MELO3C030056 (gene) Melon (DHL92) v4

Overview
NameMELO3C030056
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRING-H2 finger protein ATL20-like
Locationchr06: 8508153 .. 8509189 (-)
RNA-Seq ExpressionMELO3C030056
SyntenyMELO3C030056
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGTTAATGCCATTTGTTTAATTAGAATCTACAAAACCAACTTTCCATTTCTTTAGAAGACAATATATAAATCCACAACCAATATTATACAAACCCCTTCTTCTTCTTCTCCCTTTTTTACTTTAAAAGAAATAAAAATAAATGATGCTTCATTATCATCTCCTCTTCCCCTGCTTTCTCTGCTTTCTCTGCTTCTTCAACCTCACAACAACCTCAGAACTCTGTTTCGACTCCACCTGCAATGGCAATTTTCAAACCATCCGATTCCCTTTCAGAATTCAAAACAAACAACCAAAATCATGTGGGTATCCCGGGTTTGACTTAACATGTCATCCCACAGGTCAACCATTAATCCATCTTCCACTTTCAGGGGAATTCATAGTTCAATACATAGATTATCAGAACCAAGAAATTTGGGTCAATGATCCAAACAACTGTCTTCCTCGAAAGATTCTGTCTCTTATGCTTTTTGGGTCGCCGTTTGATGCGAAAAACACTGTAGATTTCACCTTCTTTAATTGTTCGGGGAGTGATGAAATCCCATATGATTTCAATTTGAACCCAATTTCTTGCCTTAGTGGATTGTCGTATGCAGTTTTTGCTTCTTCTTCTTCAATGGTGAATGGGATTTTGTCGTCGAGGTGTGAGTTGGTGAAGACTGTATCGGTGCCGATGAGTTCGGAATCGTATTCATGGGATTTGGATTTGAGAAATGATCTGAGATTGGTGTGGAAAAAGCCTAACTGTAAGAAGTGCGAGTTAAATGGAGGAGTATGTGGGATTAAACCCAATTCAACAAATGAAATTCAATGCAAATACAATACTTCAACTCCAAGTGGTACGTTTCTTTCTTTTGTTCATATTGTCTTTTCTTCCCTTTATACGTACCTTTTTAGGTCGGTTCGAGAGTAGTTGTTATAATTCTCGGTTATATAATTTAGAGGTGTGATTATTTTAATTTAGGTTAAGCTAAATGTAAACTATTTTAGTTTTTAGTTTTTTTTTTTTTTTTTTTTTTGAAAAAAATAAATGTTAA

mRNA sequence

TTAGTTAATGCCATTTGTTTAATTAGAATCTACAAAACCAACTTTCCATTTCTTTAGAAGACAATATATAAATCCACAACCAATATTATACAAACCCCTTCTTCTTCTTCTCCCTTTTTTACTTTAAAAGAAATAAAAATAAATGATGCTTCATTATCATCTCCTCTTCCCCTGCTTTCTCTGCTTTCTCTGCTTCTTCAACCTCACAACAACCTCAGAACTCTGTTTCGACTCCACCTGCAATGGCAATTTTCAAACCATCCGATTCCCTTTCAGAATTCAAAACAAACAACCAAAATCATGTGGGTATCCCGGGTTTGACTTAACATGTCATCCCACAGGTCAACCATTAATCCATCTTCCACTTTCAGGGGAATTCATAGTTCAATACATAGATTATCAGAACCAAGAAATTTGGGTCAATGATCCAAACAACTGTCTTCCTCGAAAGATTCTGTCTCTTATGCTTTTTGGGTCGCCGTTTGATGCGAAAAACACTGTAGATTTCACCTTCTTTAATTGTTCGGGGAGTGATGAAATCCCATATGATTTCAATTTGAACCCAATTTCTTGCCTTAGTGGATTGTCGTATGCAGTTTTTGCTTCTTCTTCTTCAATGGTGAATGGGATTTTGTCGTCGAGGTGTGAGTTGGTGAAGACTGTATCGGTGCCGATGAGTTCGGAATCGTATTCATGGGATTTGGATTTGAGAAATGATCTGAGATTGGTGTGGAAAAAGCCTAACTGTAAGAAGTGCGAGTTAAATGGAGGAGTATGTGGGATTAAACCCAATTCAACAAATGAAATTCAATGCAAATACAATACTTCAACTCCAAGTGAAAAAAATAAATGTTAA

