Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAATAAGAGAGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAGGATTTTTGGAGATACTACTACAACAGGTGTAAATGCTTGCCCGTCAACAAGACTTATTTCATATTCTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAATGTTGGTGTTGAAGAGAATGATAAAGGAAAAAGCAAAAAACGAGTTCGAAGAAATAGAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGTAAAGAGAAAGAATGACATCCTTGAGAAAAAATCTTTTGGTTGTACATGTAGTGAAGTTGATGAGAGTCAAACATCAAGTAAAAAAGATGATCTCCATGAAGAGTTGATGGAATGTTTAGACATTTTAAATATAATGGAGGATGTTGATGGAGAGGCTTATTCCAAAATACTGAAACTCTTGCACAGAGATCTTGCTTGGAGAAAGCTATTTTTGCGTATGCCCGATTCAAGGAAGAGAGATTTCATAAATAGTCTTTAGATGTCACTTAGGAATTGTTTTAGGATTATGTCATCTACTTTTTAATATTAGACTTGAACATAGATTTTGTATGTTTGACATTATGGTTTGGGAAAGTTACATAAATTTTCTTTTCTCTTCCATCTTTGTCTGTTTCTTTTCTTCTTATTTTTTTTTCAAACTATTATTTGGTTCATCGTGTATTATTTAGATTGGAGTAGTCAAATGTAAACGATTGTGTAAAAAAAATAAATTATCATGTAGAAAAATCTAAA
mRNA sequence
GTGAATAAGAGAGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAGGATTTTTGGAGATACTACTACAACAGGTGTAAATGCTTGCCCGTCAACAAGACTTATTTCATATTCTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAATGTTGGTGTTGAAGAGAATGATAAAGGAAAAAGCAAAAAACGAGTTCGAAGAAATAGAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGTAAAGAGAAAGAATGACATCCTTGAGAAAAAATCTTTTGGTTGTACATGTAGTGAAGTTGATGAGAGTCAAACATCAAGTAAAAAAGATGATCTCCATGAAGAGTTGATGGAATGTTTAGACATTTTAAATATAATGGAGGATGTTGATGGAGAGGCTTATTCCAAAATACTGAAACTCTTGCACAGAGATCTTGCTTGGAGAAAGCTATTTTTGCGTATGCCCGATTCAAGGAAGAGAGATTTCATAAATAGTCTTTAGATGTCACTTAGGAATTGTTTTAGGATTATGTCATCTACTTTTTAATATTAGACTTGAACATAGATTTTGTATGTTTGACATTATGGTTTGGGAAAGTTACATAAATTTTCTTTTCTCTTCCATCTTTGTCTGTTTCTTTTCTTCTTATTTTTTTTTCAAACTATTATTTGGTTCATCGTGTATTATTTAGATTGGAGTAGTCAAATGTAAACGATTGTGTAAAAAAAATAAATTATCATGTAGAAAAATCTAAA
Coding sequence (CDS)
GTGAATAAGAGAGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAGGATTTTTGGAGATACTACTACAACAGGTGTAAATGCTTGCCCGTCAACAAGACTTATTTCATATTCTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAATGTTGGTGTTGAAGAGAATGATAAAGGAAAAAGCAAAAAACGAGTTCGAAGAAATAGAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGTAAAGAGAAAGAATGACATCCTTGAGAAAAAATCTTTTGGTTGTACATGTAGTGAAGTTGATGAGAGTCAAACATCAAGTAAAAAAGATGATCTCCATGAAGAGTTGATGGAATGTTTAGACATTTTAAATATAATGGAGGATGTTGATGGAGAGGCTTATTCCAAAATACTGAAACTCTTGCACAGAGATCTTGCTTGGAGAAAGCTATTTTTGCGTATGCCCGATTCAAGGAAGAGAGATTTCATAAATAGTCTTTAG
Protein sequence
VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVEENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSKKDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL
Homology
BLAST of MELO3C029648 vs. NCBI nr
Match:
KAA0066986.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86
Identity = 164/178 (92.13%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKR KKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLISYSEDENENDVASNTNVGVE
Sbjct: 26 VNKRTKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISYSEDENENDVASNTNVGVE 85
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +DEFGSFFSSFLDVYAEN KRKN+ILEK+SFGCT S+VDESQTS+K
Sbjct: 86 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNNILEKRSFGCTSSQVDESQTSNK 145
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 146 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHEDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of MELO3C029648 vs. NCBI nr
Match:
TYJ96795.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK00864.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK19200.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 328.9 bits (842), Expect = 2.6e-86
Identity = 165/178 (92.70%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLIS SEDENENDVASNTNVGVE
Sbjct: 26 VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +DEFGSFFSSFLDVYAEN KRKNDILEK+SFGCT S+VDESQTS+K
Sbjct: 86 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNK 145
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 146 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of MELO3C029648 vs. NCBI nr
Match:
TYK21097.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 328.9 bits (842), Expect = 2.6e-86
Identity = 165/178 (92.70%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLIS SEDENENDVASNTNVGVE
Sbjct: 98 VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 157
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +DEFGSFFSSFLDVYAEN KRKNDILEK+SFGCT S+VDESQTS+K
Sbjct: 158 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNK 217
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 218 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 275
BLAST of MELO3C029648 vs. NCBI nr
Match:
TYK06268.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 328.9 bits (842), Expect = 2.6e-86
Identity = 165/178 (92.70%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLIS SEDENENDVASNTNVGVE
Sbjct: 26 VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +DEFGSFFSSFLDVYAEN KRKNDILEK+SFGCT S+VDESQTS+K
Sbjct: 86 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNK 145
