Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAATGAGGAGGATAGCACTCTTGTGGAGTGTTTAATGAAGTTGATGTCAATGGGGAATGGAAATCGGATAATGGTACGTTTCAGCCAGGTTACCACGCCCAGTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCACGCAACGACAATAATTGATTGTAGAATTAAAACACTGAAGCGGACATTCCAGGCCATCACCGAAATGCAGGGGCCAGCCTACAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATTATTGCGGAGAAAGAATTATTTGATAATTCGGCTAGGGTAAGGAAAATAATATAAACGTCACACAACGTTCGCAATGTACATTTACTTAACAATTTTTTTATTAGTACTCATAAGTGATCTTTTTTTTCCCCGCAATCGCATCCTGTAGCGAAGGGACTCCTCAACAAACTGTTCTTGTATTACGATGAACTTACATATGTGTTCGGTCGCGATAGGGTGACGGGTCGGTTCACTGAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATGACGGATTTGATATGGGAGATGGAAACGAGAAGTTCCCGCCCATGTACAGCTAGAGGATTGACCTCTCGCAAGACGATGTACGCGCATCATGACATTCTCACGCTTCAGAGGGTAGGACTGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAAAGGTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAACAAGCAACTCAGGATGATTGCGGAGTGGCCTGTACACGCCCTTGACAATGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTAACGAGTTTGGATAAGGCGCTATGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTTGGGGTTTCATACTCATGCCTGAGGATGAGAGAGAGGGATTTTGTAGAGTCCTCTCCTACGAGACATCACGAGATAGTTTATGTTTGTATCGACCTGGGTTGCTTCTTATTTGCTTACATTTTTTTTTCTGTATGATATTGACTGTTTATGCTTTTGCTATTGTAGACAACTATTTTTTTTCTTCATAATGTTTATTTAAAATTAAGGAAAATGGTCACAATTTCACGCAAGCGTTATAA
mRNA sequence
ATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAATGAGGAGGATAGCACTCTTGTGGAGTGTTTAATGAAGTTGATGTCAATGGGGAATGGAAATCGGATAATGGTACGTTTCAGCCAGGTTACCACGCCCAGTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCACGCAACGACAATAATTGATTGTAGAATTAAAACACTGAAGCGGACATTCCAGGCCATCACCGAAATGCAGGGGCCAGCCTACAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATTATTGCGGAGAAAGAATTATTTGATAATTCGGCTAGGGGACTCCTCAACAAACTGTTCTTGTATTACGATGAACTTACATATGTGTTCGGTCGCGATAGGGTGACGGGTCGGTTCACTGAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATGACGGATTTGATATGGGAGATGGAAACGAGAAGTTCCCGCCCATGACTGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAAAGGTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAACAAGCAACTCAGGATGATTGCGGAGTGGCCTGTACACGCCCTTGACAATGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTAACGAGTTTGGATAAGGCGCTATGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTTGGGGTTTCATACTCATGCCTGAGGATGAGAGAGAGGGATTTTGTAGAGTCCTCTCCTACGAGACATCACGAGATAGTTTATGAAAATGGTCACAATTTCACGCAAGCGTTATAA
Coding sequence (CDS)
ATGGCGGAGAAACTACCTGGATGTCAGGTCCACGCAACGACAATAATTGATTGTAGAATTAAAACACTGAAGCGGACATTCCAGGCCATCACCGAAATGCAGGGGCCAGCCTACAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATTATTGCGGAGAAAGAATTATTTGATAATTCGGCTAGGGGACTCCTCAACAAACTGTTCTTGTATTACGATGAACTTACATATGTGTTCGGTCGCGATAGGGTGACGGGTCGGTTCACTGAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATGACGGATTTGATATGGGAGATGGAAACGAGAAGTTCCCGCCCATGACTGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAAAGGTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAACAAGCAACTCAGGATGATTGCGGAGTGGCCTGTACACGCCCTTGACAATGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTAACGAGTTTGGATAAGGCGCTATGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTTGGGGTTTCATACTCATGCCTGAGGATGAGAGAGAGGGATTTTGTAGAGTCCTCTCCTACGAGACATCACGAGATAGTTTATGAAAATGGTCACAATTTCACGCAAGCGTTATAA
