAGGAATACAGAAAAATCAATAAACTTACAAACGGAATATATCTTCTCTTCTTACTTTGCTCTTCTGAGCTTTCTCAGCAAAGACCTCTTTATAGCCTCCTTTTTACTCTTTTTTCTTTTAGTTTTTATCAGAACCAATTTCATATCCTTCTTCCCCATGTGCCAAGATTCCAATATCAATGTCATAA

mRNA sequence

ATCACCATTATTCTTCCCTTTTATTTCCTTAATTTTGTGTATAAGTATACATGTATGCTGTAATATTTGTAACAAGGAATACAGAAAAATCAATAAACTTACATGGTATCAGAGCCCTAATCTGTTGTCGCCGCCGCTGCACATCCGCCAACCAGCCGACAACCATCCGCCGGAAAACTCTGTTTTGTCCTCCATTCAGCCGTCGACCCTTGCTCACCCACCTGCTTAGATCAGTTCTCAGCCTCAGCCTCTGTTCCAGATCTTAGATCTCTGCCTCAGCCTCTGATTCGTTCGCCACAATCTGCTCTGATTTCCGTCTGCCGCTCGATTTCTGTCCACAGATCGAGTTCCGTCACAACCGATTTTCGCTTCCGCATCCGCCCATCCCCTCTGTCCAACGCCACCCCCTCTGTCCGACGCTAAGTCCGCAGCTCTCTGTCCGTACCGTGAGATTAAGCCGACAGTTCATTCCACCGCACGTTCCTCTCGCCAGAAACGCTGAACGCCGTCGAAACCGAAGCCTAACCACAGCCGCGCTACTCAACTCGTCGTCCAGTTCACGCGCACTCCAGATCTGAAGTTGCGGGCTTCGCACTTTGTTGTTCTTCGTCCCTCTTTCGACGACCAAACGGAAAGCGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACGCCCGATTAACACTCACGCTATCTCGTGAAAATCATTCACCACGTACAAATAGTGAAACTACCGAGTCTCTCGTACTTCAGATACTTCAAATCATTTCTGTGATCTGTGCTAACTAATCCGTGAAATTAAGTTCAGGGATTGAATTTTGCCACTTTAATCCTTAGAGATGGAGAAAAATGACGTAGCTCGCCCCATTAGCACCATCCTTGATGGCACCAACTATATTACCTGGGCCCACCAAATGAGGAGTTTTCTAATAGGTCGAAAATTATGGCGTATCGTCACGGGAGATATTACCAAACCTGTCAAACCTATTGTCCATGAAACCAGTGCAGAGGATATTCAGTACATTGAAAGACTTGAGGATTGGGACAGCAAAAATCACCAAATTATCACTTGGTTGGGTAATACTTCTATTCCAGCCATCCACACTCAGTTTGATGCTTTTGATAGTGCAAAAGAACTCTGGGATTTTCTATACACACGTTTTCAGTCTATAGGACTGGCTCATTATTATCAGCTGCATTCTACACTTGTTAGTCTCAATCAGGAGGTAGGACAATCTGTGAATGAATATCTCGCCACTCTTCAGCCTATCTGGACTCAGTTGGAGCAGGCAAAAATTAGCCCTGACCATATTCGTCTCATCAAAGTATTAATGGGTCTTCGACCAGAATATGAATCCGTTCGTGCTGCTCTGTTACATCGTAATCCTCTGCCATCTCTTGATGCTGCTGTTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCTCTGCACTCTGATGTCGCCCTTGCAACTACTCATCTCCGACAAGCTAATGAGACCATCTTTTGTAAGAATTGCAAACTTCATGGTCATAAGTTTGCTAACTGTCCTACCATTGAGTGCAGGTATTGTCACAAACGAGGTCATATTTTGGATAATTGTCCAACACGCCCACCCCGCCCTCCTGGTCATTCACACAAACCCAAGTTTTCCCATAAAGCGGGTTCTTCATCTGTTGTTGCTGCCGCTACATCATCTGACATCACTGAACCTTCGAGTCTTCAGTTGACTGATCTTCATGATTTACTGAAACAGGTGATCTCTTCCCAATCCACTGCTCTTGCTGTCACCCCAGAACCAATTTCATATCCTTCTTCCCCATGTGCCAAGATTCCAATATCAATGTCATAA

Coding sequence (CDS)

