MELO3C029893 (gene) Melon (DHL92) v4

Overview
NameMELO3C029893
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionEnvelope-like protein
Locationchr10: 18510605 .. 18510766 (+)
RNA-Seq ExpressionMELO3C029893
SyntenyMELO3C029893
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGAAAGAGGGAGAACACACAACCAAAGAGAGAGATTTGAGGGGATTTGATAAGGGAGAACATAGAACGAAGGGGAAAAGGGTTTCGCACGAACACGGGTTGAGGGGAAAGGCTAAACACGGGTTGAAGACGATAAGGTAGGGGAGGGTTTCAGTCGTTTGA

mRNA sequence

CCGAAAGAGGGAGAACACACAACCAAAGAGAGAGATTTGAGGGGATTTGATAAGGGAGAACATAGAACGAAGGGGAAAAGGGTTTCGCACGAACACGGGTTGAGGGGAAAGGCTAAACACGGGTTGAAGACGATAAGGTAGGGGAGGGTTTCAGTCGTTTGA

Coding sequence (CDS)

CCGAAAGAGGGAGAACACACAACCAAAGAGAGAGATTTGAGGGGATTTGATAAGGGAGAACATAGAACGAAGGGGAAAAGGGTTTCGCACGAACACGGGTTGAGGGGAAAGGCTAAACACGGGTTGAAGACGATAAGGTAG

Protein sequence

PKEGEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKHGLKTIR
Homology
BLAST of MELO3C029893 vs. NCBI nr
Match: KAA0041548.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK19706.1 envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 7.9e-11
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0

Query: 1  PKEGEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKH 41
          PKEGEHTTKE DLRGFDKGEHRTKGKRVSH+HG RGK KH
Sbjct: 21 PKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKH 60

BLAST of MELO3C029893 vs. NCBI nr
Match: TYK04868.1 (hypothetical protein E5676_scaffold143G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.5e-09
Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 0

Query: 1  PKEGEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKHGLKTIR 47
          P  G  + KE DLRGFD GEHRTKGKRVSHEHGLRGK +HGLKT R
Sbjct: 8  PNNGTSSNKEGDLRGFDDGEHRTKGKRVSHEHGLRGKPEHGLKTTR 53

BLAST of MELO3C029893 vs. NCBI nr
Match: KAA0062169.1 (hypothetical protein E6C27_scaffold89G005470 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 4.4e-09
Identity = 34/44 (77.27%), Postives = 36/44 (81.82%), Query Frame = 0

Query: 1  PKEGEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKHGLKT 45
          P  G  + KE DLRGFD GEHRTKGKRVSHEHGLRGK +HGLKT
Sbjct: 8  PNNGTSSNKEGDLRGFDDGEHRTKGKRVSHEHGLRGKPEHGLKT 51

BLAST of MELO3C029893 vs. NCBI nr
Match: KAA0061239.1 (hypothetical protein E6C27_scaffold455G00740 [Cucumis melo var. makuwa] >TYJ99958.1 hypothetical protein E5676_scaffold5168G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-08
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 4  GEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKHGLKTIR 47
          G  + KE DLRGFD+GEHR KGK VSHEHGLRGK +HGLKTIR
Sbjct: 11 GTSSDKEGDLRGFDEGEHRMKGKSVSHEHGLRGKPEHGLKTIR 53

BLAST of MELO3C029893 vs. NCBI nr
Match: TYK01078.1 (hypothetical protein E5676_scaffold264G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 8.2e-08
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 4  GEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKHGLKTIR 47
          G  + KE DLR FD+GEHRTKGKRVSHEHGLRGK +H LKTIR
Sbjct: 11 GTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIR 53

BLAST of MELO3C029893 vs. ExPASy TrEMBL
Match: A0A5A7TF63 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001080 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.8e-11
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0

Query: 1  PKEGEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKH 41
          PKEGEHTTKE DLRGFDKGEHRTKGKRVSH+HG RGK KH
Sbjct: 21 PKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKH 60

BLAST of MELO3C029893 vs. ExPASy TrEMBL
Match: A0A5D3C0R8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00590 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.2e-10
Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 0

Query: 1  PKEGEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKHGLKTIR 47
          P  G  + KE DLRGFD GEHRTKGKRVSHEHGLRGK +HGLKT R
Sbjct: 8  PNNGTSSNKEGDLRGFDDGEHRTKGKRVSHEHGLRGKPEHGLKTTR 53

BLAST of MELO3C029893 vs. ExPASy TrEMBL
Match: A0A5A7V909 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005470 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-09
Identity = 34/44 (77.27%), Postives = 36/44 (81.82%), Query Frame = 0

Query: 1  PKEGEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKHGLKT 45
          P  G  + KE DLRGFD GEHRTKGKRVSHEHGLRGK +HGLKT
Sbjct: 8  PNNGTSSNKEGDLRGFDDGEHRTKGKRVSHEHGLRGKPEHGLKT 51

BLAST of MELO3C029893 vs. ExPASy TrEMBL
Match: A0A5A7V6A8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5168G00010 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.8e-08
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 4  GEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKHGLKTIR 47
          G  + KE DLRGFD+GEHR KGK VSHEHGLRGK +HGLKTIR
Sbjct: 11 GTSSDKEGDLRGFDEGEHRMKGKSVSHEHGLRGKPEHGLKTIR 53

BLAST of MELO3C029893 vs. ExPASy TrEMBL
Match: A0A5A7U0L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00090 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.0e-08
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 4  GEHTTKERDLRGFDKGEHRTKGKRVSHEHGLRGKAKHGLKTIR 47
          G  + KE DLR FD+GEHRTKGKRVSHEHGLRGK +H LKTIR
Sbjct: 11 GTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIR 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0041548.17.9e-1190.00envelope-like protein [Cucumis melo var. makuwa] >TYK19706.1 envelope-like prote... [more]
TYK04868.11.5e-0976.09hypothetical protein E5676_scaffold143G00590 [Cucumis melo var. makuwa][more]
KAA0062169.14.4e-0977.27hypothetical protein E6C27_scaffold89G005470 [Cucumis melo var. makuwa][more]
KAA0061239.13.7e-0876.74hypothetical protein E6C27_scaffold455G00740 [Cucumis melo var. makuwa] >TYJ9995... [more]
TYK01078.18.2e-0876.74hypothetical protein E5676_scaffold264G00950 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TF633.8e-1190.00Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24... [more]
A0A5D3C0R87.2e-1076.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V9092.1e-0977.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V6A81.8e-0876.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U0L74.0e-0876.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029893.1MELO3C029893.1mRNA