Protein sequence
MAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDNSARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGYDGFDMGDGNEKFPPMTGSSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKALCKGIFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVYENGHNFTQAL
Homology
BLAST of MELO3C029657 vs. NCBI nr
Match:
TYK06435.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 355.9 bits (912), Expect = 2.7e-94
Identity = 177/219 (80.82%), Postives = 184/219 (84.02%), Query Frame = 0
Query: 13 TTIIDCRIKTLK----RTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDNSARGLLNKL 72
+T+++C +K + AITEMQGPAYSGFGWNDEEK IIAEKELFDNSA
Sbjct: 18 STLVECLMKLMSMGNGNRIMAITEMQGPAYSGFGWNDEEKYIIAEKELFDNSA------- 77
Query: 73 FLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGYDGFDMGDGNEKFPPMTGSSGSKRKR 132
RVTGRF ETFVDVGSNEPGGYDGFDMGDGNEKFPPMTGSSGSKRKR
Sbjct: 78 --------------RVTGRFAETFVDVGSNEPGGYDGFDMGDGNEKFPPMTGSSGSKRKR 137
Query: 133 GSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKAL 192
GSQRKVDVEGIHLALDQTN+QLRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKAL
Sbjct: 138 GSQRKVDVEGIHLALDQTNEQLRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKAL 197
Query: 193 CKGIFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVY 228
CK IFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVY
Sbjct: 198 CKDIFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVY 215
BLAST of MELO3C029657 vs. NCBI nr
Match:
KAA0048328.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK10671.1 retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 328.6 bits (841), Expect = 4.6e-86
Identity = 170/244 (69.67%), Postives = 186/244 (76.23%), Query Frame = 0
Query: 1 MAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN- 60
M EKLPGCQV T +IDCRIKTLKRTFQAI EM+GP YSGFGWNDEEKCII EKELFDN
Sbjct: 52 MVEKLPGCQVRVTIVIDCRIKTLKRTFQAIAEMRGPTYSGFGWNDEEKCIIVEKELFDNW 111
Query: 61 -----SARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEP-GGYDGFDMGDGNE 120
+A+GLLNK F YY+ELTYVFGRDR TGRF+ETF DVGSNEP GGYD FDMGDGN+
Sbjct: 112 VRSHLAAKGLLNKPFSYYNELTYVFGRDRATGRFSETFADVGSNEPGGGYDRFDMGDGNK 171
Query: 121 KFPPMTGSSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFR 180
FPP+TGSSGSKRKRGSQR VDVE IHLALDQTN+QLR IAEWP L NDNHVRTEFFR
Sbjct: 172 AFPPVTGSSGSKRKRGSQRDVDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFR 231
Query: 181 ILREMPELTSLDKALCKGIFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVYENGHNF 238
ILREM ELTSLD+AL + + + ER+ S PTRH EIVY+ + F
Sbjct: 232 ILREMSELTSLDRALLQRHLLSRMDDLR-GFVLMPEDEREGFCSPPTRHREIVYKIDYVF 291
BLAST of MELO3C029657 vs. NCBI nr
Match:
KAA0065929.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 321.2 bits (822), Expect = 7.3e-84
Identity = 161/195 (82.56%), Postives = 168/195 (86.15%), Query Frame = 0