Coding sequence (CDS)

ATGATGCTTCATTATCATCTCCTCTTCCCCTGCTTTCTCTGCTTTCTCTGCTTCTTCAACCTCACAACAACCTCAGAACTCTGTTTCGACTCCACCTGCAATGGCAATTTTCAAACCATCCGATTCCCTTTCAGAATTCAAAACAAACAACCAAAATCATGTGGGTATCCCGGGTTTGACTTAACATGTCATCCCACAGGTCAACCATTAATCCATCTTCCACTTTCAGGGGAATTCATAGTTCAATACATAGATTATCAGAACCAAGAAATTTGGGTCAATGATCCAAACAACTGTCTTCCTCGAAAGATTCTGTCTCTTATGCTTTTTGGGTCGCCGTTTGATGCGAAAAACACTGTAGATTTCACCTTCTTTAATTGTTCGGGGAGTGATGAAATCCCATATGATTTCAATTTGAACCCAATTTCTTGCCTTAGTGGATTGTCGTATGCAGTTTTTGCTTCTTCTTCTTCAATGGTGAATGGGATTTTGTCGTCGAGGTGTGAGTTGGTGAAGACTGTATCGGTGCCGATGAGTTCGGAATCGTATTCATGGGATTTGGATTTGAGAAATGATCTGAGATTGGTGTGGAAAAAGCCTAACTGTAAGAAGTGCGAGTTAAATGGAGGAGTATGTGGGATTAAACCCAATTCAACAAATGAAATTCAATGCAAATACAATACTTCAACTCCAAGTGAAAAAAATAAATGTTAA

Protein sequence

MMLHYHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPSEKNKC
Homology
BLAST of MELO3C030056 vs. NCBI nr
Match: XP_008441618.1 (PREDICTED: RING-H2 finger protein ATL20-like [Cucumis melo])

HSP 1 Score: 494.6 bits (1272), Expect = 4.8e-136
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0

Query: 1   MMLHYHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFD 60
           MMLHYHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFD
Sbjct: 1   MMLHYHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFD 60

Query: 61  LTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTV 120
           LTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTV
Sbjct: 61  LTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTV 120

Query: 121 DFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSS 180
           DFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSS
Sbjct: 121 DFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSS 180

Query: 181 ESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPS 233
           ESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPS
Sbjct: 181 ESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPS 232

BLAST of MELO3C030056 vs. NCBI nr
Match: XP_011651602.1 (RING-H2 finger protein ATL20 [Cucumis sativus] >KGN58272.1 hypothetical protein Csa_017527 [Cucumis sativus])

HSP 1 Score: 446.8 bits (1148), Expect = 1.2e-121
Identity = 212/231 (91.77%), Postives = 218/231 (94.37%), Query Frame = 0

Query: 2   MLHYHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDL 61
           MLH  LL PCFLCFLCF NLTTTSELC DSTCNG+FQTIRFPFRIQN+QPKSCGYP FDL
Sbjct: 1   MLHNRLLVPCFLCFLCFLNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL 60

Query: 62  TCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 121
           TCHP+GQPLIHLP SGEFIVQYIDY+NQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD
Sbjct: 61  TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 120

Query: 122 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSE 181
           FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVN ILSSRCELVKTVSVPMS E
Sbjct: 121 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE 180

Query: 182 SYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPS 233
           +YSW  DLRNDLRL WKKPNCKKCELNGG+CGIKPNSTNEIQCKYNTST S
Sbjct: 181 TYSW--DLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQS 229

BLAST of MELO3C030056 vs. NCBI nr
Match: XP_038905493.1 (RING-H2 finger protein ATL20-like [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 1.9e-108
Identity = 193/231 (83.55%), Postives = 207/231 (89.61%), Query Frame = 0

Query: 1   MMLH-YHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGF 60
           M+LH   L F CFLCFLCFFNL TTSELCF STCNG+FQTIRFPFRI+N+QPKSCGYPGF
Sbjct: 1   MLLHLLFLCFLCFLCFLCFFNLATTSELCFGSTCNGDFQTIRFPFRIENQQPKSCGYPGF 60