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 146 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of MELO3C029648 vs. NCBI nr
Match:
KAA0061221.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 327.4 bits (838), Expect = 7.6e-86
Identity = 164/178 (92.13%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLIS SEDENENDVASNTNVGVE
Sbjct: 26 VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +D+FGSFFSSFLDVYAEN KRKNDILEK+SFGCT S+VDESQTS+K
Sbjct: 86 ENNKGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNK 145
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 146 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of MELO3C029648 vs. ExPASy TrEMBL
Match:
A0A5A7VKM6 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G00100 PE=4 SV=1)
HSP 1 Score: 330.1 bits (845), Expect = 5.7e-87
Identity = 164/178 (92.13%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKR KKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLISYSEDENENDVASNTNVGVE
Sbjct: 26 VNKRTKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISYSEDENENDVASNTNVGVE 85
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +DEFGSFFSSFLDVYAEN KRKN+ILEK+SFGCT S+VDESQTS+K
Sbjct: 86 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNNILEKRSFGCTSSQVDESQTSNK 145
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 146 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHEDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of MELO3C029648 vs. ExPASy TrEMBL
Match:
A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1)
HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 165/178 (92.70%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLIS SEDENENDVASNTNVGVE
Sbjct: 26 VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +DEFGSFFSSFLDVYAEN KRKNDILEK+SFGCT S+VDESQTS+K
Sbjct: 86 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNK 145
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 146 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of MELO3C029648 vs. ExPASy TrEMBL
Match:
A0A5D3DBS2 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00630 PE=4 SV=1)
HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 165/178 (92.70%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLIS SEDENENDVASNTNVGVE
Sbjct: 98 VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 157
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +DEFGSFFSSFLDVYAEN KRKNDILEK+SFGCT S+VDESQTS+K
Sbjct: 158 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNK 217
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 218 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 275
BLAST of MELO3C029648 vs. ExPASy TrEMBL
Match:
A0A5D3C535 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00490 PE=4 SV=1)
HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 165/178 (92.70%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLIS SEDENENDVASNTNVGVE
Sbjct: 26 VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +DEFGSFFSSFLDVYAEN KRKNDILEK+SFGCT S+VDESQTS+K
Sbjct: 86 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNK 145
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 146 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of MELO3C029648 vs. ExPASy TrEMBL
Match:
A0A5A7V5Z1 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00520 PE=4 SV=1)
HSP 1 Score: 327.4 bits (838), Expect = 3.7e-86
Identity = 164/178 (92.13%), Postives = 170/178 (95.51%), Query Frame = 0
Query: 1 VNKRAKKFRKSGCPHYEKLVRIFGDTTTTGVNACPSTRLISYSEDENENDVASNTNVGVE 60
VNKRAKKFRKSGCPHYEKLVRIFGDTT TGVNACPSTRLIS SEDENENDVASNTNVGVE
Sbjct: 26 VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85
Query: 61 ENDKGKSKKRVRRNRDEFGSFFSSFLDVYAENVKRKNDILEKKSFGCTCSEVDESQTSSK 120
EN+KGKSKKR RR +D+FGSFFSSFLDVYAEN KRKNDILEK+SFGCT S+VDESQTS+K
Sbjct: 86 ENNKGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNK 145
Query: 121 KDDLHEELMECLDILNIMEDVDGEAYSKILKLLHRDLAWRKLFLRMPDSRKRDFINSL 179
KDDLHEELMECLDILN MEDVDGEAYSKILKLLH DLAWRKLFLRMPDSRKRDFINSL
Sbjct: 146 KDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0066986.1 | 1.2e-86 | 92.13 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] | [more] |
TYJ96795.1 | 2.6e-86 | 92.70 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T... | [more] |
TYK21097.1 | 2.6e-86 | 92.70 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] | [more] |
TYK06268.1 | 2.6e-86 | 92.70 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] | [more] |
KAA0061221.1 | 7.6e-86 | 92.13 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VKM6 | 5.7e-87 | 92.13 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
A0A5D3BNQ5 | 1.3e-86 | 92.70 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
A0A5D3DBS2 | 1.3e-86 | 92.70 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
A0A5D3C535 | 1.3e-86 | 92.70 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
A0A5A7V5Z1 | 3.7e-86 | 92.13 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
Match Name | E-value | Identity | Description | |