MELO3C029825.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C029825.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	light-harvesting complex-like protein OHP2, chloroplastic
Location	chr03: 3990982 .. 3996772 (+)
RNA-Seq Expression	MELO3C029825.jh1
Synteny	MELO3C029825.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATGTCAGGGGCTTGTTCAATCCCCTTCGCCAACATCAAAATCCCCTCCACTTCTTCCTCACCGGCCGCCACCGCCTCTGCCGCTTCTCCCTCCGCCTCCGCCTCCTCTTCCGCTTCTTCTTCATCCTCCCTTCACTCTTCCCTCCGATTCCCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCGCCGCCCTCTCCCCCTTCGCCCACGCCTCCTCTCAAGCCTTCTCCTTCCTCGCAATCGCCTCCCTCACCGGTTTTGAAACAGGATAATGTGATCACATTGGAGTTTCAGAGGCTGAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTCGATTTCATTCCCCCCCTCCTTTTTCTTTACTTTGATTCTCTTGTGGATGCTAAAATTTGAATGGGATTTGTTCTTGTTTGTTCTTGCTGGCTGTTATGATATGTCTGAAGCAATTAAATTAATAATATAGGCCTTGCTTCCAATTCACTGTCATTGGACTAATTCTCTTGTTGTATTTGGATTTAGATTGGCACTTTCTCTTTAAATTTAATATTATATGGTTTATTGTATTGATTGTTTTCGGCCATAAAGAGAATGGATTTCTCGATTGATTTCTGAAGCAAGATAGTTGCCAAGAATTCAAACCTTTTTCTAAGAAGGCTAAATCATAGTAAGGAAGTCAAAGTAAGTTTGGGTCGTGCTGATATGACCTCCATCTCTATTTTTTGGAGGTTCAGTCCCCTGCTTTGCGGTTTTTGCACTAAAAAAAGAAATAAATTTGGAGAAAAGAAGCATAAATTTAAAAAAAGAGAATACTCAAAATGAAATGGTTATTAAATTGTATTGTTTTTCATGCTGCTTGTTTAAACTGACCATCAGGACAAAGGCTTTTCTTGATTTGTAGAAGTGAGCTACACTGTGGTGTCAACTTCCAAAAGGCTTCAAAAACTTATTTGACGGGTCCCCAGTTAATTTTGCTTGTAGTTGCAAGTTTTGATTATGTTCAAGTGCCAAAACTCCATTTCTTTCTTTTATCTTTATGGATAACCAATTCATTTCAAATAGAGTCGTTTGCAACACTTTCTCTGTTTGAGCATTCATAGTTTGCATCTGATTTGAGTTAAAAATAGTCCCTTTGTGTACCTTTGTTTCGTTCCATAATTTTTCTGGGCGTCATGGTTGTTAGTAGGGGTTTACATGGGATGAGGTTGGGTTGTCTGGCTGTGGAAAAATGAGAAAAGAAAGTATAATATAACATTTGACCCAATTTACCTTTACTAAATTAATAATAATAATAATAATATATATATATATATATATATATCATTAATCCGGGTTGGGTTGGATTAAACCGAAACCCAACCCAAAAAGAAAACCAAATTTTTTAATCCAACCCAACCCAAATTTTAAACTAATTCAACCAACCTTTATAAAATGGATTGGGTAGTTCAATTGTCGGGTTATTCGGATTATCTTTTACACCATTAATATGAACCAAGACGACCTTGTGTTGTCTTCGGGACCACTCACACATTCCAAAGCGAAGAAACTACGGTTAGCATTGAATTCTTACATTCAAGAGGAAGTGTACTCAATCGAGGAGATTTGAGCAACAACAATTCATTAGAAGATTTTTAATTGGAGTCAACAGTTGACGCTAGAGTATGGAACCAATTGGCCTTTGACATCTCTTGACTTCAAGGCTACTTTACAAGTCTTTGATTTGGATTTGAGGACGAATCCTTCAAAAGGAGAGGATGATATGAACCGACTAAACATCAAATTATTGGTGAACCTCTAATATCAAATTCTAATTATTGAAAGCAATTAACACCAACATGAGGCTTCCGTGGAAACCTGAGAACCGAGAGGAAAACCATGATATTTTAGTTTTATTATTTTTATGATGAATGAATACAATAGGTACAAAGGGAGAGAATAAATAAAATACAATAGGAGTAAGAAAGGAAAAGATTTAGGAAATAAAATCTTCCATATTATTTTTTCCAAAAAGGCCAAAGCCCTACTAATTTTAACACTCCCCCTCAAGTTCAAGTTGGGACGTAAATTTCAATGAGGTTCAACTTGCAAACACAAAAGTCCTTTGGTCTGAAAAGCCCATTGGTGAGAACATTAGCAACCTATTGGCTCGAAGGAATGTACGGAATGCATATGCTTCCACTGTCAAGTCTTTCTTTGATGAAATGTCGATCAATCTCAACATGTTTAGTTCTATCATGTTGAACTGGGTTGTTAGCAATACTAATAGCGGCTTTAAAAGCTTCAATGGTGTCTACATTCCTAATGAAGATCTAACAGAATTTTCTGGAGCCTAATTTCCTCACATATTCCCAAACTCATAGCTTTGTATTCGGCCTCAGCGTTGGTCCTGGCCACAACACTTTGCTTCTTACTTCTCCAAATTACAAGATTGCCTCAAACAAAGGTACAATAACCAGAGGTAGACTTTTTGTCAACAATATATTTTGTCCAATCCGAGTCAGTATATGCCTCAACGGTCTTTCTATCTGTTTATCTAAACATCTACCCTTTACTAGGTGTATTTTTCAAGTATCTTAGAATTCTGTTGACAACTTCCATGTGTTTCTCATAGAGAGCCTGCATAAACTGGTTGACAACACTCACAGCAAAAGAAATATCAAGACGAGTATGGAATAAGTAGATTAATTTACCTACAGGGCGCTGATATTATTCTTTATCGACTGAAACTTGATCATCAGAGTTTCCTAGTCTACCGTTGAATTCATTAGGAGGATATTTTCTCTGGGACACGGAGATACCAATCAGCAGGACGACATCCCAACATACTTGTCTTGATTTGCAAATCAAGAGTGTATTTTCTCTGAAACACGGAGATACCTTCGATCTGGCTACCTCTATTCCAAGGAAATATTTCAGATTTTCCAAATCCTTAATCTCAAATTCATCACCCATTCTCTGCTTTAGTTGATTGATTTCTGTTTAATCATCTACAGTCAAAATAATGTCATCCACATAAACTATTAGAATAACAATCTTCCTTGTCTTGGAAACCTTTGTAAATAGGTAGTCATGTCTAGGGTTCCTTGTTTGCTGTCATGAACCTGTTTTCTCAGTGTATAAAACGGAGAGGCATTCTATCGTTTCGAGTAAATGGTTTGAGTTGTATCCCACAAATCTTTTGCTGTGGCTGCATATAGTAGAGGCTGATCGATCTGAGGTTCCATACTATTAATCAGCATGGATCAAATGGGTGAGTCCTCCCCTTTCCAGAGTTGTTCCAAGGCATCACCCAGTGGAGGACGTACAGTCTCTCCAATTAAGAAGTCGAACTGGTGGCGACCTTCGAGGAACATCTTTGCTGATTGCGACCAAGAGAAATAATTTTGCCCATTTAATTTTTCAACTGAAAAGTTCCCTAGATGAACCCAAGAAGCCAGTTATATAATTTGACGGTAAATTAAGGAACGAAGTTACCGGGTTCTTGGAATACATCGGTAACTTGATTGGTTTGGAATGCGCCGAAGACTTGTCCACTTCAATGTCCGATCTATTCTGGGGTTGGTTAGTCCTGTTACCAGAAAACAACGGTTGCTATAAATTGTCAACATACAGTAGATTCTTACTTTACAGATTCGACAGATTTACAATAGGAGGTTATTGTTTAGAAGGCATAGGCGGCGCGTGGGGCTGCGGTTGGTCGGAAGGGTATGATGGTTGGACGTCCAACGGCGCATAGGCCTCCACGTAGAGTGGAATGAGCTGGGCGGTGAGATGAAAAGGCGTCGACGCATAGGCCCACGCGTCAGACAGGAGCAGCATGTGAGAAGTTTTCTGGTCAGGCGGCGCGTATGGCTACGAGACTACTCCCGTTGGTTAGATTGGTGGTCTCTGAAGGTTTTGGAGCAATTTTTCCATGGCGGCGGCGATGACGGGTTCAGTTTCGATTTGGGTTTCTCCTAGGTTATTTTCTAGGATTTCGTTATTGCTTCGCTCTTTACCATATTGAAAGCAATTAACACCAACACGAGGCTTACGTGGAAACCCGAGAACTAAGAGAAAAAACCACAATATTTTAGTTTTGTTATTTTTATGATGAATGAATACAATAGGTACTAAGGGAGAGAATATATAGAATACAATAGGTGTAAGAAAGGAAAAGATTTAGGAAATAAAATTTTTCATATTATTCTTTCCAAAAATATAAGGGTCAAGCCCTACTAATTCTAACACTAAATGATATGAAAACCTTATCATAAGAGGATTTGAAAACCTAGTATTTGAAAATTAGGAACTCAATTGGTAAACCTCTAATATCAAATTCTAAAACTCCTAATCAATTTGACAACAATCGGACTAGAATTGAATTACCTTTTGATCGAAGACCAACCGAAAAGGAGAACTAGTTCCTCACTCCAATTTCGAACACTCAAGGTAATCAAACTTTACTAAATGTTCTTGCCAAAATTGCGAAAAGGTAGTGAATAGTGATAGAGACTCCTCATCTACTACAGGATTTCTACGGTAGAAAAGCCCCAAAACTTCAATTGTCAAAAACTAACTTGCAATAAAATCCTAATGCATTGTGAAAAGACTAAACTAACCATACTTAAAAGTTATTAAAAAGAATAAAATTGAACAATATTTAAATTACATCACAATTATTAACTAAAATTTACTATTTTTTCTTATTAACTTAAAAGACTTGATTTTATCTACCACACATAAATAATAACTAAAATCTTGTAAAAGTTAAATATTAACTACCAAATATCCATGATATCTATTACAAACTTTGGACAAAGGAAAACATCGTAACAATTCCAGAAGAAAAACATTGAAATTTTAAATTTTCATCTATCGATAGTCAGTCAAACATTAAACAAAGGCAAATATATGTGTGTGGCTGGATTGGATTGGGTCAACACAAAAAAATAAGTAATAAAAAAATCAACCAAGATCCAATTTGAACAAACGAAAACAGAAAATTTTGACCCAATCCAACTCTAGAACAAAAGTAATGCAACCCGATCCAAAAAAAATAGAAAATATTTAACTCAACCATACCAAAGAACAAAAGTAACACAACCCAACACTTATAGTTTGGGTTAGGTTGTTCGGATTGTCAAGTCATTTTGTCATTTGAATATCCTTAGTTGCTACACTAGTATATATCAATTGTTCCGTTTACTGTTAACGGGTGATAACTCACAACTCTTCCTTGGTTGTTTTTCACTAAACAGGTGGGCTATGTTTGGTTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGACACGATGTACAAGGTCGATGTTGCTATATTTTTCCATTTTCTTTAATTATGTATCTACATGATGTAATTCATCCTATAGTCTTTATGAGAGTTTTGTTGTCTGTTACACTTAATTACCATTCAAGTATGTGTGCTCCTTGCAATACTTACTGTTTTTCTGTTATATATAAAAATCTTCCCTTTTTTTATGAGTCTTTGTAATTCTAATGCACTGGGAGCATATTTCTTGTTCACACCTTGCCAAAATTCTGTACCTTCATTTATTGGAGGTTCCATTTACATAATAAAAACCTTGTAACTATGAT