Query: 61  DLTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNT 120
           DLTCH TGQPL+HLP SGEFIV+YIDYQNQEIWVNDPNNCLPRKILSLMLFGSPF+ KN+
Sbjct: 61  DLTCHSTGQPLLHLPFSGEFIVEYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFETKNS 120

Query: 121 VDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMS 180
            DFTFFNCSGSDEIPYDFNLNPISCLSGLSY VFAS+S +VN ILSSRC LVKTVSVP +
Sbjct: 121 EDFTFFNCSGSDEIPYDFNLNPISCLSGLSYTVFASASPIVNEILSSRCVLVKTVSVP-N 180

Query: 181 SESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTST 231
           S  + W  DLRNDLRLVWKKPNC+KCE NGGVCGIKPNSTNEI CKY+T T
Sbjct: 181 SGLFPW--DLRNDLRLVWKKPNCRKCESNGGVCGIKPNSTNEILCKYSTQT 228

BLAST of MELO3C030056 vs. NCBI nr
Match: XP_022984777.1 (RING-H2 finger protein ATL22-like [Cucurbita maxima])

HSP 1 Score: 335.1 bits (858), Expect = 4.9e-88
Identity = 159/221 (71.95%), Postives = 185/221 (83.71%), Query Frame = 0

Query: 7   LLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPT 66
           LL+ CFLCFLC F+  +TSELCF S+CNG+FQTI+FPFRI+N+QPKSCGYPGFDLTC  T
Sbjct: 5   LLWLCFLCFLCLFSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPST 64

Query: 67  GQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFN 126
           GQPL+HLP SG+F VQYIDY+NQEI VNDPN CLPRKILSL L GSPF A N+ DFT FN
Sbjct: 65  GQPLLHLPSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFQATNSEDFTLFN 124

Query: 127 CSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSESYSWD 186
           CS SD IP + NLNPI CLSGLSYAVFAS SS VN ILSSRC  +KTVSVP    S+S+ 
Sbjct: 125 CSWSDPIPSELNLNPIYCLSGLSYAVFASPSSFVNEILSSRCVAMKTVSVPY---SWSFS 184

Query: 187 LDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYN 228
            DL NDLRL WKKPNC++CE +GG+CG++PNST++IQCK++
Sbjct: 185 PDLTNDLRLGWKKPNCRRCESHGGICGLEPNSTDQIQCKHS 222

BLAST of MELO3C030056 vs. NCBI nr
Match: XP_022922932.1 (RING-H2 finger protein ATL22-like [Cucurbita moschata])

HSP 1 Score: 334.0 bits (855), Expect = 1.1e-87
Identity = 159/221 (71.95%), Postives = 182/221 (82.35%), Query Frame = 0

Query: 7   LLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPT 66
           LL  C LCFLC F+  +TSELCF S+CNG+FQTI+FPFRI+N+QPKSCGYPGFDLTC  T
Sbjct: 5   LLLLCLLCFLCLFSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPST 64

Query: 67  GQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFN 126
           GQPL+HLP SG+F VQYIDY+NQEI VNDPN CLPRKILSL L GSPF A N+ DFTFFN
Sbjct: 65  GQPLLHLPSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFN 124

Query: 127 CSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSESYSWD 186
           CS SD IP +FNLNPI CLSGLSYAVFAS SS VN ILSS C  +KTVSVP    S+S+ 
Sbjct: 125 CSWSDPIPSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPY---SWSFS 184

Query: 187 LDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYN 228
            DL NDLRL WKKPNC++CE  GG+CG+ PNST++IQCK++
Sbjct: 185 ADLTNDLRLGWKKPNCRRCESQGGICGLAPNSTDQIQCKHS 222

BLAST of MELO3C030056 vs. ExPASy Swiss-Prot
Match: P0CH01 (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29
Identity = 75/221 (33.94%), Postives = 121/221 (54.75%), Query Frame = 0

Query: 12  FLCFLCFFNLTTTS--ELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPTGQP 71
           FL     F L   S  + C  S+C  +   +RFPF + +KQP+ CG+ GF+L C  + + 
Sbjct: 8   FLYLFFLFPLLHASHPQQCSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQCTASPKT 67

Query: 72  LIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSG 131
            + LP SG F+V+ IDY +Q+I + DP NCL RK+L+  +  SPF A   V +TF +C  
Sbjct: 68  ALKLPNSGTFLVREIDYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSC-- 127

Query: 132 SDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMS------SESY 191
            +E+      + I CL   + +  A++S  +   +   C++VKT+ VP+S         +
Sbjct: 128 PNEVAKSSRFDSIPCLGNSTTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRF 187

Query: 192 SWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQC 225
           S D++   DL L W  P+C  CE +   CG + N++ +++C
Sbjct: 188 STDVN-DKDLWLKWDSPSCSDCERDFLRCGFRSNTSLQVKC 225

BLAST of MELO3C030056 vs. ExPASy Swiss-Prot
Match: Q9SKK8 (RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 76/218 (34.86%), Postives = 113/218 (51.83%), Query Frame = 0

Query: 13  LCFLCFFNLTTTSEL--CFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPTGQPL 72
           L FL FF L   SE   C+  +C+      RFPF + + QP+SCGY GF+L C       
Sbjct: 12  LIFLFFFPLLNASEQKPCYSFSCSQESVVARFPFSLFSYQPESCGYSGFNLICKDDANTT 71

Query: 73  IHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGS 132
           + LP S  F+V+ IDY+ Q I +NDP NCL R++L+    GSPF    + ++TF  C   
Sbjct: 72  LKLPKSEPFLVKEIDYETQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLICPKE 131

Query: 133 DEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMS-SESYSWDLDL 192
             I   F    I CL   + + F      + G + S C + K + +P S   +Y+   D 
Sbjct: 132 ANITASF--RAIDCLGNTTSSFFVVQFENL-GSMPSSCHIFKILPLPFSWFVAYTTYPDG 191

Query: 193 RN--DLRLVWKKPNCKKCE-LNGGVCGIKPNSTNEIQC 225
           +N  D+ L W  P+C+ CE      CG K N++++++C
Sbjct: 192 QNSRDMWLKWDSPDCRDCERRTNSRCGFKNNTSHQVEC 226

BLAST of MELO3C030056 vs. ExPASy Swiss-Prot
Match: P0CH02 (Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana OX=3702 GN=ATL21B PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.9e-27
Identity = 65/187 (34.76%), Postives = 100/187 (53.48%), Query Frame = 0

Query: 40  IRFPFRIQNKQPKSCGYPGFDLTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNC 99
           IRFPF         C +P F+L C      ++ LP+SG F VQYIDY+ Q+I++NDP NC
Sbjct: 46  IRFPF---------CDHPLFNLLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENC 105

Query: 100 LPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSM 159
           L +++L+  + GSPF  +    +TF  C     +P  +    I CLS  + + FA+S+  
Sbjct: 106 LAKRLLTFNISGSPFSPRFDTLYTFLTCPNELVLPSWY--PSIPCLSNSTSSFFATSNFA 165

Query: 160 VNGILSSRCELVKTVSVPMSS--ESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPN 219
           +   +   C++VK + VP  S      +   L   L L W  PNC+ CE++   CG K  
Sbjct: 166 LAESMLPSCQIVKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNK 221

Query: 220 STNEIQC 225
           ++ E++C
Sbjct: 226 ASPEVKC 221

BLAST of MELO3C030056 vs. ExPASy Swiss-Prot
Match: P0CH03 (Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana OX=3702 GN=ATL21C PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.5e-18
Identity = 66/207 (31.88%), Postives = 104/207 (50.24%), Query Frame = 0

Query: 9   FPCFLCFLCFFNLTTTSELCFDST-----CNGNFQTIRFPFRIQNKQPKSCGYPGFDLTC 68
           F  FL FL      +    C  S+     C      IRFPF         C +  F+L C
Sbjct: 10  FVFFLLFLVSLRHASNPNNCSSSSSRPLRCGPLEVPIRFPF---------CNHARFNLHC 69

Query: 69  HPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFT 128
               + ++ LP+SG F+V+ IDY+ Q+I++NDP NCL +++L+  + GSPF     + +T
Sbjct: 70  TDLNKTVLELPMSGTFLVRDIDYRRQKIYINDP-NCLAKRLLTFNISGSPFSPHFDILYT 129

