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MELO3C029683 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTCAGGATTTGAAAAGAAATCAATATGAAGAAAAGACGTTACCTATGATCACCTTTGGGTACTCAATTTGCTCATCCATGGTTTTGCTGCAAGAGGTAAGTTTAATACAAAAAATCCCTTCGAATTTGGACCAATCTATCTATTAGCATTTTGGGCCTCTAAATCCACTGATATTAATACCAAAAAATCCATAAATACCAGTGCATTTGAATCTCTTAGTTTTGGAATTTTTCTCCATCACTTTTGTTCTGCCTTCACATAGTGCTTACCGTGCTTCTACTTTTGGACTTGAATCTCTTAGTTTTGAAAATTTTTGTTTTCAGGTAGTAAGTAAGCAAACATGGTGTATGCAGTAATGAAGCCTATAAAGCCTAGTTTGGAGGAAACACAAGAGCAAATCCACGAGATTAGGATCACTCTTTCTTCAAAAAATGTGAAGAACCTTGAAAAGGGTATCTCCTTATACCTTTATTTTGAAGAAAATTTGATTTTTCTTTTATCTAGTGTTGCATTTGAACTCATATGTTGTTTGTCTCTTGGTTTTGCCTTTTTGTAAATTGTTTCTGAAATGTTGATTCTTCCTCATTTGCTTTGTGATTGTTGTAGTTGTTTCTAATTTGTTAGTTTTTATTCACTTTTCATGTTCTTCTCAATTTTTAATGTGTTAGTTATTTGTTATTTATTTTTCAAATGAACTTTTGATGGTTGCTCTAAGAGAGTCATCCATGATTCACAAATGCATTCAATCCTATTAGGGGGACTTGACTTTACTCAACAACAATGGTTTTGTGTGTTGTAAGTTGATACCTTTAATGAGGGGTTGAAAATTTTTCTTGCTATTTTAAACCTGAAACTTTATGCAAAAAAAAAAAATGTTGAAGATGAAAGTGTATCTGGGGATTCATATTCGTCTCAAATCAGATTCATTCTTTTTCAGTTTGTAGCCATTAGAAATTTTTGGTTTTTTTTTTAATATTTTTAGGTACTGTTATTCATGTTGCTGTAAGGAGTTTGAATTTAGTTCTCTTGGTTACTAAGTGGAATAGAAGAGAGGTTGTTAGGAAAGAAAAAAGGGTTCATCGATGCTTGTGATGCTATCATGCCATTAGGTGCACAGAAGGTCTAGGACAGCCCTCCTTACAAAACCACATTTTTCCTGCCAGTTGCTTTTCATTTTTTATGTCCATCTTCATATGATACCCCATGTTAATATAGTCATTTTTTAAATAGGGTCCATTACTACTTATATTTTTAACAAAGCCTCGATTGCAGCCGCTTGTACTACAATAAAAGAAACATTGGAAAGATTTGTGTAAAAAAAATTATCTGAGATAAATACAAAACTGGTGATTTTCCTTCAATTAGAAACCTCAACAATCTCAGTTTCATTATTACTAGAATCTCCCTAGCGCTTGTATGTACTTGCTTTTTAACTTAGTGTATGTACTTGCTTTTTGTATATTTCAATAACCAAAGGTAGTTTAGTTACATTTCTTTTTTAAATGACATTAGAGATACTTGATTTTAATAATCGGTGATTTTCTAAATTTTAAAGTAGTTTCAGTTTTAATATTGTGTTCTTTTTTATGGTATTGATTTGGTTGTACATTTGGCTGAATGTCAAAATCAAGAAAATCACAAGCACCAAATAATATGTAGGAAATTGATGGTTCAAGTTCAACCTTCAGTCAACTTCTTGGAATTGAAGGTATTACACAAAAAAATTTATCTTACCATGTTTCTCAATTTCTCAATTTAAAAATTTTCAGGCTAAACACCATTATGCGAAGCTAAGGGATCGTGTAGATAGTCAGGCGATCAAGTAGAAAGCTAAATGATCTTTGAAGGTTGAAGACTTTGAAGATTCATGAGTGAATGAGAATGTAAGTTTCTGCAGGTGTCCTTGGTGTGAAATTATTTATATTTTCTTGTGTTACTGATATTTTCCTTAATGAAATTCATGAGTGAATGAGAGCCATCTGAAGTAAACTTCGAAATTAGTTATTGATCCAATTTGGTAATTCTTTTCTGTCGTGCATGTAGCAGAGTCTTTGATGAATAGGAAATGCTGAAGTTGGATATTCAGCCATTGCTTCGCTCTTGAGTTATTGGTCGTTTATTTTGAACATTTTTTCTTTTTTAGTCCCTGCTCACCTAGAATTTTGAATAATGTGTGATGTGAAAGGACATTTAGGTGGACAAACTACAAATGAATGATTAATTATTATTAGGTCTGCACTAGACTTGGGGTGGTCGATGGCATAGGTTGTTGGATTTGTGGTTGAGTATTGTGGTTTAAAACTAGGAAAATAGTGTAATTGTTCTTTTGTGTTCATTTATCAAAATTTGTTATCTATTCAATCAAGACACCTCATTCCAATTTTATGAAGTTGAGTGCCAAGTCAACATTCCATCAAAATTGCAAGGACCAAAAATAGTATAGATCAAAGTTTAGGAGCAATGGAACATAGATGAAAATTTGCTCAGTAGATACATAGATACAATTATAAAATGCACATGAATATGTAACTTAACTTTTTGAATAGTAGTGTCTAAGTTAGTTTTCTCTTCACAGCTTGTTATGAGAAGAGAAGAATTAATTGGTTAAGTATTTTCTCTTGGTTCAAATTCAACCACTCTAATTAAACTTTAAAACATTCTAATCAATAAGCATTCTCAATATTTACATTTGATTTTTGCCGTAAATGTTGGTCTGTAGTACTTTTTTTCCTTCAACATATGATATAGTTTTGCATTCCAATGTTGGAGAAACGTGACCTTTAATGTCAGTGAAAGTGCCATCTTTTTGTTAGCATGAAAGACTTGAAACTTGAAAATATTAGGTTTAAAAAAAAAACCAGTCCCCTTTGTATGAACATGTGTCTTTGTATGCAAAAAAAAAAAAAAAAAAAAAAGCAGGTGTGCTTGAAGCCTTCTTGTTACTTTTATGCTGAGTGCTATATTTGTATTAGTTGTTATACAACTTTATTCCAAAATCATGGGTTAATTTGTCTGTCACCTTCAATATATTTGACCCCATTTAATGACTTATGTATTTTATGCAGATTATTCCATTTTTGTAGGTTGCCCAACATACTTAAGGAACTTCTGTTTTAAAGGTTAGAACACTTTCTTCTTATAACACTTGCATAATTATGCAATTCGCTATTAAGTAGTATTTGTTAAGGACTTCATGTGTTTGTGTACTTTGTTTCCATCACTTCTGAGCAATGATGAACCTTCTATAGAGGCATATATTAGTTGCTCTTCCGATGGAATGTCTCTCTTTTATTCTTAACATGCGTATGAGCTCATTAAATCACTTATGTACCAAGTAATTGCACATAGATGTTTGGAAAACCAAGGTTGTGATGTAGTTCACTTCTTTTTAATATAAACGATGACAAGTGACATTTGCTCCCTTTATTGAACTGTCATTTCAATATTTCTGTGATACATACTTCAAGATTGCTTCCTTATTGAACAAGATATTTCACTGAAGTTGAAGCATTTATTAGAGCTCTTCACAAGTTCTTTACTTGTTAGTGAATTGTACAGGCATATAATCATTGTGGCATCGCTCGATTTGCAAAATAGTTGAACCAAGTATGTATTGAGATTGTTGTTTACTCATTTGTGCTTTTGTGAACTATAATATTAACTCGTGAACATAGGGAAGGTTAGCTCTAACCATTGAAATATTTAGTGCCTTGAAATTGCTAGGATCCAACATTTTTTTTTCAAAGTTACCTTATTAGAATTGTAAAGATTAAATGGTTTATTTTGATATTGCTTGTAGAATGATTGAAGTCATCAGATTGAAAGCTAAGCGATTGTGTAGATAG GTTCAGGATTTGAAAAGAAATCAATATGAAGAAAAGACGTTACCTATGATCACCTTTGGGTACTCAATTTGCTCATCCATGGTTTTGCTGCAAGAGGTAGTAAGTAAGCAAACATGGTGTATGCAGTAATGAAGCCTATAAAGCCTAGTTTGGAGGAAACACAAGAGCAAATCCACGAGATTAGGATCACTCTTTCTTCAAAAAATGTGAAGAACCTTGAAAAGGGTACTGTTATTCATGTTGCTGTAAGGAGTTTGAATTTAGTTCTCTTGGTTACTAAGTGGAATAGAAGAGAGGGTCCATTACTACTTATATTTTTAACAAAGCCTCGATTGCAGCCGCTTGCTAAACACCATTATGCGAAGCTAAGGGATCGTGTAGATAGTCAGGCGATCAATCCCTGCTCACCTAGAATTTTGAATAATGTCTGCACTAGACTTGGGGTGGTCGATGGCATAGGTTGCCCAACATACTTAAGGAACTTCTGTTTTAAAGTATTTGTTAAGGACTTCATGTGTTTGTGTACTTTGTTTCCATCACTTCTGAGCAATGATGAACCTTCTATAGAGGCATATATTAGTTGCTCTTCCGATGGAATAATGATTGAAGTCATCAGATTGAAAGCTAAGCGATTGTGTAGATAG ATGGTGTATGCAGTAATGAAGCCTATAAAGCCTAGTTTGGAGGAAACACAAGAGCAAATCCACGAGATTAGGATCACTCTTTCTTCAAAAAATGTGAAGAACCTTGAAAAGGGTACTGTTATTCATGTTGCTGTAAGGAGTTTGAATTTAGTTCTCTTGGTTACTAAGTGGAATAGAAGAGAGGGTCCATTACTACTTATATTTTTAACAAAGCCTCGATTGCAGCCGCTTGCTAAACACCATTATGCGAAGCTAAGGGATCGTGTAGATAGTCAGGCGATCAATCCCTGCTCACCTAGAATTTTGAATAATGTCTGCACTAGACTTGGGGTGGTCGATGGCATAGGTTGCCCAACATACTTAAGGAACTTCTGTTTTAAAGTATTTGTTAAGGACTTCATGTGTTTGTGTACTTTGTTTCCATCACTTCTGAGCAATGATGAACCTTCTATAGAGGCATATATTAGTTGCTCTTCCGATGGAATAATGATTGAAGTCATCAGATTGAAAGCTAAGCGATTGTGTAGATAG MVYAVMKPIKPSLEETQEQIHEIRITLSSKNVKNLEKGTVIHVAVRSLNLVLLVTKWNRREGPLLLIFLTKPRLQPLAKHHYAKLRDRVDSQAINPCSPRILNNVCTRLGVVDGIGCPTYLRNFCFKVFVKDFMCLCTLFPSLLSNDEPSIEAYISCSSDGIMIEVIRLKAKRLCR Homology
BLAST of MELO3C029683 vs. NCBI nr
Match: TYK11796.1 (40S ribosomal protein S20-2-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 2.3e-10 Identity = 49/90 (54.44%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of MELO3C029683 vs. NCBI nr
Match: RZB73557.1 (40S ribosomal protein S20-2 [Glycine soja]) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-07 Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of MELO3C029683 vs. NCBI nr
Match: TQD76250.1 (hypothetical protein C1H46_038198 [Malus baccata]) HSP 1 Score: 65.9 bits (159), Expect = 4.1e-07 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0
BLAST of MELO3C029683 vs. NCBI nr