ATGGAGAAAAATGACGTAGCTCGCCCCATTAGCACCATCCTTGATGGCACCAACTATATTACCTGGGCCCACCAAATGAGGAGTTTTCTAATAGGTCGAAAATTATGGCGTATCGTCACGGGAGATATTACCAAACCTGTCAAACCTATTGTCCATGAAACCAGTGCAGAGGATATTCAGTACATTGAAAGACTTGAGGATTGGGACAGCAAAAATCACCAAATTATCACTTGGTTGGGTAATACTTCTATTCCAGCCATCCACACTCAGTTTGATGCTTTTGATAGTGCAAAAGAACTCTGGGATTTTCTATACACACGTTTTCAGTCTATAGGACTGGCTCATTATTATCAGCTGCATTCTACACTTGTTAGTCTCAATCAGGAGGTAGGACAATCTGTGAATGAATATCTCGCCACTCTTCAGCCTATCTGGACTCAGTTGGAGCAGGCAAAAATTAGCCCTGACCATATTCGTCTCATCAAAGTATTAATGGGTCTTCGACCAGAATATGAATCCGTTCGTGCTGCTCTGTTACATCGTAATCCTCTGCCATCTCTTGATGCTGCTGTTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCTCTGCACTCTGATGTCGCCCTTGCAACTACTCATCTCCGACAAGCTAATGAGACCATCTTTTGTAAGAATTGCAAACTTCATGGTCATAAGTTTGCTAACTGTCCTACCATTGAGTGCAGGTATTGTCACAAACGAGGTCATATTTTGGATAATTGTCCAACACGCCCACCCCGCCCTCCTGGTCATTCACACAAACCCAAGTTTTCCCATAAAGCGGGTTCTTCATCTGTTGTTGCTGCCGCTACATCATCTGACATCACTGAACCTTCGAGTCTTCAGTTGACTGATCTTCATGATTTACTGAAACAGGTGATCTCTTCCCAATCCACTGCTCTTGCTGTCACCCCAGAACCAATTTCATATCCTTCTTCCCCATGTGCCAAGATTCCAATATCAATGTCATAA

Protein sequence

MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQLTDLHDLLKQVISSQSTALAVTPEPISYPSSPCAKIPISMS
Homology
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BLAST of MELO3C030315 vs. NCBI nr
Match: XP_008445037.1 (PREDICTED: uncharacterized protein LOC103488200 [Cucumis melo])

HSP 1 Score: 656.0 bits (1691), Expect = 1.8e-184
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
           MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
           YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
           STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
           RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300
           PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL
Sbjct: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300

Query: 301 TDLHDLLKQVISSQSTALAVTP 323
           TDLHDLLKQVISSQSTALAVTP
Sbjct: 301 TDLHDLLKQVISSQSTALAVTP 322

[Close]
BLAST of MELO3C030315 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 647.9 bits (1670), Expect = 4.9e-182
Identity = 319/322 (99.07%), Postives = 321/322 (99.69%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
           MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
           YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
           STLVSLNQE+GQSVNEYLATLQPIWTQL+QAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121 STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
           RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300
           PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAAT SDITEPSSLQL
Sbjct: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAAT-SDITEPSSLQL 300

Query: 301 TDLHDLLKQVISSQSTALAVTP 323
           TDLHDLLKQVISSQSTALAVTP
Sbjct: 301 TDLHDLLKQVISSQSTALAVTP 321

[Close]
BLAST of MELO3C030315 vs. NCBI nr
Match: KAA0036574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 646.0 bits (1665), Expect = 1.9e-181
Identity = 318/322 (98.76%), Postives = 320/322 (99.38%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
           MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
           YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
           STLVSLNQE+GQSVNEYLATLQPIWTQL+QAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121 STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEPVRAALLH 180

Query: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
           RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300
           PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAAT SDITEPSSLQL
Sbjct: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAAT-SDITEPSSLQL 300

Query: 301 TDLHDLLKQVISSQSTALAVTP 323
           TDLHDLLKQVISSQSTALAVTP
Sbjct: 301 TDLHDLLKQVISSQSTALAVTP 321

[Close]
BLAST of MELO3C030315 vs. NCBI nr
Match: KAA0058316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 635.6 bits (1638), Expect = 2.5e-178
Identity = 313/322 (97.20%), Postives = 318/322 (98.76%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
           MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAE+IQ
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAENIQ 60

