MELO3C029959 (gene) Melon (DHL92) v4

Overview
NameMELO3C029959
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionMethyltransferase type 11
Locationchr03: 13728581 .. 13728985 (-)
RNA-Seq ExpressionMELO3C029959
SyntenyMELO3C029959
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACGCCACAATCGTCGTTTTTCAATAAGCTTTCATTTGCTTCTATTGCCATTGCCACTCTCATCCTCATCTTCCTCTTCCTCCAAACTCCACAAACCTTCATTCCCCCAAATTCTCCTTCAAAACCCCATCTCAAATTCCCTAAATCCTCCTGCGATTCCGCTCCTCACGAGCTCATCTCCATTGACAAGAAGAACAAGCGTCTTTTGGTCATCCAATGACTGGAAGAAGAAGCTCTCCTCCTTCATTAATTTCTTCCAATCCATTTGAGATCTAGGCCTTCTCCATAACCACACCAAAGTTATCTGCGTTTCCACTGGTACTGGCCATGCGGTCATGGCGTTGTCTCATATGGGAGTTCACGATGTCACCGGTGTCGAGTTGATTGATTCGCCTCCTTTG

mRNA sequence

ATGGAACGCCACAATCGTCGTTTTTCAATAAGCTTTCATTTGCTTCTATTGCCATTGCCACTCTCATCCTCATCTTCCTCTTCCTCCAAACTCCACAAACCTTCATTCCCCCAAATTCTCCTTCAAAACCCCATCTCAAATTCCCTAAATCCTCCTGCGATTCCGCTCCTCACGAGCTCATCTCCATTGACAAGAAGAACAAGCGTCTTTTGGTCATCCAATGACTGGAAGAAGAAGCTCTCCTCCTTCATTAATTTCTTCCAATCCATTTGAGATCTAGGCCTTCTCCATAACCACACCAAAGTTATCTGCGTTTCCACTGGTACTGGCCATGCGGTCATGGCGTTGTCTCATATGGGAGTTCACGATGTCACCGGTGTCGAGTTGATTGATTCGCCTCCTTTG

Coding sequence (CDS)

ATGGAACGCCACAATCGTCGTTTTTCAATAAGCTTTCATTTGCTTCTATTGCCATTGCCACTCTCATCCTCATCTTCCTCTTCCTCCAAACTCCACAAACCTTCATTCCCCCAAATTCTCCTTCAAAACCCCATCTCAAATTCCCTAAATCCTCCTGCGATTCCGCTCCTCACGAGCTCATCTCCATTGACAAGAAGAACAAGCGTCTTTTGGTCATCCAATGACTGGAAGAAGAAGCTCTCCTCCTTCATTAATTTCTTCCAATCCATTTGA

Protein sequence

MERHNRRFSISFHLLLLPLPLSSSSSSSSKLHKPSFPQILLQNPISNSLNPPAIPLLTSSSPLTRRTSVFWSSNDWKKKLSSFINFFQSI
Homology
[Close]
BLAST of MELO3C029959 vs. NCBI nr
Match: KAA0038914.1 (Methyltransferase type 11 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-04
Identity = 36/70 (51.43%), Postives = 40/70 (57.14%), Query Frame = 0 

Query: 1  MERHNRRFSISFHLLLLPLPLSSSSSSSSKLHKPSFPQILLQNPISNSLNPPAIPLLTSS 60
          MERH RRF        + +          +  +   PQILLQNPISNS N   IPLL SS
Sbjct: 1  MERHIRRFLNKLSFASIAIATLILIFLFLQTPQTCIPQILLQNPISNSPNSSTIPLLASS 60

Query: 61 SPLTRRTSVF 71
          SPLTRRTSVF
Sbjct: 61 SPLTRRTSVF 70

[Close]
BLAST of MELO3C029959 vs. ExPASy TrEMBL
Match: A0A5A7T5Z3 (Methyltransferase type 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1170G00830 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-04
Identity = 36/70 (51.43%), Postives = 40/70 (57.14%), Query Frame = 0 

Query: 1  MERHNRRFSISFHLLLLPLPLSSSSSSSSKLHKPSFPQILLQNPISNSLNPPAIPLLTSS 60
          MERH RRF        + +          +  +   PQILLQNPISNS N   IPLL SS
Sbjct: 1  MERHIRRFLNKLSFASIAIATLILIFLFLQTPQTCIPQILLQNPISNSPNSSTIPLLASS 60

Query: 61 SPLTRRTSVF 71
          SPLTRRTSVF
Sbjct: 61 SPLTRRTSVF 70

The following BLAST results are available for this feature:
BLAST of MELO3C029959 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0038914.13.7e-0451.43Methyltransferase type 11 [Cucumis melo var. makuwa][more]
BLAST of MELO3C029959 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029959 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T5Z31.8e-0451.43Methyltransferase type 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
BLAST of MELO3C029959 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029959.1MELO3C029959.1mRNA