Match: XP_038685497.1 (40S ribosomal protein S20-2-like [Tripterygium wilfordii]) HSP 1 Score: 64.7 bits (156), Expect = 9.1e-07 Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of MELO3C029683 vs. NCBI nr
Match: OMO78420.1 (Ribosomal protein S10 [Corchorus olitorius]) HSP 1 Score: 64.7 bits (156), Expect = 9.1e-07 Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of MELO3C029683 vs. ExPASy Swiss-Prot
Match: Q9STY6 (40S ribosomal protein S20-2 OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05 Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
BLAST of MELO3C029683 vs. ExPASy Swiss-Prot
Match: P49200 (40S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05 Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of MELO3C029683 vs. ExPASy TrEMBL
Match: A0A5D3CMZ2 (40S ribosomal protein S20-2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00060 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10 Identity = 49/90 (54.44%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of MELO3C029683 vs. ExPASy TrEMBL
Match: A0A445HIH6 (40S ribosomal protein S20-2 OS=Glycine soja OX=3848 GN=D0Y65_032959 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.2e-08 Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of MELO3C029683 vs. ExPASy TrEMBL
Match: A0A540KPW4 (Ribosomal_S10 domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_038198 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.0e-07 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0
BLAST of MELO3C029683 vs. ExPASy TrEMBL
Match: A0A1R3IG42 (Ribosomal protein S10 OS=Corchorus capsularis OX=210143 GN=CCACVL1_12358 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.4e-07 Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of MELO3C029683 vs. ExPASy TrEMBL
Match: A0A2P6SMI1 (Putative ribosomal protein S10 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0374951 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.4e-07 Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of MELO3C029683 vs. TAIR 10
Match: AT3G47370.2 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 51.6 bits (122), Expect = 7.5e-07 Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
BLAST of MELO3C029683 vs. TAIR 10
Match: AT3G47370.1 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 51.6 bits (122), Expect = 7.5e-07 Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
BLAST of MELO3C029683 vs. TAIR 10
Match: AT3G47370.3 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 51.6 bits (122), Expect = 7.5e-07 Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
BLAST of MELO3C029683 vs. TAIR 10
Match: AT3G45030.1 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 51.2 bits (121), Expect = 9.7e-07 Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of MELO3C029683 vs. TAIR 10
Match: AT5G62300.1 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 51.2 bits (121), Expect = 9.7e-07 Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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