Query: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
           YIE+LEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAK+LWDFLYTRFQSIGLAHYYQLH
Sbjct: 61  YIEKLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKKLWDFLYTRFQSIGLAHYYQLH 120

Query: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
           STLVSLNQEVGQSVNEYLATLQPIWTQL+QAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEFVRAALLH 180

Query: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
           RN LPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181 RNSLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300
           PTIEC+YCHKRGHILDNCPTRPPRPPGHSHKPKF HKAGSSSVVAAAT SDITEPSSLQL
Sbjct: 241 PTIECKYCHKRGHILDNCPTRPPRPPGHSHKPKFFHKAGSSSVVAAAT-SDITEPSSLQL 300

Query: 301 TDLHDLLKQVISSQSTALAVTP 323
           TDLHDLLKQVISSQSTALAVTP
Sbjct: 301 TDLHDLLKQVISSQSTALAVTP 321

[Close]
BLAST of MELO3C030315 vs. NCBI nr
Match: KAA0047794.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.5 bits (1560), Expect = 2.8e-169
Identity = 303/344 (88.08%), Postives = 310/344 (90.12%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP----------- 60
           MEKN VARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP           
Sbjct: 1   MEKNYVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTFPMKNTSKNN 60

Query: 61  -----------IVHETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAK 120
                      IVHE + EDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFD FDSAK
Sbjct: 61  TEHNDANTSDIIVHEPTVEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDTFDSAK 120

Query: 121 ELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHI 180
           ELW+FLYTRFQSIGLAHYYQLHSTLV+LNQEVGQSVNEYL T QPIWTQL+QAKISPDHI
Sbjct: 121 ELWNFLYTRFQSIGLAHYYQLHSTLVNLNQEVGQSVNEYLVTFQPIWTQLDQAKISPDHI 180

Query: 181 RLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHL 240
           RLIKVLMGLR EYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSL SDVALATTH+
Sbjct: 181 RLIKVLMGLRSEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLPSDVALATTHI 240

Query: 241 RQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKA 300
           RQANET FCKNCKLHGHKFANCPTIECRYC+KRGHILDNCPTRPPRPP HSHK KFSHK 
Sbjct: 241 RQANETSFCKNCKLHGHKFANCPTIECRYCYKRGHILDNCPTRPPRPPSHSHKHKFSHKV 300

Query: 301 GSSSVVAAATSSDITEPSSLQLTDLHDLLKQVISSQSTALAVTP 323
           GSSSVVAAATSSDITEPSSLQLTDLHDLLKQV+SSQSTALAVTP
Sbjct: 301 GSSSVVAAATSSDITEPSSLQLTDLHDLLKQVLSSQSTALAVTP 344

[Close]
BLAST of MELO3C030315 vs. ExPASy TrEMBL
Match: A0A1S3BBA1 (uncharacterized protein LOC103488200 OS=Cucumis melo OX=3656 GN=LOC103488200 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 8.7e-185
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
           MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
           YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
           STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
           RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300
           PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL
Sbjct: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300

Query: 301 TDLHDLLKQVISSQSTALAVTP 323
           TDLHDLLKQVISSQSTALAVTP
Sbjct: 301 TDLHDLLKQVISSQSTALAVTP 322

[Close]
BLAST of MELO3C030315 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 2.4e-182
Identity = 319/322 (99.07%), Postives = 321/322 (99.69%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
           MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
           YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
           STLVSLNQE+GQSVNEYLATLQPIWTQL+QAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121 STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
           RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300
           PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAAT SDITEPSSLQL
Sbjct: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAAT-SDITEPSSLQL 300

Query: 301 TDLHDLLKQVISSQSTALAVTP 323
           TDLHDLLKQVISSQSTALAVTP
Sbjct: 301 TDLHDLLKQVISSQSTALAVTP 321

[Close]
BLAST of MELO3C030315 vs. ExPASy TrEMBL
Match: A0A5A7SZ66 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00840 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 9.0e-182
Identity = 318/322 (98.76%), Postives = 320/322 (99.38%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
           MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
           YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
           STLVSLNQE+GQSVNEYLATLQPIWTQL+QAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121 STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEPVRAALLH 180

Query: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
           RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300
           PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAAT SDITEPSSLQL
Sbjct: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAAT-SDITEPSSLQL 300

Query: 301 TDLHDLLKQVISSQSTALAVTP 323
           TDLHDLLKQVISSQSTALAVTP
Sbjct: 301 TDLHDLLKQVISSQSTALAVTP 321

[Close]
BLAST of MELO3C030315 vs. ExPASy TrEMBL
Match: A0A5A7UVX4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006520 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178
Identity = 313/322 (97.20%), Postives = 318/322 (98.76%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
           MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAE+IQ
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAENIQ 60

Query: 61  YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
           YIE+LEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAK+LWDFLYTRFQSIGLAHYYQLH
Sbjct: 61  YIEKLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKKLWDFLYTRFQSIGLAHYYQLH 120

Query: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
           STLVSLNQEVGQSVNEYLATLQPIWTQL+QAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121 STLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEFVRAALLH 180

Query: 181 RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
           RN LPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181 RNSLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241 PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSSLQL 300
           PTIEC+YCHKRGHILDNCPTRPPRPPGHSHKPKF HKAGSSSVVAAAT SDITEPSSLQL
Sbjct: 241 PTIECKYCHKRGHILDNCPTRPPRPPGHSHKPKFFHKAGSSSVVAAAT-SDITEPSSLQL 300

Query: 301 TDLHDLLKQVISSQSTALAVTP 323
           TDLHDLLKQVISSQSTALAVTP
Sbjct: 301 TDLHDLLKQVISSQSTALAVTP 321

[Close]
BLAST of MELO3C030315 vs. ExPASy TrEMBL
Match: A0A5A7TXR0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00330 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.3e-169
Identity = 303/344 (88.08%), Postives = 310/344 (90.12%), Query Frame = 0 

Query: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP----------- 60
           MEKN VARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP           
Sbjct: 1   MEKNYVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTFPMKNTSKNN 60

Query: 61  -----------IVHETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAK 120
                      IVHE + EDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFD FDSAK
Sbjct: 61  TEHNDANTSDIIVHEPTVEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDTFDSAK 120

Query: 121 ELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISPDHI 180
           ELW+FLYTRFQSIGLAHYYQLHSTLV+LNQEVGQSVNEYL T QPIWTQL+QAKISPDHI
Sbjct: 121 ELWNFLYTRFQSIGLAHYYQLHSTLVNLNQEVGQSVNEYLVTFQPIWTQLDQAKISPDHI 180

Query: 181 RLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHL 240
           RLIKVLMGLR EYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSL SDVALATTH+
Sbjct: 181 RLIKVLMGLRSEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLPSDVALATTHI 240

Query: 241 RQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKA 300
           RQANET FCKNCKLHGHKFANCPTIECRYC+KRGHILDNCPTRPPRPP HSHK KFSHK 
Sbjct: 241 RQANETSFCKNCKLHGHKFANCPTIECRYCYKRGHILDNCPTRPPRPPSHSHKHKFSHKV 300

Query: 301 GSSSVVAAATSSDITEPSSLQLTDLHDLLKQVISSQSTALAVTP 323
           GSSSVVAAATSSDITEPSSLQLTDLHDLLKQV+SSQSTALAVTP
Sbjct: 301 GSSSVVAAATSSDITEPSSLQLTDLHDLLKQVLSSQSTALAVTP 344

The following BLAST results are available for this feature:
BLAST of MELO3C030315 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445037.11.8e-184100.00PREDICTED: uncharacterized protein LOC103488200 [Cucumis melo][more]
KAA0043149.14.9e-18299.07Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0036574.11.9e-18198.76Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0058316.12.5e-17897.20Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0047794.12.8e-16988.08putative mitochondrial protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C030315 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030315 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BBA18.7e-185100.00uncharacterized protein LOC103488200 OS=Cucumis melo OX=3656 GN=LOC103488200 PE=... [more]
A0A5D3DG182.4e-18299.07Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7SZ669.0e-18298.76Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7UVX41.2e-17897.20Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7TXR01.3e-16988.08Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
BLAST of MELO3C030315 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 226..242
e-value: 1.2
score: 10.8
coord: 244..260
e-value: 0.032
score: 20.4
NoneNo IPR availableGENE3D4.10.60.10coord: 211..264
e-value: 3.3E-7
score: 32.0
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 68..200
e-value: 1.1E-11
score: 44.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..280
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 67..302
NoneNo IPR availablePANTHERPTHR34222:SF6OS02G0671800 PROTEINcoord: 67..302
IPR025314Domain of unknown function DUF4219PFAMPF13961DUF4219coord: 14..39
e-value: 2.3E-8
score: 33.6
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 217..262

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030315.1MELO3C030315.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding