MELO3C029832 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAATGTTGATTGTTATCAGAATGCAAAAAATAGCTCAGGAACAAAATGAGAAGATTGAAAAAGTGAACCGTGAAAGAAAATTCCATCAAGTAAATAGCATCCTCGTAATTCATACTACAATAATAGAGTAGAGGTTAATTAGCATTTTGTATTTAATCTAGTATTACAGGTAGAAGCTGAGCACAAGGAGGAGGAAGAATCTGAACAAGAATCTGGGGATGAATTTGATTATCAGGGAGATAAACCTAAAATTTGTATTTAGTGA ACAATGTTGATTGTTATCAGAATGCAAAAAATAGCTCAGGAACAAAATGAGAAGATTGAAAAAGTGAACCGTGAAAGAAAATTCCATCAAGTAAATAGCATCCTCGTAATTCATACTACAATAATAGAGTAGAGGTTAATTAGCATTTTGTATTTAATCTAGTATTACAGGTAGAAGCTGAGCACAAGGAGGAGGAAGAATCTGAACAAGAATCTGGGGATGAATTTGATTATCAGGGAGATAAACCTAAAATTTGTATTTAGTGA ATGTTGATTGTTATCAGAATGCAAAAAATAGCTCAGGAACAAAATGAGAAGATTGAAAAAGTGAACCGTGAAAGAAAATTCCATCAAGTAAATAGCATCCTCGTAATTCATACTACAATAATAGAGTAG MLIVIRMQKIAQEQNEKIEKVNRERKFHQVNSILVIHTTIIE Homology
BLAST of MELO3C029832 vs. NCBI nr
Match: TYJ99022.1 (pre-mRNA-splicing factor SPF27-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 3.5e-05 Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
BLAST of MELO3C029832 vs. ExPASy Swiss-Prot
Match: Q949S9 (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 PE=1 SV=1) HSP 1 Score: 43.9 bits (102), Expect = 5.2e-04 Identity = 20/28 (71.43%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of MELO3C029832 vs. ExPASy TrEMBL
Match: A0A5D3BGY3 (Pre-mRNA-splicing factor SPF27-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002260 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-05 Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
BLAST of MELO3C029832 vs. ExPASy TrEMBL
Match: A0A6J1KLZ4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495390 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 9.2e-04 Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of MELO3C029832 vs. ExPASy TrEMBL
Match: A0A6J1EDE4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431514 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 9.2e-04 Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of MELO3C029832 vs. ExPASy TrEMBL
Match: A0A0A0LQG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 9.2e-04 Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of MELO3C029832 vs. ExPASy TrEMBL
Match: A0A6J1CB04 (pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC111009059 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 9.2e-04 Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of MELO3C029832 vs. TAIR 10
Match: AT3G18165.1 (modifier of snc1,4 ) HSP 1 Score: 43.9 bits (102), Expect = 3.7e-05 Identity = 20/28 (71.43%), Postives = 26/28 (92.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|