MELO3C030094 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030094
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr10: 23466254 .. 23467132 (-)
RNA-Seq Expression	MELO3C030094
Synteny	MELO3C030094

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCGAAGATGTTTCGCCATTCTGTGTCACCTATTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGCACACAACGTGAAAAATCGTGTCATTCTACGAGAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGTCGTCATTCGACTTCATGAAGAGCTTTTGAAAAAACCACAACCAGTGCCTAATGATTGCACAAATCAAAGATGGAGGTAGTTTGACGTACACATTTATCTCGAACTACGTACTTCCAACACAACGACGTTAGTTCTTCTCAATAATTTTAGTTATGCGTTGCAGAATTGCCTAGGTGCATTAGATGGAACATACATAAAAGTCAACGTTCTAGCAAGTGATCGGGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTAGCGTGTGTGACACGAAAGGAGATTTTGTTTACGTACTTGTCGGTTGGGAAGGATCAGCTGCGGACTCACGCATCCTCCGTGATGCCCTTTCAAGACTAATGGCCTGAAGGTGCCCAAGGGTAACTAACAACGGCATTGTACCTATGAATGCAATTTTTCAATTAACAGCTACGACATTTTAATTGTGCATTGTGATCACAGGCTATTACTACCTGGTTGATGCCGGGTACCCAAATGCGGAGGGTTTCCTGGCACCATACAGAGGCCAAGGCTATCACTTGCAAGAATGGTGTGGCCTTGAAAATGCACCTTCAACGTCGAAAGAGTTCTTCAATATGAAGCATTTGTCTGCTCGTAATGTAATCAAAAGAGCATTAGGTGTCTTGAAGGGTCGAAGGGCGATACTG

mRNA sequence

ATGGACCGAAGATGTTTCGCCATTCTGTGTCACCTATTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGCACACAACGTGAAAAATCGTGTCATTCTACGAGAGTTCATGCGTTATGCGTTGCAGAATTGCCTAGGTGCATTAGATGGAACATACATAAAAGTCAACGTTCTAGCAAGTGATCGGGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTAGCGTGTGTGACACGAAAGGAGATTTTGTTTACGTACTTGTCGGTTGGGAAGGATCAGCTGCGGACTCACGCATCCTCCGTGATGCCCTTTCAAGACTAATGGCCTGAAGGTGCCCAAGGGCTATTACTACCTGGTTGATGCCGGGTACCCAAATGCGGAGGGTTTCCTGGCACCATACAGAGGCCAAGGCTATCACTTGCAAGAATGGTGTGGCCTTGAAAATGCACCTTCAACGTCGAAAGAGTTCTTCAATATGAAGCATTTGTCTGCTCGTAATGTAATCAAAAGAGCATTAGGTGTCTTGAAGGGTCGAAGGGCGATACTG

Coding sequence (CDS)

ATGGACCGAAGATGTTTCGCCATTCTGTGTCACCTATTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGCACACAACGTGAAAAATCGTGTCATTCTACGAGAGTTCATGCGTTATGCGTTGCAGAATTGCCTAGGTGCATTAGATGGAACATACATAAAAGTCAACGTTCTAGCAAGTGATCGGGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTAGCGTGTGTGACACGAAAGGAGATTTTGTTTACGTACTTGTCGGTTGGGAAGGATCAGCTGCGGACTCACGCATCCTCCGTGATGCCCTTTCAAGACTAATGGCCTGA

Protein sequence

MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMRYALQNCLGALDGTYIKVNVLASDRARYRTRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRDALSRLMA

Homology

[Close]

BLAST of MELO3C030094 vs. NCBI nr
Match: KAA0055437.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK08919.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 109/124 (87.90%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMRYALQNCL 60
           MDRRCFAILCHLLRT+AGLTSTEVVDVEEMVAMFLHI+ H+VKN VI +EFMRYALQNCL
Sbjct: 1   MDRRCFAILCHLLRTVAGLTSTEVVDVEEMVAMFLHIVVHDVKNCVIQQEFMRYALQNCL 60

Query: 61  GALDGTYIKVNVLASDRARYRTRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRD 120
           GALDGTYIKVNV ASD+ARYRT KGE+ATNVL VCDTKGDFVYVLVGW+GS ADSRILRD
Sbjct: 61  GALDGTYIKVNVSASDQARYRTHKGEMATNVLGVCDTKGDFVYVLVGWKGSIADSRILRD 120

Query: 121 ALSR 125
           A+SR
Sbjct: 121 AISR 124

[Close]

BLAST of MELO3C030094 vs. NCBI nr
Match: KAA0054126.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53
Identity = 119/159 (74.84%), Postives = 119/159 (74.84%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMR------- 60
           MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMR       
Sbjct: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMRSGETISR 60