Query: 1 MAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN- 60
MAEKLPGCQV ATT+IDCRIKTLKRTFQAI EM+GPA SGFGWNDE KCIIAEKELFDN
Sbjct: 52 MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEVKCIIAEKELFDNW 111
Query: 61 -----SARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNE-PGGYDGFDMGDGNE 120
+A+GLLNK F YYDELTYVFGRDR TGRF ETF DVGSNE GGYD FD+GDGNE
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGGGYDRFDIGDGNE 171
Query: 121 KFPPMTGSSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFR 180
FPPMTGSSGSKRKRGSQR DVE IHLALDQTN+QLR IAEWP L NDNHVRTEFFR
Sbjct: 172 DFPPMTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPSRNLANDNHVRTEFFR 231
Query: 181 ILREMPELTSLDKAL 189
ILREMPELTSLD+AL
Sbjct: 232 ILREMPELTSLDRAL 246
BLAST of MELO3C029657 vs. NCBI nr
Match:
KAA0067583.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 319.7 bits (818), Expect = 2.1e-83
Identity = 167/249 (67.07%), Postives = 176/249 (70.68%), Query Frame = 0
Query: 1 MAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN- 60
MAEKLPGCQV ATT+IDCRIKTLKRTFQAI EM+GPA SGFGWNDEEKCI+AEKELFDN
Sbjct: 52 MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 111
Query: 61 -----SARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEP-GGYDGFDMGDGNE 120
+A+ LLNK F YYDELTYVFGRDR TGRF ETF DVGSNEP GGYD FDMGDGNE
Sbjct: 112 VRSHPAAKELLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171
Query: 121 KFPPM------------------------TGSSGSKRKRGSQRKVDVEGIHLALDQTNKQ 180
FPP+ TGSSGSKRKRGSQR DVE I+L LDQTN+Q
Sbjct: 172 DFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIYLVLDQTNEQ 231
Query: 181 LRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKALCKGIFCLVWTTFGVSYSCLRM 219
LR IAEWP L NDNH F L CKGIFCLVWTTFGVSYSCLRM
Sbjct: 232 LRQIAEWPARNLANDNHCARNFSTYCVRCQNLRVWIGRYCKGIFCLVWTTFGVSYSCLRM 291
BLAST of MELO3C029657 vs. NCBI nr
Match:
KAA0053187.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 319.3 bits (817), Expect = 2.8e-83
Identity = 157/195 (80.51%), Postives = 169/195 (86.67%), Query Frame = 0
Query: 1 MAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN- 60
MAEKLPGCQV ATT+IDCRIKTLKR FQAI EM+GPA SGFGWNDEEKCI+AEKELFDN
Sbjct: 52 MAEKLPGCQVRATTVIDCRIKTLKRMFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 111
Query: 61 -----SARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEP-GGYDGFDMGDGNE 120
+A+GLLNKLF YYDELTYVFGRD+ T RF ETF DVGSNEP GGYD FDMGDGNE
Sbjct: 112 VRSHPAAKGLLNKLFPYYDELTYVFGRDKATDRFAETFADVGSNEPGGGYDRFDMGDGNE 171
Query: 121 KFPPMTGSSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFR 180
FPP+TGSSGSKRKRGSQR ++E I+LALDQTN+QLR IAEWP L NDNHVRTEFFR
Sbjct: 172 DFPPVTGSSGSKRKRGSQRDFELEAIYLALDQTNEQLRQIAEWPARNLANDNHVRTEFFR 231
Query: 181 ILREMPELTSLDKAL 189
ILREMPELTSLD+AL
Sbjct: 232 ILREMPELTSLDRAL 246
BLAST of MELO3C029657 vs. ExPASy TrEMBL
Match:
A0A5D3C4X5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001400 PE=4 SV=1)
HSP 1 Score: 355.9 bits (912), Expect = 1.3e-94
Identity = 177/219 (80.82%), Postives = 184/219 (84.02%), Query Frame = 0