mRNA sequence

GAAATGTCAGGGGCTTGTTCAATCCCCTTCGCCAACATCAAAATCCCCTCCACTTCTTCCTCACCGGCCGCCACCGCCTCTGCCGCTTCTCCCTCCGCCTCCGCCTCCTCTTCCGCTTCTTCTTCATCCTCCCTTCACTCTTCCCTCCGATTCCCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCGCCGCCCTCTCCCCCTTCGCCCACGCCTCCTCTCAAGCCTTCTCCTTCCTCGCAATCGCCTCCCTCACCGGTTTTGAAACAGGATAATGTGATCACATTGGAGTTTCAGAGGCTGAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTGGGCTATGTTTGGTTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGACACGATGTACAAGGTCGATGTTGCTATATTTTTCCATTTTCTTTAATTATGTATCTACATGATGTAATTCATCCTATAGTCTTTATGAGAGTTTTGTTGTCTGTTACACTTAATTACCATTCAAGTATGTGTGCTCCTTGCAATACTTACTGTTTTTCTGTTATATATAAAAATCTTCCCTTTTTTTATGAGTCTTTGTAATTCTAATGCACTGGGAGCATATTTCTTGTTCACACCTTGCCAAAATTCTGTACCTTCATTTATTGGAGGTTCCATTTACATAATAAAAACCTTGTAACTATGAT

Coding sequence (CDS)

ATGTCAGGGGCTTGTTCAATCCCCTTCGCCAACATCAAAATCCCCTCCACTTCTTCCTCACCGGCCGCCACCGCCTCTGCCGCTTCTCCCTCCGCCTCCGCCTCCTCTTCCGCTTCTTCTTCATCCTCCCTTCACTCTTCCCTCCGATTCCCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCGCCGCCCTCTCCCCCTTCGCCCACGCCTCCTCTCAAGCCTTCTCCTTCCTCGCAATCGCCTCCCTCACCGGTTTTGAAACAGGATAATGTGATCACATTGGAGTTTCAGAGGCTGAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTGGGCTATGTTTGGTTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGA

Protein sequence

MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTIRSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPSSQSPPSPVLKQDNVITLEFQRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIIDLE

Homology

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BLAST of MELO3C029825.jh1 vs. NCBI nr
Match: XP_008441491.1 (PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis melo])

HSP 1 Score: 335 bits (858), Expect = 5.40e-115
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRF SSKPFLFTI
Sbjct: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFHSSKPFLFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPSSQSPPSPVLKQDNVITLEFQRLK 120
           RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSP SQSPPSPVLKQDNVITLEFQRLK
Sbjct: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPPSQSPPSPVLKQDNVITLEFQRLK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 191
           LLSNFGIIDLE
Sbjct: 181 LLSNFGIIDLE 191

[Close]

BLAST of MELO3C029825.jh1 vs. NCBI nr
Match: XP_038884716.1 (light-harvesting complex-like protein OHP2, chloroplastic [Benincasa hispida])

HSP 1 Score: 290 bits (741), Expect = 3.50e-97
Identity = 170/194 (87.63%), Postives = 177/194 (91.24%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACSIPFA IKIP  SSSPAA   A SPSASASSSASSSS  H+SLRF SSKPF+FTI
Sbjct: 1   MSGACSIPFAKIKIPPPSSSPAA---AVSPSASASSSASSSSP-HTSLRFSSSKPFVFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPSSQSPPSPV---LKQDNVITLEFQ 120
           RSSQTEGPLRRP+APSLR+PSPPSP SPTPPLKP+P  QSPPSPV   +KQDNVITLEFQ
Sbjct: 61  RSSQTEGPLRRPAAPSLREPSPPSPSSPTPPLKPTPPPQSPPSPVSPVVKQDNVITLEFQ 120

Query: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIIDLE 191
           VKILLSNFGI+DLE
Sbjct: 181 VKILLSNFGIVDLE 190

[Close]

BLAST of MELO3C029825.jh1 vs. NCBI nr
Match: XP_004140959.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucumis sativus] >KGN46119.1 hypothetical protein Csa_005015 [Cucumis sativus])

HSP 1 Score: 289 bits (739), Expect = 5.36e-97
Identity = 170/191 (89.01%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACS PF +IKIPSTSSSPAAT++AAS SAS SSSASSSSSL    RF SSKPFLFTI
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSL----RFSSSKPFLFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPSSQSPPSPVLKQDNVITLEFQRLK 120
           RSSQTEGPLRRPSAPSLRDPSPPSPPS TPPLKP+P  QSPPS     DNVITLEFQRLK
Sbjct: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPS-----DNVITLEFQRLK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 191
           LLSNFGIIDLE
Sbjct: 181 LLSNFGIIDLE 182

[Close]

BLAST of MELO3C029825.jh1 vs. NCBI nr
Match: KAG7016405.1 (Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286 bits (731), Expect = 1.13e-95
Identity = 168/194 (86.60%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACSIPFA IKIP+TSSSPA     ASPSASA+SSASSSS+ HSS+RF SSKPF+FTI
Sbjct: 1   MSGACSIPFAKIKIPATSSSPAT----ASPSASANSSASSSSA-HSSIRFSSSKPFVFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPS-SQSPPSPVL--KQDNVITLEFQ 120
           RSSQTEGPLRRP+APSLR+PSPPSPPSPTPPLKP+P  SQ+PPSP    K DNVITLEFQ
Sbjct: 61  RSSQTEGPLRRPAAPSLREPSPPSPPSPTPPLKPNPPPSQTPPSPAYAAKLDNVITLEFQ 120

Query: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIIDLE 191
           VKILLSNFGI+DLE
Sbjct: 181 VKILLSNFGIVDLE 189

[Close]

BLAST of MELO3C029825.jh1 vs. NCBI nr
Match: XP_023551626.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286 bits (731), Expect = 1.13e-95
Identity = 168/194 (86.60%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACSIPFA IKIP+TSSSPA     ASPSASA+SSASSSS+ HSS+RF SSKPF+FTI
Sbjct: 1   MSGACSIPFAKIKIPATSSSPAT----ASPSASATSSASSSSA-HSSIRFSSSKPFVFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPS-SQSPPSPVL--KQDNVITLEFQ 120
           RSSQTEGPLRRP+APSLR+PSPPSPPSPTPPLKP+P  SQ+PPSP    K DNVITLEFQ
Sbjct: 61  RSSQTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQ 120

Query: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIIDLE 191
           VKILLSNFGI+DLE
Sbjct: 181 VKILLSNFGIVDLE 189

[Close]

BLAST of MELO3C029825.jh1 vs. ExPASy Swiss-Prot
Match: Q9FEC1 (Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP2 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.6e-42
Identity = 113/180 (62.78%), Postives = 131/180 (72.78%), Query Frame = 0


Query: 19  SSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTIRSSQTEGPLRRPSA-PSL 78
           +SP       +PS+S+SSS +SSS   S+    ++KP +F IR SQTEGPLRRPSA P+L
Sbjct: 4   ASPIQCIRILNPSSSSSSSTASSSFRFST----TTKPCVFIIRCSQTEGPLRRPSAPPTL 63

Query: 79  RDPSPPSPPSPTPPLKPSPSSQSPPSP------VLKQDNVITLEFQRLKAKELQEYFKQK 138
           R+P  P PPS        PSS  PPSP       +   +V T+EFQR KAKELQEYFKQK
Sbjct: 64  REPQKPVPPS-------QPSSSPPPSPPPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQK 123

Query: 139 KLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIIDLE 192
           KL+ A QGPFFGF  KNEISNGRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 124 KLEAAGQGPFFGFQPKNEISNGRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

[Close]

BLAST of MELO3C029825.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B3J8 (proline-rich receptor-like protein kinase PERK14 OS=Cucumis melo OX=3656 GN=LOC103485601 PE=4 SV=1)

HSP 1 Score: 335 bits (858), Expect = 2.61e-115
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRF SSKPFLFTI
Sbjct: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFHSSKPFLFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPSSQSPPSPVLKQDNVITLEFQRLK 120
           RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSP SQSPPSPVLKQDNVITLEFQRLK
Sbjct: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPPSQSPPSPVLKQDNVITLEFQRLK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 191
           LLSNFGIIDLE
Sbjct: 181 LLSNFGIIDLE 191

[Close]

BLAST of MELO3C029825.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KBA0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055400 PE=4 SV=1)

HSP 1 Score: 289 bits (739), Expect = 2.59e-97
Identity = 170/191 (89.01%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACS PF +IKIPSTSSSPAAT++AAS SAS SSSASSSSSL    RF SSKPFLFTI
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSL----RFSSSKPFLFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPSSQSPPSPVLKQDNVITLEFQRLK 120
           RSSQTEGPLRRPSAPSLRDPSPPSPPS TPPLKP+P  QSPPS     DNVITLEFQRLK
Sbjct: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPS-----DNVITLEFQRLK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 191
           LLSNFGIIDLE
Sbjct: 181 LLSNFGIIDLE 182

[Close]

BLAST of MELO3C029825.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FIC8 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445596 PE=4 SV=1)

HSP 1 Score: 285 bits (728), Expect = 1.56e-95
Identity = 167/194 (86.08%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACSIPFA IKIP+TSSSPA     ASPSASA+SSASSSS+ HSS+RF S+KPF+FTI
Sbjct: 1   MSGACSIPFAKIKIPATSSSPAT----ASPSASATSSASSSSA-HSSIRFSSTKPFVFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPS-SQSPPSPVL--KQDNVITLEFQ 120
           RSSQTEGPLRRP+APSLR+PSPPSPPSPTPPLKP+P  SQ+PPSP    K DNVITLEFQ
Sbjct: 61  RSSQTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQ 120

Query: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIIDLE 191
           VKILLSNFGI+DLE
Sbjct: 181 VKILLSNFGIVDLE 189

[Close]

BLAST of MELO3C029825.jh1 vs. ExPASy TrEMBL
Match: A0A6J1K1U3 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489352 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 4.47e-95
Identity = 167/194 (86.08%), Postives = 177/194 (91.24%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACSIPFA IKIP+ SSSPA     ASPSASA+SSASSSS+ HSS+RF SSKPF+FTI
Sbjct: 1   MSGACSIPFAKIKIPAASSSPAT----ASPSASATSSASSSSA-HSSIRFSSSKPFVFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSP-SSQSPPSPVL--KQDNVITLEFQ 120
           RSSQTEGPLRRP+APSLR+PSPPSPPSPTPPLKP+P SSQ+PPSP    K DNVITLEFQ
Sbjct: 61  RSSQTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPSSQTPPSPAYAAKLDNVITLEFQ 120

Query: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKLDE DQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEDDQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIIDLE 191
           VKILLSNFGI+DLE
Sbjct: 181 VKILLSNFGIVDLE 189

[Close]

BLAST of MELO3C029825.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HG91 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464005 PE=4 SV=1)

HSP 1 Score: 261 bits (666), Expect = 4.44e-86
Identity = 156/198 (78.79%), Postives = 169/198 (85.35%), Query Frame = 0


Query: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTI 60
           MSGACS PFA IKIP+ SSS AA     SPSASA+SS SSSS+ HSS+RF SSKPF+FTI
Sbjct: 1   MSGACSFPFAKIKIPTVSSSSAAV----SPSASAASSTSSSSA-HSSIRFSSSKPFVFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPSSQSPP-------SPVLKQDNVIT 120
           RSSQT+GP+RRP+APSLR+PSPPSPP   PPLKP PSS + P       + V KQDN IT
Sbjct: 61  RSSQTDGPIRRPAAPSLREPSPPSPP---PPLKPPPSSATAPVAQPSGKAYVAKQDNTIT 120

Query: 121 LEFQRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSN 180
           LEFQR KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSN
Sbjct: 121 LEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSN 180

Query: 181 FVDQVKILLSNFGIIDLE 191
           FVDQVKILLSNFGI+DL+
Sbjct: 181 FVDQVKILLSNFGIVDLD 190

[Close]

BLAST of MELO3C029825.jh1 vs. TAIR 10
Match: AT1G34000.1 (one-helix protein 2 )

HSP 1 Score: 171.8 bits (434), Expect = 5.4e-43
Identity = 113/180 (62.78%), Postives = 131/180 (72.78%), Query Frame = 0


Query: 19  SSPAATASAASPSASASSSASSSSSLHSSLRFPSSKPFLFTIRSSQTEGPLRRPSA-PSL 78
           +SP       +PS+S+SSS +SSS   S+    ++KP +F IR SQTEGPLRRPSA P+L
Sbjct: 4   ASPIQCIRILNPSSSSSSSTASSSFRFST----TTKPCVFIIRCSQTEGPLRRPSAPPTL 63

Query: 79  RDPSPPSPPSPTPPLKPSPSSQSPPSP------VLKQDNVITLEFQRLKAKELQEYFKQK 138
           R+P  P PPS        PSS  PPSP       +   +V T+EFQR KAKELQEYFKQK
Sbjct: 64  REPQKPVPPS-------QPSSSPPPSPPPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQK 123

Query: 139 KLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIIDLE 192
           KL+ A QGPFFGF  KNEISNGRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 124 KLEAAGQGPFFGFQPKNEISNGRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

The following BLAST results are available for this feature:

BLAST of MELO3C029825.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441491.1	5.40e-115	98.95	PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis melo]	[more]
XP_038884716.1	3.50e-97	87.63	light-harvesting complex-like protein OHP2, chloroplastic [Benincasa hispida]	[more]
XP_004140959.1	5.36e-97	89.01	light-harvesting complex-like protein OHP2, chloroplastic [Cucumis sativus] >KGN...	[more]
KAG7016405.1	1.13e-95	86.60	Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperm...	[more]
XP_023551626.1	1.13e-95	86.60	light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp....	[more]

BLAST of MELO3C029825.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FEC1	7.6e-42	62.78	Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of MELO3C029825.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3J8	2.61e-115	98.95	proline-rich receptor-like protein kinase PERK14 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0KBA0	2.59e-97	89.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055400 PE=4 SV=1	[more]
A0A6J1FIC8	1.56e-95	86.08	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata ...	[more]
A0A6J1K1U3	4.47e-95	86.08	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A6J1HG91	4.44e-86	78.79	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata ...	[more]

BLAST of MELO3C029825.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34000.1	5.4e-43	62.78	one-helix protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 102..186 e-value: 4.7E-5 score: 25.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..106
None	No IPR available	PANTHER	PTHR14154:SF83	MYB-LIKE PROTEIN U	coord: 1..190
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 1..190
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 137..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029825.jh1.t1	MELO3C029825.jh1.t1	mRNA