MELO3C030247 (gene) Melon (DHL92) v4

Overview
NameMELO3C030247
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Locationchr11: 20344502 .. 20345634 (-)
RNA-Seq ExpressionMELO3C030247
SyntenyMELO3C030247
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGAACAATTACGTTAGTTTTAGTATATCTAAAATTACAGTTAATGAACATATGTGCTATAAAGTATTGTACATTAGCCTTAGATCCAAGTTAGGCAGTATTATTGACATGAACAACATTGATATATACATTTGCCTAGGTCTTATAGAATGTGTTAAGAAGGATTTGGCTATAACAAATGATAACAATGTTAAATGAGTTTACCATATAATAGCATCGAATGTTGAGCGAAATATTGTCCTTATTATTCATTCTTTTGGTCCTTTATCGATTTGTTTGGGTTCATTGTCGTCAAGTTCTTTTAAAACTCAAATCCATGATGATGGAGATTTTTTTTTTTTTTTGAAAACATAGATATGTTTAAGGTATATTTCAACTTTGCACTGGAAATCCACAACATGTTTTCAACCAAATATTTGTTTAAATAGTGCGTACAAGTCATTGCTCTTAGAGACAATTTTCAATACATTACTATAAAATCAAACAAAGAAGTTATGATTTTGCAATGCATAATTGAAAATTGCAAATGATCATTGTGTGCTTCTTGTTGTATTCATGGGGATAGGACATTATGGGTTCTTCCTAGATTTGATCCTGAAAATACATGTTTAGTAGATGTTCCATTGACAAATCATAGATAGACCACATTTACTTTTACCAAGGACCCAATTAAGAAAAAGATAACTTTAACTCACTCTGAATTGTCAACTCCCAAAGATATTGTTCATTACATTCGTGTTGAACATGGTTTAAGCATATCTTACCAAAAAGCATAAAGTGCACTTGAGGCTGTGTTGGATGAGATTCGAGGATCTCCGGAGGACTCCTACAAGATGGTACCTAAATTTGCTTACATATTGGAACTCAACAACTTAGGTATATTGGCAATATGCATATTCATATATGTAGTTATTTTTTCATCATATATTTACATATTTGTTATGTTTATAGGTTATGTTGTTGAATATAAAGTTGATGCATATGGTAGATTTATTTACTTCTTCGTGGCATTATCTGCTTCCATTTCTGGTTGGTAACATTGTCGTCCAGTCATTTCTATTGATGGAACAAGTCTGAAAAATAAGTACGGTGTTATTCTTTTATCTACTTTAACACCTGATGCCAATG

mRNA sequence

ATGAATCGAACAATTACGTTAGTTTTAGTATATCTAAAATTACAGTTAATGAACATATGTGCTATAAAGTATTGTACATTAGCCTTAGATCCAAGTTATGTTGTTGAATATAAAGTTGATGCATATGGTAGATTTATTTACTTCTTCGTGGCATTATCTGCTTCCATTTCTGGTTGGTAACATTGTCGTCCAGTCATTTCTATTGATGGAACAAGTCTGAAAAATAAGTACGGTGTTATTCTTTTATCTACTTTAACACCTGATGCCAATG

Coding sequence (CDS)

ATGAATCGAACAATTACGTTAGTTTTAGTATATCTAAAATTACAGTTAATGAACATATGTGCTATAAAGTATTGTACATTAGCCTTAGATCCAAGTTATGTTGTTGAATATAAAGTTGATGCATATGGTAGATTTATTTACTTCTTCGTGGCATTATCTGCTTCCATTTCTGGTTGGTAA

Protein sequence

MNRTITLVLVYLKLQLMNICAIKYCTLALDPSYVVEYKVDAYGRFIYFFVALSASISGW
Homology
[Close]
BLAST of MELO3C030247 vs. NCBI nr
Match: KAA0062727.1 (protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 7.1e-04
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30  DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
           +P YV+EYKVDA GRF+YFF+ALSASI GW
Sbjct: 148 NPGYVIEYKVDADGRFLYFFMALSASIFGW 177