Query: 13 TTIIDCRIKTLK----RTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDNSARGLLNKL 72
+T+++C +K + AITEMQGPAYSGFGWNDEEK IIAEKELFDNSA
Sbjct: 18 STLVECLMKLMSMGNGNRIMAITEMQGPAYSGFGWNDEEKYIIAEKELFDNSA------- 77
Query: 73 FLYYDELTYVFGRDRVTGRFTETFVDVGSNEPGGYDGFDMGDGNEKFPPMTGSSGSKRKR 132
RVTGRF ETFVDVGSNEPGGYDGFDMGDGNEKFPPMTGSSGSKRKR
Sbjct: 78 --------------RVTGRFAETFVDVGSNEPGGYDGFDMGDGNEKFPPMTGSSGSKRKR 137
Query: 133 GSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKAL 192
GSQRKVDVEGIHLALDQTN+QLRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKAL
Sbjct: 138 GSQRKVDVEGIHLALDQTNEQLRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKAL 197
Query: 193 CKGIFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVY 228
CK IFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVY
Sbjct: 198 CKDIFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVY 215
BLAST of MELO3C029657 vs. ExPASy TrEMBL
Match:
A0A5A7TZE1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00330 PE=4 SV=1)
HSP 1 Score: 328.6 bits (841), Expect = 2.2e-86
Identity = 170/244 (69.67%), Postives = 186/244 (76.23%), Query Frame = 0
Query: 1 MAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN- 60
M EKLPGCQV T +IDCRIKTLKRTFQAI EM+GP YSGFGWNDEEKCII EKELFDN
Sbjct: 52 MVEKLPGCQVRVTIVIDCRIKTLKRTFQAIAEMRGPTYSGFGWNDEEKCIIVEKELFDNW 111
Query: 61 -----SARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEP-GGYDGFDMGDGNE 120
+A+GLLNK F YY+ELTYVFGRDR TGRF+ETF DVGSNEP GGYD FDMGDGN+
Sbjct: 112 VRSHLAAKGLLNKPFSYYNELTYVFGRDRATGRFSETFADVGSNEPGGGYDRFDMGDGNK 171
Query: 121 KFPPMTGSSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFR 180
FPP+TGSSGSKRKRGSQR VDVE IHLALDQTN+QLR IAEWP L NDNHVRTEFFR
Sbjct: 172 AFPPVTGSSGSKRKRGSQRDVDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFR 231
Query: 181 ILREMPELTSLDKALCKGIFCLVWTTFGVSYSCLRMRERDFVESSPTRHHEIVYENGHNF 238
ILREM ELTSLD+AL + + + ER+ S PTRH EIVY+ + F
Sbjct: 232 ILREMSELTSLDRALLQRHLLSRMDDLR-GFVLMPEDEREGFCSPPTRHREIVYKIDYVF 291
BLAST of MELO3C029657 vs. ExPASy TrEMBL
Match:
A0A5A7VKT2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G001150 PE=4 SV=1)
HSP 1 Score: 321.2 bits (822), Expect = 3.5e-84
Identity = 161/195 (82.56%), Postives = 168/195 (86.15%), Query Frame = 0
Query: 1 MAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN- 60
MAEKLPGCQV ATT+IDCRIKTLKRTFQAI EM+GPA SGFGWNDE KCIIAEKELFDN
Sbjct: 52 MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEVKCIIAEKELFDNW 111
Query: 61 -----SARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNE-PGGYDGFDMGDGNE 120
+A+GLLNK F YYDELTYVFGRDR TGRF ETF DVGSNE GGYD FD+GDGNE
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGGGYDRFDIGDGNE 171
Query: 121 KFPPMTGSSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFR 180
FPPMTGSSGSKRKRGSQR DVE IHLALDQTN+QLR IAEWP L NDNHVRTEFFR
Sbjct: 172 DFPPMTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPSRNLANDNHVRTEFFR 231
Query: 181 ILREMPELTSLDKAL 189
ILREMPELTSLD+AL