Query: 129 FFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSS--- 188
           F +C     +P  +    I CLS  + + FA+S+  +   +   C++VK + VP +S   
Sbjct: 130 FLSCPNEVVLPSWY--PSIPCLSNSTSSFFATSNYSLAQSMLPSCQIVKRLHVPATSPFG 189

Query: 189 -ESYSWDLDLRNDLRLVWKKPNCK-KC 206
              +S DL+    L L W  P+C+ KC
Sbjct: 190 ETRFSSDLN-NQSLLLEWALPDCRAKC 203

BLAST of MELO3C030056 vs. ExPASy Swiss-Prot
Match: Q9C7E9 (RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17
Identity = 53/167 (31.74%), Postives = 86/167 (51.50%), Query Frame = 0

Query: 75  LSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIP 134
           +SG F+V  I+YQ Q+I ++DP NC+ +++L+    GSPF    +  +TF  C     IP
Sbjct: 1   MSGTFLVDEINYQKQQISISDPENCMVKRLLTFNTSGSPFSYGFSFYYTFLTCPNEVVIP 60

Query: 135 YDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVP--------MSSESYSWD 194
             ++L  I CLS  + + FA+S+   + +L   C++VK + VP        ++ E     
Sbjct: 61  V-WSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQIVKGLYVPVDVIYKDVITEEKGFST 120

Query: 195 LDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPSE 234
           +    ++ L W  PNC+ CE     CG K  ++ E+  KY    P E
Sbjct: 121 VPWLGNVLLEWSSPNCRGCEKESLRCGFKNKASLEV--KYLADPPDE 164

BLAST of MELO3C030056 vs. ExPASy TrEMBL
Match: A0A1S3B3U1 (RING-H2 finger protein ATL20-like OS=Cucumis melo OX=3656 GN=LOC103485700 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.3e-136
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0

Query: 1   MMLHYHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFD 60
           MMLHYHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFD
Sbjct: 1   MMLHYHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFD 60

Query: 61  LTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTV 120
           LTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTV
Sbjct: 61  LTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTV 120

Query: 121 DFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSS 180
           DFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSS
Sbjct: 121 DFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSS 180

Query: 181 ESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPS 233
           ESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPS
Sbjct: 181 ESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPS 232

BLAST of MELO3C030056 vs. ExPASy TrEMBL
Match: A0A0A0LC42 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G603590 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.6e-122
Identity = 212/231 (91.77%), Postives = 218/231 (94.37%), Query Frame = 0

Query: 2   MLHYHLLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDL 61
           MLH  LL PCFLCFLCF NLTTTSELC DSTCNG+FQTIRFPFRIQN+QPKSCGYP FDL
Sbjct: 1   MLHNRLLVPCFLCFLCFLNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL 60

Query: 62  TCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 121
           TCHP+GQPLIHLP SGEFIVQYIDY+NQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD
Sbjct: 61  TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 120

Query: 122 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSE 181
           FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVN ILSSRCELVKTVSVPMS E
Sbjct: 121 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE 180

Query: 182 SYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPS 233
           +YSW  DLRNDLRL WKKPNCKKCELNGG+CGIKPNSTNEIQCKYNTST S
Sbjct: 181 TYSW--DLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQS 229

BLAST of MELO3C030056 vs. ExPASy TrEMBL
Match: A0A6J1J338 (RING-H2 finger protein ATL22-like OS=Cucurbita maxima OX=3661 GN=LOC111482960 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.4e-88
Identity = 159/221 (71.95%), Postives = 185/221 (83.71%), Query Frame = 0

Query: 7   LLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPT 66
           LL+ CFLCFLC F+  +TSELCF S+CNG+FQTI+FPFRI+N+QPKSCGYPGFDLTC  T
Sbjct: 5   LLWLCFLCFLCLFSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPST 64

Query: 67  GQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFN 126
           GQPL+HLP SG+F VQYIDY+NQEI VNDPN CLPRKILSL L GSPF A N+ DFT FN
Sbjct: 65  GQPLLHLPSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFQATNSEDFTLFN 124

Query: 127 CSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSESYSWD 186
           CS SD IP + NLNPI CLSGLSYAVFAS SS VN ILSSRC  +KTVSVP    S+S+ 
Sbjct: 125 CSWSDPIPSELNLNPIYCLSGLSYAVFASPSSFVNEILSSRCVAMKTVSVPY---SWSFS 184