Query: 61  ---------------------------------YALQNCLGALDGTYIKVNVLASDRARY 120
                                            YALQNCLGALDGTYIKVNVLASDRARY
Sbjct: 61  HFNMVLLVVIRLHEELLKKPQPVPNDCTNQRWSYALQNCLGALDGTYIKVNVLASDRARY 120

[Close]

BLAST of MELO3C030094 vs. NCBI nr
Match: KAA0054690.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 3.0e-52
Identity = 117/164 (71.34%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMR------- 60
           MDRRCFAILCHLLRTIAGLTSTEVVDV+EMVAMFLHILAH+VKNRVI REFMR       
Sbjct: 45  MDRRCFAILCHLLRTIAGLTSTEVVDVKEMVAMFLHILAHDVKNRVIQREFMRSGETISR 104

Query: 61  ---------------------------------YALQNCLGALDGTYIKVNVLASDRARY 120
                                            YA+QNCLGALDGTYIKVNV ASDRARY
Sbjct: 105 HFNMVLLAVIRLHEELLKKPQPVPNECTNQRWSYAVQNCLGALDGTYIKVNVPASDRARY 164

Query: 121 RTRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRDALSR 125
           RTRKGEVATNVL VCDTKGDFVYVL GWEGSAADSRILRDALSR
Sbjct: 165 RTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSR 208

[Close]

BLAST of MELO3C030094 vs. NCBI nr
Match: KAA0065286.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 2.6e-51
Identity = 116/164 (70.73%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMR------- 60
           MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAH+VKNRVI REFMR       
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  --------------------------------YALQNCLGALDGTYIKVNVLASDRARYR 120
                                              +NCLGALDGTYIKVNV ASDRARYR
Sbjct: 127 HFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRDALSRL 126
           TRKGEVATNVL VCDTKGDFVYVL GWEGSAADSRILRDALSRL
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRL 230

[Close]

BLAST of MELO3C030094 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 210.7 bits (535), Expect = 7.4e-51
Identity = 115/163 (70.55%), Postives = 117/163 (71.78%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMRYA----- 60
           MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAH+VKNRVI REFMR       
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  ----------------------------------LQNCLGALDGTYIKVNVLASDRARYR 120
                                              +NCLGALDGTYIKVNV ASDRARYR
Sbjct: 127 HFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRDALSR 125
           TRKGEVATNVL VCDTKGDFVYVL GWEGSAADSRILRDALSR
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSR 229

[Close]

BLAST of MELO3C030094 vs. ExPASy TrEMBL
Match: A0A5A7ULI4 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00070 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.0e-55
Identity = 109/124 (87.90%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMRYALQNCL 60
           MDRRCFAILCHLLRT+AGLTSTEVVDVEEMVAMFLHI+ H+VKN VI +EFMRYALQNCL
Sbjct: 1   MDRRCFAILCHLLRTVAGLTSTEVVDVEEMVAMFLHIVVHDVKNCVIQQEFMRYALQNCL 60

Query: 61  GALDGTYIKVNVLASDRARYRTRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRD 120
           GALDGTYIKVNV ASD+ARYRT KGE+ATNVL VCDTKGDFVYVLVGW+GS ADSRILRD
Sbjct: 61  GALDGTYIKVNVSASDQARYRTHKGEMATNVLGVCDTKGDFVYVLVGWKGSIADSRILRD 120

Query: 121 ALSR 125
           A+SR
Sbjct: 121 AISR 124

[Close]

BLAST of MELO3C030094 vs. ExPASy TrEMBL
Match: A0A5A7UIM7 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00420 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 119/159 (74.84%), Postives = 119/159 (74.84%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMR------- 60
           MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMR       
Sbjct: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMRSGETISR 60

Query: 61  ---------------------------------YALQNCLGALDGTYIKVNVLASDRARY 120
                                            YALQNCLGALDGTYIKVNVLASDRARY
Sbjct: 61  HFNMVLLVVIRLHEELLKKPQPVPNDCTNQRWSYALQNCLGALDGTYIKVNVLASDRARY 120

[Close]

BLAST of MELO3C030094 vs. ExPASy TrEMBL
Match: A0A5A7UHD9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G005150 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 117/164 (71.34%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMR------- 60
           MDRRCFAILCHLLRTIAGLTSTEVVDV+EMVAMFLHILAH+VKNRVI REFMR       
Sbjct: 45  MDRRCFAILCHLLRTIAGLTSTEVVDVKEMVAMFLHILAHDVKNRVIQREFMRSGETISR 104

