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MELO3C029652 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCTAAATAAACGGCTTCCCGCTTTCACAGCTAAACCAACCAACCAACCAATTCCGATTGTCTTCTCTCTCAATTCCTCTTTCACTTCCTCGATTTCTTCCCTATTTTTCCAAACCCTAAACACTCTGCTCTCCAAACATTTCATTACTTTAATCTCAAATCCTCCATTATTATTATTCCTCAATAATCAATCTCTTCATATATATGTTCTTCATGTCTCAAATTGAACCCATTGTCCCCGATTCTTGCTGTATCTCCCCTCGCTTTCATACCAACAGTTTTCGCCGCTCTCTTCGCTACAATCGCCTTCCGCCCCAGCTCCTCCGCCTCTCCGTCTTGAAATTGGACGGCTCTTCTTTCGGTAACTGTTTCCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTCTTTTTCTATTCATTTGCCCTACCTCGATCTGATTGCAAATCCGAATGTTCTGCTTTCGATGTATTTGTTTAATTGATAGAGGTGCAAGTTGAAAGGACGGCGACGGTGGCCGCGGTTAGAGATGCGGTGGAGAGTGTTTTCTGTGAAATGTCGATGAATAAAGAAGATTTCAATATTTCTTGGTACGTTGTTGGGGATTTGGAATACTGAATCCCGTATATTAATGTATTATATATATGTGTGTGTGAATAATGTGTGTGTTGAATTGGAAACTGAAACTTATCAAAAGTAGTTTGTTCAATTATTCTTTATTTGGTTTCAATTGTAGGCCACATGTGTGGGGTCATTTTTGCTTATGCTATAAACATTTCAAGCTCATGGACGACAAATCTCGTATTCAACATTTTGGAATTCGTGATGGTGACCAGGTATTCCCATCTTCCTTGTTTTGTAATCAAAATGAACTACATCCTACCTCCTCCAAATCTGTAGAGGTAATCAAAATACAATGACACACTACTTTTTATCTCTCGCATTTACCTTTATCTTTACCGTTATCGTTAGGGGTCAAATGGTATTATAAAAGGTAAAGATAAAATAACAAATTTTAATTTTAATTAATAAAAGCAACTAAAAGCGATTCAATTACATTTGCAATTCAGACACATTACAAATGATTCAACAAATGGAATCCCTGTACAACTACATTCATTTTCATTATGGACTAGCAAAGGTGAGCTTAGTTGGATTTAATTTCTCGTTATCCACTTGTTTCTCGTAAAAAAAGATAAAAACCATTAGAGAAAAACAAGTATAATCTTCAAAAACCAAATTGGTTGATCAAATTAAACAATTATTTCTCTGTTTCTGTTGTTTGTGACATTTGAGTATTGATGAATTATGTGTTGGTTCCCTTATGCAGCTGCATTTTGTGGAATTGAGATGTCCCGTAGAAGAATAAATAGATATGTAGAAAGAAATATAGAAAGGTTGAAGAGATGAACGGCTTCTGGTATAAAGTGGTCAGAAGGTTTTGGGCGTGAATTATTATTATAAATTTGGTCTAATGATGGATCTTTTTTCTTCTATTTTTCCCGACACCTAACAAGACGACGGTCATGTTTGGATTGATTTTCTAAGTATTTATAAGTACAAAGAAATGTTTACAAATGGATAGAAAGTTAATCCAAACGGATCCTTCGTTTCTGTGATTCAACACTGTACTGTACTGTTTCAATTCAGAAATATGATTCATTAGAAGATGAGTCTCGAATGTAGTTAAATTGCTTTAAGAGAAAAACAGAAGACAGAATGGCGATCATACTCTTCTTTGATTTTTGATCTCAGATGGTGAACCCCATCGCCTTGTCTAACTAA TCCTAAATAAACGGCTTCCCGCTTTCACAGCTAAACCAACCAACCAACCAATTCCGATTGTCTTCTCTCTCAATTCCTCTTTCACTTCCTCGATTTCTTCCCTATTTTTCCAAACCCTAAACACTCTGCTCTCCAAACATTTCATTACTTTAATCTCAAATCCTCCATTATTATTATTCCTCAATAATCAATCTCTTCATATATATGTTCTTCATGTCTCAAATTGAACCCATTGTCCCCGATTCTTGCTGTATCTCCCCTCGCTTTCATACCAACAGTTTTCGCCGCTCTCTTCGCTACAATCGCCTTCCGCCCCAGCTCCTCCGCCTCTCCGTCTTGAAATTGGACGGCTCTTCTTTCGAGGTGCAAGTTGAAAGGACGGCGACGGTGGCCGCGGTTAGAGATGCGGTGGAGAGTGTTTTCTGTGAAATGCCACATGTGTGGGGTCATTTTTGCTTATGCTATAAACATTTCAAGCTCATGGACGACAAATCTCGTATTCAACATTTTGGAATTCGTGATGGTGACCAGATGGTGAACCCCATCGCCTTGTCTAACTAA ATGTTCTTCATGTCTCAAATTGAACCCATTGTCCCCGATTCTTGCTGTATCTCCCCTCGCTTTCATACCAACAGTTTTCGCCGCTCTCTTCGCTACAATCGCCTTCCGCCCCAGCTCCTCCGCCTCTCCGTCTTGAAATTGGACGGCTCTTCTTTCGAGGTGCAAGTTGAAAGGACGGCGACGGTGGCCGCGGTTAGAGATGCGGTGGAGAGTGTTTTCTGTGAAATGCCACATGTGTGGGGTCATTTTTGCTTATGCTATAAACATTTCAAGCTCATGGACGACAAATCTCGTATTCAACATTTTGGAATTCGTGATGGTGACCAGATGGTGAACCCCATCGCCTTGTCTAACTAA MFFMSQIEPIVPDSCCISPRFHTNSFRRSLRYNRLPPQLLRLSVLKLDGSSFEVQVERTATVAAVRDAVESVFCEMPHVWGHFCLCYKHFKLMDDKSRIQHFGIRDGDQMVNPIALSN Homology
BLAST of MELO3C029652 vs. NCBI nr
Match: XP_008443964.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like isoform X2 [Cucumis melo] >KAA0050134.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like isoform X2 [Cucumis melo var. makuwa] >TYK06388.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55 Identity = 109/121 (90.08%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of MELO3C029652 vs. NCBI nr
Match: XP_008443963.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like isoform X1 [Cucumis melo]) HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54 Identity = 109/121 (90.08%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of MELO3C029652 vs. NCBI nr
Match: XP_011655436.1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Cucumis sativus] >KGN65130.1 hypothetical protein Csa_023500 [Cucumis sativus]) HSP 1 Score: 214.2 bits (544), Expect = 6.3e-52 Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of MELO3C029652 vs. NCBI nr
Match: XP_038880358.1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Benincasa hispida]) HSP 1 Score: 195.7 bits (496), Expect = 2.3e-46 Identity = 93/118 (78.81%), Postives = 102/118 (86.44%), Query Frame = 0
BLAST of MELO3C029652 vs. NCBI nr
Match: XP_023531556.1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.0 bits (445), Expect = 1.9e-40 Identity = 87/126 (69.05%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of MELO3C029652 vs. ExPASy Swiss-Prot
Match: Q84WS8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP25 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 3.7e-07 Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of MELO3C029652 vs. ExPASy TrEMBL
Match: A0A5A7U4H4 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00840 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 109/121 (90.08%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of MELO3C029652 vs. ExPASy TrEMBL
Match: A0A1S3BA12 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487425 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 109/121 (90.08%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of MELO3C029652 vs. ExPASy TrEMBL
Match: A0A1S3B9C0 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487425 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 5.0e-55 Identity = 109/121 (90.08%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of MELO3C029652 vs. ExPASy TrEMBL
Match: A0A0A0LT94 (Ubiquitin_4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G231020 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.0e-52 Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of MELO3C029652 vs. ExPASy TrEMBL
Match: A0A6J1I9W9 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC111472494 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39 Identity = 86/125 (68.80%), Postives = 97/125 (77.60%), Query Frame = 0
BLAST of MELO3C029652 vs. TAIR 10
Match: AT4G32270.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 90.5 bits (223), Expect = 9.7e-19 Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of MELO3C029652 vs. TAIR 10
Match: AT5G25340.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 87.8 bits (216), Expect = 6.3e-18 Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of MELO3C029652 vs. TAIR 10
Match: AT1G80060.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17 Identity = 50/114 (43.86%), Postives = 72/114 (63.16%), Query Frame = 0
BLAST of MELO3C029652 vs. TAIR 10
Match: AT4G32270.2 (Ubiquitin-like superfamily protein ) HSP 1 Score: 72.4 bits (176), Expect = 2.7e-13 Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of MELO3C029652 vs. TAIR 10
Match: AT3G07860.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 2.7e-08 Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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