Query: 187 LDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYN 228
            DL NDLRL WKKPNC++CE +GG+CG++PNST++IQCK++
Sbjct: 185 PDLTNDLRLGWKKPNCRRCESHGGICGLEPNSTDQIQCKHS 222

BLAST of MELO3C030056 vs. ExPASy TrEMBL
Match: A0A6J1E4R1 (RING-H2 finger protein ATL22-like OS=Cucurbita moschata OX=3662 GN=LOC111430762 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 5.3e-88
Identity = 159/221 (71.95%), Postives = 182/221 (82.35%), Query Frame = 0

Query: 7   LLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPT 66
           LL  C LCFLC F+  +TSELCF S+CNG+FQTI+FPFRI+N+QPKSCGYPGFDLTC  T
Sbjct: 5   LLLLCLLCFLCLFSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPST 64

Query: 67  GQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFN 126
           GQPL+HLP SG+F VQYIDY+NQEI VNDPN CLPRKILSL L GSPF A N+ DFTFFN
Sbjct: 65  GQPLLHLPSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFN 124

Query: 127 CSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSESYSWD 186
           CS SD IP +FNLNPI CLSGLSYAVFAS SS VN ILSS C  +KTVSVP    S+S+ 
Sbjct: 125 CSWSDPIPSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPY---SWSFS 184

Query: 187 LDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYN 228
            DL NDLRL WKKPNC++CE  GG+CG+ PNST++IQCK++
Sbjct: 185 ADLTNDLRLGWKKPNCRRCESQGGICGLAPNSTDQIQCKHS 222

BLAST of MELO3C030056 vs. ExPASy TrEMBL
Match: A0A6J1CJP7 (putative RING-H2 finger protein ATL21A OS=Momordica charantia OX=3673 GN=LOC111011626 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 7.4e-74
Identity = 139/218 (63.76%), Postives = 161/218 (73.85%), Query Frame = 0

Query: 7   LLFPCFLCFLCFFNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPT 66
           +L  C L    F    ++S LCFD+ C G+ QTIRFPFRI+N+QP SCGYPGFDL+CH T
Sbjct: 1   MLILCLLLLCFFIPAISSSGLCFDTRCQGDDQTIRFPFRIENRQPSSCGYPGFDLSCHAT 60

Query: 67  GQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFN 126
            QP +HLP SG F VQ+IDYQNQEIWVNDPN CLP KILSL L GSPF  K T DFTFFN
Sbjct: 61  AQPRLHLPPSGNFSVQFIDYQNQEIWVNDPNGCLPGKILSLNLSGSPFAGKYTQDFTFFN 120

Query: 127 CSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSESYSWD 186
           CS    +PY  NLNPISCLSGLSYAVFASSS M+   LSS C ++K+VSVP+   S+S+ 
Sbjct: 121 CSAKVRLPYGLNLNPISCLSGLSYAVFASSSPMIINDLSSNCVVMKSVSVPV---SWSFS 180

Query: 187 LDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQC 225
            DLR+DL+L WKKP C  CE  GG C   PNS+N+IQC
Sbjct: 181 SDLRDDLQLAWKKPACGSCESRGGRCEPNPNSSNQIQC 215

BLAST of MELO3C030056 vs. TAIR 10
Match: AT5G53110.1 (RING/U-box superfamily protein )

HSP 1 Score: 185.3 bits (469), Expect = 5.8e-47
Identity = 105/223 (47.09%), Postives = 136/223 (60.99%), Query Frame = 0

Query: 12  FLCFLCFFNLTTTSEL-CFDSTCNGNFQTIRFPFRIQNKQPKSCGY-PGFDLTC--HPTG 71
           FL  L     TTTS + C ++ C  +   IRFPFR++++Q  SCGY  GFDLTC  +   
Sbjct: 13  FLSLLIPTTTTTTSTVTCTNAVCRRDGPIIRFPFRLKHQQSHSCGYDKGFDLTCDINAGN 72

Query: 72  QPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNC 131
           +  I LP SG F V+ IDY  QEIW+NDPNNCLP++IL L L  +PF       FTFFNC
Sbjct: 73  RTTITLPFSGNFTVEEIDYAAQEIWINDPNNCLPQRILQLNLNSTPFSGVYMRQFTFFNC 132