Sbjct: 232 ILREMPELTSLDRAL 246
BLAST of MELO3C029657 vs. ExPASy TrEMBL
Match:
A0A5A7VHM3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00480 PE=4 SV=1)
HSP 1 Score: 319.7 bits (818), Expect = 1.0e-83
Identity = 167/249 (67.07%), Postives = 176/249 (70.68%), Query Frame = 0
Query: 1 MAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN- 60
MAEKLPGCQV ATT+IDCRIKTLKRTFQAI EM+GPA SGFGWNDEEKCI+AEKELFDN
Sbjct: 52 MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 111
Query: 61 -----SARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEP-GGYDGFDMGDGNE 120
+A+ LLNK F YYDELTYVFGRDR TGRF ETF DVGSNEP GGYD FDMGDGNE
Sbjct: 112 VRSHPAAKELLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171
Query: 121 KFPPM------------------------TGSSGSKRKRGSQRKVDVEGIHLALDQTNKQ 180
FPP+ TGSSGSKRKRGSQR DVE I+L LDQTN+Q
Sbjct: 172 DFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIYLVLDQTNEQ 231
Query: 181 LRMIAEWPVHALDNDNHVRTEFFRILREMPELTSLDKALCKGIFCLVWTTFGVSYSCLRM 219
LR IAEWP L NDNH F L CKGIFCLVWTTFGVSYSCLRM
Sbjct: 232 LRQIAEWPARNLANDNHCARNFSTYCVRCQNLRVWIGRYCKGIFCLVWTTFGVSYSCLRM 291
BLAST of MELO3C029657 vs. ExPASy TrEMBL
Match:
A0A5A7UFB7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1192G00100 PE=4 SV=1)
HSP 1 Score: 319.3 bits (817), Expect = 1.3e-83
Identity = 157/195 (80.51%), Postives = 169/195 (86.67%), Query Frame = 0
Query: 1 MAEKLPGCQVHATTIIDCRIKTLKRTFQAITEMQGPAYSGFGWNDEEKCIIAEKELFDN- 60
MAEKLPGCQV ATT+IDCRIKTLKR FQAI EM+GPA SGFGWNDEEKCI+AEKELFDN
Sbjct: 52 MAEKLPGCQVRATTVIDCRIKTLKRMFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 111
Query: 61 -----SARGLLNKLFLYYDELTYVFGRDRVTGRFTETFVDVGSNEP-GGYDGFDMGDGNE 120
+A+GLLNKLF YYDELTYVFGRD+ T RF ETF DVGSNEP GGYD FDMGDGNE
Sbjct: 112 VRSHPAAKGLLNKLFPYYDELTYVFGRDKATDRFAETFADVGSNEPGGGYDRFDMGDGNE 171
Query: 121 KFPPMTGSSGSKRKRGSQRKVDVEGIHLALDQTNKQLRMIAEWPVHALDNDNHVRTEFFR 180
FPP+TGSSGSKRKRGSQR ++E I+LALDQTN+QLR IAEWP L NDNHVRTEFFR
Sbjct: 172 DFPPVTGSSGSKRKRGSQRDFELEAIYLALDQTNEQLRQIAEWPARNLANDNHVRTEFFR 231
Query: 181 ILREMPELTSLDKAL 189
ILREMPELTSLD+AL
Sbjct: 232 ILREMPELTSLDRAL 246
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK06435.1 | 2.7e-94 | 80.82 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0048328.1 | 4.6e-86 | 69.67 | retrotransposon protein [Cucumis melo var. makuwa] >TYK10671.1 retrotransposon p... | [more] |
KAA0065929.1 | 7.3e-84 | 82.56 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0067583.1 | 2.1e-83 | 67.07 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0053187.1 | 2.8e-83 | 80.51 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C4X5 | 1.3e-94 | 80.82 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7TZE1 | 2.2e-86 | 69.67 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7VKT2 | 3.5e-84 | 82.56 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7VHM3 | 1.0e-83 | 67.07 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7UFB7 | 1.3e-83 | 80.51 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |