MELO3C029736.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C029736.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionDefensin-like protein 3
Locationchr02: 21521537 .. 21521985 (+)
RNA-Seq ExpressionMELO3C029736.jh1
SyntenyMELO3C029736.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGCAAAAGCTAGAGGAATAATTTAATAGTAAATTTGTTGATAAAGAAAACATATTAAAATGAAAGGAAATGAGGTAGTGGATCACAATATATAAGCAGGGCATGCATTGGATTAAAGCACAAGAAACTGAAAGATTAAGAAGAGAAAGACATGGCAGGAGAATGGAGAAAACTCATATTAGTGGCATTTATCTTTCTAGCCATTGCTTCTGGTACGTACTCAATCTGATGCCATTTTTTCATGTGATCATTTCCAAAATAAAAATAGAGATTATTAACAGAATCATCAATATGTTGCGTTGGTTGTTACTTACAGGATGGATGATGGTGGAGACGGAAGGAAAGCTTTGCTTCAAGCGGATCCCGAAGTTCAAGGGAAGGTGTAATTCAAATGCTGTATGTACCAAAGCTTGCAATACCGGAATGAAAGGAATTTGCTCGAATGTTT

mRNA sequence

AAGGCAAAAGCTAGAGGAATAATTTAATAGTAAATTTGTTGATAAAGAAAACATATTAAAATGAAAGGAAATGAGGTAGTGGATCACAATATATAAGCAGGGCATGCATTGGATTAAAGCACAAGAAACTGAAAGATTAAGAAGAGAAAGACATGGCAGGAGAATGGAGAAAACTCATATTAGTGGCATTTATCTTTCTAGCCATTGCTTCTGGATGGATGATGGTGGAGACGGAAGGAAAGCTTTGCTTCAAGCGGATCCCGAAGTTCAAGGGAAGGTGTAATTCAAATGCTGTATGTACCAAAGCTTGCAATACCGGAATGAAAGGAATTTGCTCGAATGTTT

Coding sequence (CDS)

ATGGCAGGAGAATGGAGAAAACTCATATTAGTGGCATTTATCTTTCTAGCCATTGCTTCTGGATGGATGATGGTGGAGACGGAAGGAAAGCTTTGCTTCAAGCGGATCCCGAAGTTCAAGGGAAGGTGTAATTCAAATGCTGTATGTACCAAAGCTTGCAATACCGGAATGAAAGGAATTTGCTCGAATGTT

Protein sequence

MAGEWRKLILVAFIFLAIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGMKGICSNV
Homology
BLAST of MELO3C029736.jh1 vs. NCBI nr
Match: KAA0062794.1 (defensin-like protein 3 [Cucumis melo var. makuwa] >TYJ96759.1 defensin-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 2.71e-23
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 0

Query: 1  MAGEWRKLILVAFIFLAIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGM--K 60
          MAG W+KL  VAF+FL+IASGWMM ETEGK+CFK+ P FKG+C SN  C KAC+  M   
Sbjct: 1  MAGRWKKLTFVAFVFLSIASGWMMEETEGKICFKQSPSFKGKCTSNDECVKACDIDMWYN 60

Query: 61 GICSN 63
          G+CSN
Sbjct: 61 GVCSN 65

BLAST of MELO3C029736.jh1 vs. NCBI nr
Match: KGN44293.1 (hypothetical protein Csa_016568 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 3.12e-20
Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0

Query: 1  MAGEWRKLILVAFIFL-AIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGM-- 60
          MAG W+KL  VAFIFL AIASGWMMVET GK+CFK+   FKG+C SN  C KAC+T M  
Sbjct: 1  MAGGWKKLTFVAFIFLLAIASGWMMVETAGKICFKQSRSFKGKCISNDECVKACDTDMWY 60

Query: 61 KGICSN 63
           G CSN
Sbjct: 61 DGFCSN 66

BLAST of MELO3C029736.jh1 vs. NCBI nr
Match: XP_038887289.1 (defensin-like protein 2 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 4.43e-20
Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = 0

Query: 1  MAGE-WRKLILVAFIFLAIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGM-- 60
          MAGE WRKL +V FIFLA+ASGWM+VETEGK CFK+ P F+G+C SN  C  AC+  M  
Sbjct: 1  MAGEGWRKLTVVLFIFLALASGWMVVETEGKTCFKQSPSFRGQCTSNNECVGACDNDMWY 60

Query: 61 KGICSN 63
           G CSN
Sbjct: 61 NGYCSN 66

BLAST of MELO3C029736.jh1 vs. NCBI nr
Match: AHA50469.1 (defensin-like protein 3 [Citrullus lanatus])

HSP 1 Score: 72.4 bits (176), Expect = 5.92e-15
Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0

Query: 1  MAG--EWRKLILVAFIFLAIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGMK 60
          MAG  EWRKL +V FIFL++ASGWM+ ETEG+ C++  P FKGRC+S+  C   C+    
Sbjct: 1  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCD---- 60

Query: 61 GICSN 63
          G C++
Sbjct: 61 GFCNH 61

BLAST of MELO3C029736.jh1 vs. NCBI nr
Match: XP_031744629.1 (defensin-1-like [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 3.89e-13
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0

Query: 1  MAGE-WRKLILVAFIFLAIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGMKG 60
          M GE WRKL +V FI L++ASGWM+ ETEG++C++  P+ KG C+SN  C   C+    G
Sbjct: 1  MVGEGWRKLTVVLFILLSLASGWMVAETEGRVCYRPSPRLKGVCSSNDDCIAVCD----G 60

Query: 61 ICSN 63
           CS+
Sbjct: 61 FCSH 60

BLAST of MELO3C029736.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BCI9 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00530 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.31e-23
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 0

Query: 1  MAGEWRKLILVAFIFLAIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGM--K 60
          MAG W+KL  VAF+FL+IASGWMM ETEGK+CFK+ P FKG+C SN  C KAC+  M   
Sbjct: 1  MAGRWKKLTFVAFVFLSIASGWMMEETEGKICFKQSPSFKGKCTSNDECVKACDIDMWYN 60

Query: 61 GICSN 63
          G+CSN
Sbjct: 61 GVCSN 65

BLAST of MELO3C029736.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K447 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239060 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.51e-20
Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0

Query: 1  MAGEWRKLILVAFIFL-AIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGM-- 60
          MAG W+KL  VAFIFL AIASGWMMVET GK+CFK+   FKG+C SN  C KAC+T M  
Sbjct: 1  MAGGWKKLTFVAFIFLLAIASGWMMVETAGKICFKQSRSFKGKCISNDECVKACDTDMWY 60

Query: 61 KGICSN 63
           G CSN
Sbjct: 61 DGFCSN 66

BLAST of MELO3C029736.jh1 vs. ExPASy TrEMBL
Match: W5RQN1 (Defensin-like protein 3 OS=Citrullus lanatus OX=3654 GN=PDF2.3 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.87e-15
Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0

Query: 1  MAG--EWRKLILVAFIFLAIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGMK 60
          MAG  EWRKL +V FIFL++ASGWM+ ETEG+ C++  P FKGRC+S+  C   C+    
Sbjct: 1  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCD---- 60

Query: 61 GICSN 63
          G C++
Sbjct: 61 GFCNH 61

BLAST of MELO3C029736.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EUK4 (defensin Tk-AMP-D4-like OS=Cucurbita moschata OX=3662 GN=LOC111438039 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.81e-10
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 1  MAGE-WRKLILVAFIFLAIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNT 55
          MAG+  R L +V FIFLA+ASGWM+V+TEG+ C+K    F G C S A C   C T
Sbjct: 1  MAGQSLRNLKVVVFIFLALASGWMVVQTEGRTCYKHNDAFIGSCTSTAACADFCIT 56

BLAST of MELO3C029736.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BEY4 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00520 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.43e-09
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 6  RKLILVAFIFLAIASGWMMVETEGKLCFKRIPKFKGRCNSNAVCTKACNTGMKGICS 62
          RKL +V  I L++ASGWM+ ETEG++CF+  P  KG C+S+  C   C+    G CS
Sbjct: 7  RKLTVVLVILLSVASGWMVAETEGRVCFRPRPTLKGVCSSDEDCIAVCD----GFCS 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0062794.12.71e-2364.62defensin-like protein 3 [Cucumis melo var. makuwa] >TYJ96759.1 defensin-like pro... [more]
KGN44293.13.12e-2066.67hypothetical protein Csa_016568 [Cucumis sativus][more]
XP_038887289.14.43e-2063.64defensin-like protein 2 [Benincasa hispida][more]
AHA50469.15.92e-1552.31defensin-like protein 3 [Citrullus lanatus][more]
XP_031744629.13.89e-1350.00defensin-1-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BCI91.31e-2364.62Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K4471.51e-2066.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239060 PE=4 SV=1[more]
W5RQN12.87e-1552.31Defensin-like protein 3 OS=Citrullus lanatus OX=3654 GN=PDF2.3 PE=2 SV=1[more]
A0A6J1EUK42.81e-1053.57defensin Tk-AMP-D4-like OS=Cucurbita moschata OX=3662 GN=LOC111438039 PE=4 SV=1[more]
A0A5D3BEY42.43e-0947.37Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029736.jh1.t1MELO3C029736.jh1.t1mRNA