Query: 132 SGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSR-CELVKTVSVPMSSESYSW- 191
             S+ + +   LNPI+CLSG +  VFA+ S  V   LSS+ C L+KTV VP+    Y   
Sbjct: 133 PTSEYLRFR-PLNPITCLSGKNSTVFATPSPRVINYLSSQSCRLMKTVYVPVRWPFYEQI 192

Query: 192 --DLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKY 227
               DL ++L L W+ P C +CE+ GG CGIK NS+ EI C +
Sbjct: 193 VSSSDLSDNLWLTWRVPRCSRCEIKGGKCGIKSNSSREIICSH 234

BLAST of MELO3C030056 vs. TAIR 10
Match: AT2G46495.1 (RING/U-box superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30
Identity = 75/221 (33.94%), Postives = 121/221 (54.75%), Query Frame = 0

Query: 12  FLCFLCFFNLTTTS--ELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPTGQP 71
           FL     F L   S  + C  S+C  +   +RFPF + +KQP+ CG+ GF+L C  + + 
Sbjct: 8   FLYLFFLFPLLHASHPQQCSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQCTASPKT 67

Query: 72  LIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSG 131
            + LP SG F+V+ IDY +Q+I + DP NCL RK+L+  +  SPF A   V +TF +C  
Sbjct: 68  ALKLPNSGTFLVREIDYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSC-- 127

Query: 132 SDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMS------SESY 191
            +E+      + I CL   + +  A++S  +   +   C++VKT+ VP+S         +
Sbjct: 128 PNEVAKSSRFDSIPCLGNSTTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRF 187

Query: 192 SWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQC 225
           S D++   DL L W  P+C  CE +   CG + N++ +++C
Sbjct: 188 STDVN-DKDLWLKWDSPSCSDCERDFLRCGFRSNTSLQVKC 225

BLAST of MELO3C030056 vs. TAIR 10
Match: AT2G25410.1 (RING/U-box superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 8.4e-30
Identity = 76/218 (34.86%), Postives = 113/218 (51.83%), Query Frame = 0

Query: 13  LCFLCFFNLTTTSEL--CFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPTGQPL 72
           L FL FF L   SE   C+  +C+      RFPF + + QP+SCGY GF+L C       
Sbjct: 12  LIFLFFFPLLNASEQKPCYSFSCSQESVVARFPFSLFSYQPESCGYSGFNLICKDDANTT 71

Query: 73  IHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGS 132
           + LP S  F+V+ IDY+ Q I +NDP NCL R++L+    GSPF    + ++TF  C   
Sbjct: 72  LKLPKSEPFLVKEIDYETQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLICPKE 131

Query: 133 DEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMS-SESYSWDLDL 192
             I   F    I CL   + + F      + G + S C + K + +P S   +Y+   D 
Sbjct: 132 ANITASF--RAIDCLGNTTSSFFVVQFENL-GSMPSSCHIFKILPLPFSWFVAYTTYPDG 191

Query: 193 RN--DLRLVWKKPNCKKCE-LNGGVCGIKPNSTNEIQC 225
           +N  D+ L W  P+C+ CE      CG K N++++++C
Sbjct: 192 QNSRDMWLKWDSPDCRDCERRTNSRCGFKNNTSHQVEC 226

BLAST of MELO3C030056 vs. TAIR 10
Match: AT2G46494.1 (RING/U-box superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-28
Identity = 65/187 (34.76%), Postives = 100/187 (53.48%), Query Frame = 0

Query: 40  IRFPFRIQNKQPKSCGYPGFDLTCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNC 99
           IRFPF         C +P F+L C      ++ LP+SG F VQYIDY+ Q+I++NDP NC
Sbjct: 46  IRFPF---------CDHPLFNLLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENC 105

Query: 100 LPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSM 159
           L +++L+  + GSPF  +    +TF  C     +P  +    I CLS  + + FA+S+  
Sbjct: 106 LAKRLLTFNISGSPFSPRFDTLYTFLTCPNELVLPSWY--PSIPCLSNSTSSFFATSNFA 165

Query: 160 VNGILSSRCELVKTVSVPMSS--ESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPN 219
           +   +   C++VK + VP  S      +   L   L L W  PNC+ CE++   CG K  
Sbjct: 166 LAESMLPSCQIVKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNK 221