[Close]
BLAST of MELO3C030247 vs. NCBI nr
Match: KAA0054174.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 7.1e-04
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30  DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
           +P YVVEYKVDA GRF+YFF+ALSASIS W
Sbjct: 121 NPGYVVEYKVDADGRFLYFFMALSASISDW 150

[Close]
BLAST of MELO3C030247 vs. NCBI nr
Match: XP_008461035.1 (PREDICTED: uncharacterized protein LOC103499740 [Cucumis melo])

HSP 1 Score: 53.5 bits (127), Expect = 7.1e-04
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30  DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
           D SYV+EYKVDA GRF+YFF+ LSASISGW
Sbjct: 131 DLSYVIEYKVDADGRFLYFFMELSASISGW 160

[Close]
BLAST of MELO3C030247 vs. NCBI nr
Match: KAA0060373.1 (protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa] >TYK22113.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 7.1e-04
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30 DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
          +P YVV+YKVD  GRF+YFF+ALSASISGW
Sbjct: 13 NPGYVVKYKVDVNGRFLYFFMALSASISGW 42

[Close]
BLAST of MELO3C030247 vs. NCBI nr
Match: TYK22525.1 (protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 7.1e-04
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30  DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
           +P YV+EYKVDA GRF+YFF+ALSASI GW
Sbjct: 148 NPGYVIEYKVDADGRFLYFFMALSASIFGW 177

[Close]
BLAST of MELO3C030247 vs. ExPASy TrEMBL
Match: A0A5D3DF01 (Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001100 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-04
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30 DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
          +P YVV+YKVD  GRF+YFF+ALSASISGW
Sbjct: 13 NPGYVVKYKVDVNGRFLYFFMALSASISGW 42

[Close]
BLAST of MELO3C030247 vs. ExPASy TrEMBL
Match: A0A5A7V6U1 (Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G00560 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-04
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30  DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
           +P YV+EYKVDA GRF+YFF+ALSASI GW
Sbjct: 148 NPGYVIEYKVDADGRFLYFFMALSASIFGW 177

[Close]
BLAST of MELO3C030247 vs. ExPASy TrEMBL
Match: A0A5D3DG45 (Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00050 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-04
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30  DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
           +P YV+EYKVDA GRF+YFF+ALSASI GW
Sbjct: 148 NPGYVIEYKVDADGRFLYFFMALSASIFGW 177

[Close]
BLAST of MELO3C030247 vs. ExPASy TrEMBL
Match: A0A5A7UG79 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001030 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-04
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30  DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
           +P YVVEYKVDA GRF+YFF+ALSASIS W
Sbjct: 121 NPGYVVEYKVDADGRFLYFFMALSASISDW 150

[Close]
BLAST of MELO3C030247 vs. ExPASy TrEMBL
Match: A0A1S3CF11 (uncharacterized protein LOC103499740 OS=Cucumis melo OX=3656 GN=LOC103499740 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-04
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 30  DPSYVVEYKVDAYGRFIYFFVALSASISGW 60
           D SYV+EYKVDA GRF+YFF+ LSASISGW
Sbjct: 131 DLSYVIEYKVDADGRFLYFFMELSASISGW 160

The following BLAST results are available for this feature:
BLAST of MELO3C030247 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C030247 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062727.17.1e-0476.67protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa][more]
KAA0054174.17.1e-0480.00protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa][more]
XP_008461035.17.1e-0480.00PREDICTED: uncharacterized protein LOC103499740 [Cucumis melo][more]
KAA0060373.17.1e-0476.67protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa] >TYK22113.1 prot... [more]
TYK22525.17.1e-0476.67protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C030247 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DF013.4e-0476.67Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7V6U13.4e-0476.67Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5D3DG453.4e-0476.67Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7UG793.4e-0480.00Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3CF113.4e-0480.00uncharacterized protein LOC103499740 OS=Cucumis melo OX=3656 GN=LOC103499740 PE=... [more]
BLAST of MELO3C030247 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030247.1MELO3C030247.1mRNA