Query: 61  ---------------------------------YALQNCLGALDGTYIKVNVLASDRARY 120
                                            YA+QNCLGALDGTYIKVNV ASDRARY
Sbjct: 105 HFNMVLLAVIRLHEELLKKPQPVPNECTNQRWSYAVQNCLGALDGTYIKVNVPASDRARY 164

Query: 121 RTRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRDALSR 125
           RTRKGEVATNVL VCDTKGDFVYVL GWEGSAADSRILRDALSR
Sbjct: 165 RTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSR 208

[Close]

BLAST of MELO3C030094 vs. ExPASy TrEMBL
Match: A0A5A7VG29 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3818G00010 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 116/164 (70.73%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMR------- 60
           MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAH+VKNRVI REFMR       
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  --------------------------------YALQNCLGALDGTYIKVNVLASDRARYR 120
                                              +NCLGALDGTYIKVNV ASDRARYR
Sbjct: 127 HFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRDALSRL 126
           TRKGEVATNVL VCDTKGDFVYVL GWEGSAADSRILRDALSRL
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRL 230

[Close]

BLAST of MELO3C030094 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.6e-51
Identity = 115/163 (70.55%), Postives = 117/163 (71.78%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMRYA----- 60
           MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAH+VKNRVI REFMR       
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  ----------------------------------LQNCLGALDGTYIKVNVLASDRARYR 120
                                              +NCLGALDGTYIKVNV ASDRARYR
Sbjct: 127 HFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRDALSR 125
           TRKGEVATNVL VCDTKGDFVYVL GWEGSAADSRILRDALSR
Sbjct: 187 TRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSR 229

[Close]

BLAST of MELO3C030094 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 1.7e-13
Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 57  QNCLGALDGTYIKVNVLASDRARYRTRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSR 116
           ++C+GA+D T+I   V       +R RKG+++ N+L+ C+   +F+YVL GWEGSA DS+
Sbjct: 23  KDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSK 82

Query: 117 ILRDALSR 125
           +L DAL+R
Sbjct: 83  VLNDALTR 90

[Close]

BLAST of MELO3C030094 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 3.3e-12
Identity = 46/162 (28.40%), Postives = 72/162 (44.44%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNRVILREFMRYA----- 60
           MD+  F  LC LL+T   L  T  + +E  +A+FL I+ HN++ R + +E   Y+     
Sbjct: 48  MDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAV-QELFCYSGETIS 107

Query: 61  ---------------------------------LQNCLGALDGTYIKVNVLASDRARYRT 120
                                             ++C+G +D  +I V V   ++  +R 
Sbjct: 108 RHFNNVLNAVIAISKDFFQPNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVDEQGPFRN 167

Query: 121 RKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRDALSR 125
             G +  NVL+       F YVL GWEGSA+D ++L  AL+R
Sbjct: 168 GNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTR 208

[Close]

BLAST of MELO3C030094 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 45/167 (26.95%), Postives = 66/167 (39.52%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHNVKNR-----------VILR 60
           M   CF  LC++L+T   L  T  + +EE VAMFL I  HN   R            + R
Sbjct: 72  MSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRNQETVQR 131

Query: 61  EF---------------------------------MRY--ALQNCLGALDGTYIKVNVLA 120
           +F                                  RY       +GA+DGT++ V V  
Sbjct: 132 KFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKP 191

Query: 121 SDRARYRTRKGEVATNVLSVCDTKGDFVYVLVGWEGSAADSRILRDA 122
             +  Y  R    + N++++CD K  F Y+  G  GS  D+ +L+ A
Sbjct: 192 DLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVLQIA 238

[Close]

BLAST of MELO3C030094 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 40.8 bits (94), Expect = 9.5e-04
Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = 0


Query: 101 FVYVLVGWEGSAADSRILRDALSR 125
           F+YVL GWEGSA DSR+L DAL +
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK 48

The following BLAST results are available for this feature:

BLAST of MELO3C030094 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055437.1	1.4e-54	87.90	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK08919.1 putative nucleas...	[more]
KAA0054126.1	2.1e-53	74.84	putative nuclease HARBI1 [Cucumis melo var. makuwa]	[more]
KAA0054690.1	3.0e-52	71.34	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0065286.1	2.6e-51	70.73	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035620.1	7.4e-51	70.55	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]

BLAST of MELO3C030094 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C030094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ULI4	7.0e-55	87.90	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7UIM7	1.0e-53	74.84	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7UHD9	1.5e-52	71.34	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VG29	1.2e-51	70.73	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TXW1	3.6e-51	70.55	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C030094 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28950.1	1.7e-13	45.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G41980.1	3.3e-12	28.40	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	1.3e-08	26.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	9.5e-04	70.83	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 63..120 e-value: 7.5E-7 score: 28.9
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 1..53 coord: 57..125
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 1..53 coord: 57..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030094.1	MELO3C030094.1	mRNA