Query: 220 STNEIQC 225
           ++ E++C
Sbjct: 226 ASPEVKC 221

BLAST of MELO3C030056 vs. TAIR 10
Match: AT5G36001.1 (RING/U-box superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-26
Identity = 75/220 (34.09%), Postives = 116/220 (52.73%), Query Frame = 0

Query: 9   FPCFLCFLCFFNL----TTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCH 68
           FP  L F  FF       +  + C+ S+C GN   + FPF +  +Q  SC YPGF+L C 
Sbjct: 7   FPLLLYFFFFFYFPLLNASKPKRCYSSSCGGNNLDVSFPFWLSPEQSSSCDYPGFNLHC- 66

Query: 69  PTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTF 128
              +  + LP S  F+VQ  D ++Q I + DP+NCL R++LS     SPF   + V++TF
Sbjct: 67  ---ETALKLPNSRRFLVQ--DIKSQRIHLRDPDNCLARRLLSFDASMSPFSPLHLVNYTF 126

Query: 129 FNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSESYS 188
            +C   +E     +L PI CL+        S+ S + G + S C+ +KT+ +P+SS   +
Sbjct: 127 LSC--HNENVKSSSLEPIHCLTN-------STPSDLTGSMPSSCQTLKTLLLPVSS-PLA 186

Query: 189 WDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQC 225
            DL+ + DL L W  P+C  C     +C    N+  +++C
Sbjct: 187 GDLN-KQDLWLKWDSPDCTGCVDFSPLCSFINNTILKVKC 209

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008441618.14.8e-136100.00PREDICTED: RING-H2 finger protein ATL20-like [Cucumis melo][more]
XP_011651602.11.2e-12191.77RING-H2 finger protein ATL20 [Cucumis sativus] >KGN58272.1 hypothetical protein ... [more]
XP_038905493.11.9e-10883.55RING-H2 finger protein ATL20-like [Benincasa hispida][more]
XP_022984777.14.9e-8871.95RING-H2 finger protein ATL22-like [Cucurbita maxima][more]
XP_022922932.11.1e-8771.95RING-H2 finger protein ATL22-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
P0CH011.4e-2933.94Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A... [more]
Q9SKK81.2e-2834.86RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2[more]
P0CH022.9e-2734.76Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana OX=3702 GN=ATL21B... [more]
P0CH031.5e-1831.88Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana OX=3702 GN=ATL21C... [more]
Q9C7E92.7e-1731.74RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A1S3B3U12.3e-136100.00RING-H2 finger protein ATL20-like OS=Cucumis melo OX=3656 GN=LOC103485700 PE=4 S... [more]
A0A0A0LC425.6e-12291.77RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G603590 P... [more]
A0A6J1J3382.4e-8871.95RING-H2 finger protein ATL22-like OS=Cucurbita maxima OX=3661 GN=LOC111482960 PE... [more]
A0A6J1E4R15.3e-8871.95RING-H2 finger protein ATL22-like OS=Cucurbita moschata OX=3662 GN=LOC111430762 ... [more]
A0A6J1CJP77.4e-7463.76putative RING-H2 finger protein ATL21A OS=Momordica charantia OX=3673 GN=LOC1110... [more]
Match NameE-valueIdentityDescription
AT5G53110.15.8e-4747.09RING/U-box superfamily protein [more]
AT2G46495.11.0e-3033.94RING/U-box superfamily protein [more]
AT2G25410.18.4e-3034.86RING/U-box superfamily protein [more]
AT2G46494.12.1e-2834.76RING/U-box superfamily protein [more]
AT5G36001.11.1e-2634.09RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032872Wall-associated receptor kinase, C-terminalPFAMPF14380WAK_assoccoord: 168..227
e-value: 1.2E-6
score: 29.1
IPR025287Wall-associated receptor kinase, galacturonan-binding domainPFAMPF13947GUB_WAK_bindcoord: 28..95
e-value: 1.2E-18
score: 67.3
NoneNo IPR availablePANTHERPTHR46279RING/U-BOX SUPERFAMILY PROTEINcoord: 9..230
NoneNo IPR availablePANTHERPTHR46279:SF10RING/U-BOX SUPERFAMILY PROTEINcoord: 9..230

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030056.1MELO3C030056.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030247 polysaccharide binding