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MELO3C029636 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCAATTTCTTTACATATTTGTAATATTAATTCAAATTTATTTTCATATAATAATACTTCGATAAGCCTAAGAACAAGCAAATACATTTGCATCATTTTTAATAGCAAGGTCAAGGGCGAAGACATGTAGGGGCAAGAAGCATTTGTCCCCTTGATTGGTTTAAATTACTTAAATATATTCATTTACATCTAAATATATTTACTATGGCATTTTATATTAACGTCGAAAAGAGTCCTTTGGTGCAGCGGTTGATGGCCCTTCAAACTTATTGTTGTCGCCTTGTGTTGGGAGTTCAAATAGTGTAAGACACCTTTGGCTTTTTTCCCTCTTTTTCTTATCTTTAATGAAACTTTAGCTCTAGCAAGTCATGATCAAGAAACCATCAATTTGTTTGGTAGGTCAAGAATGCCCAACTTATCAAATTATTTGATAAACCATCGAGGGCTCATGGAGCTCATGTCATATTAATCATATTCTCGGTTAGAGCAATTAACCTATTTGAAGTGGCTCAATTTGTACCGGAGAAGCCCATGTATGAACAAGTATTAATTTTACTTCCCCTTAACTACTTTAGGTTAGCGGTAGGCCCTAGTGGATAGGTTATAGACATTTTTCCTTACTTTATGTTTGGAGTGCTTAAGTAATATTCTTTGCAAGATTGGGTTTTTGCAGTATTTATCATGCACTTTTAGGACTCGAGACCCTTGAAGAATATGTTCCATTCTTTAGTTATGTGTATAAAGATATAAATAAAATGACTAGCATTTTGAGTATTCACTTAATTTTATTATGTATAGGTGGTTTTTTTCTAATATTCAAAGTTCTTTCTTTTGAGGGCGTGTATGATACTTGGGCTCAGGGGGTGAGAAGATGCAAGAAAAATTATCAACCTGGCCCTTAGCCCAAGTTATTTGGTTATTTACTAAAATCTCCTTTTGGAAAAGAATGATGGATTGTTAGTATGGGTGATTTTTGAAGATATAGTGGGGACATATATGGTTAGATTCCATTTGTATATTTGGTGGAATTTAGCCTGAGTTCCTAAACCATTTGCATGAGCTTCCTATGCACTTCTTGATAGGAAGAATCTTACTTTTCTTTAGAGTTTAGGTGTTCTATCAGATTTTTGCTTTATTGCTTGCTTTTTTGTCTGGCTCAAGTTCCTTGGTTAGAACAACTGGTCCTAATGGTTTAAACTTCAGTAGATTGAAAAAATATGTAATAGTATCGAAAAGAGTTCTTTAG TTCAATTTCTTTACATATTTGTAATATTAATTCAAATTTATTTTCATATAATAATACTTCGATAAGCCTAAGAACAAGCAAATACATTTGCATCATTTTTAATAGCAAGGTCAAGGGCGAAGACATGTAGGGGCAAGAAGCATTTGTCCCCTTGATTGGTTTAAATTACTTAAATATATTCATTTACATCTAAATATATTTACTATGGCATTTTATATTAACGTCGAAAAGAGTCCTTTGGTGCAGCGGTTGATGGCCCTTCAAACTTATTGTTGTCGCCTTGTGTTGGGAGTTCAAATAGTCAAGAATGCCCAACTTATCAAATTATTTGATAAACCATCGAGGGCTCATGGAGCTCATGTCATATTAATCATATTCTCGGTTAGAGCAATTAACCTATTTGAAGTGGCTCAATTTGTACCGGAGAAGCCCATGTATGAACAAGTGTTCTATCAGATTTTTGCTTTATTGCTTGCTTTTTTGTCTGGCTCAAGTTCCTTGGTTAGAACAACTGGTCCTAATGGTTTAAACTTCAGTAGATTGAAAAAATATGTAATAGTATCGAAAAGAGTTCTTTAG ATGGCATTTTATATTAACGTCGAAAAGAGTCCTTTGGTGCAGCGGTTGATGGCCCTTCAAACTTATTGTTGTCGCCTTGTGTTGGGAGTTCAAATAGTCAAGAATGCCCAACTTATCAAATTATTTGATAAACCATCGAGGGCTCATGGAGCTCATGTCATATTAATCATATTCTCGGTTAGAGCAATTAACCTATTTGAAGTGGCTCAATTTGTACCGGAGAAGCCCATGTATGAACAAGTGTTCTATCAGATTTTTGCTTTATTGCTTGCTTTTTTGTCTGGCTCAAGTTCCTTGGTTAGAACAACTGGTCCTAATGGTTTAAACTTCAGTAGATTGAAAAAATATGTAATAGTATCGAAAAGAGTTCTTTAG MAFYINVEKSPLVQRLMALQTYCCRLVLGVQIVKNAQLIKLFDKPSRAHGAHVILIIFSVRAINLFEVAQFVPEKPMYEQVFYQIFALLLAFLSGSSSLVRTTGPNGLNFSRLKKYVIVSKRVL Homology
BLAST of MELO3C029636 vs. NCBI nr
Match: KAF9603051.1 (hypothetical protein IFM89_033776 [Coptis chinensis]) HSP 1 Score: 62.0 bits (149), Expect = 4.2e-06 Identity = 38/70 (54.29%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of MELO3C029636 vs. NCBI nr
Match: VDC96199.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 61.2 bits (147), Expect = 7.1e-06 Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of MELO3C029636 vs. NCBI nr
Match: YP_009519604.1 (photosystem II CP43 chlorophyll apoprotein [Udotea argentea] >AYC65548.1 photosystem II CP43 chlorophyll apoprotein [Udotea argentea]) HSP 1 Score: 61.2 bits (147), Expect = 7.1e-06 Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of MELO3C029636 vs. NCBI nr
Match: KAF0925994.1 (hypothetical protein E2562_019937, partial [Oryza meyeriana var. granulata]) HSP 1 Score: 60.8 bits (146), Expect = 9.3e-06 Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of MELO3C029636 vs. NCBI nr
Match: KAG6540470.1 (hypothetical protein Mapa_018154 [Marchantia paleacea]) HSP 1 Score: 60.8 bits (146), Expect = 9.3e-06 Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy Swiss-Prot
Match: Q20EU6 (Photosystem II CP43 reaction center protein OS=Oltmannsiellopsis viridis OX=51324 GN=psbC PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08 Identity = 37/73 (50.68%), Postives = 41/73 (56.16%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy Swiss-Prot
Match: Q06FW0 (Photosystem II CP43 reaction center protein OS=Pelargonium hortorum OX=4031 GN=psbC PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08 Identity = 31/48 (64.58%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy Swiss-Prot
Match: B2LMI9 (Photosystem II CP43 reaction center protein OS=Guizotia abyssinica OX=4230 GN=psbC PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.9e-08 Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy Swiss-Prot
Match: Q3ZJ43 (Photosystem II CP43 reaction center protein OS=Tupiella akineta OX=160070 GN=psbC PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.9e-08 Identity = 36/73 (49.32%), Postives = 41/73 (56.16%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy Swiss-Prot
Match: Q8HB52 (Photosystem II CP43 reaction center protein OS=Abies alba OX=45372 GN=psbC PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.0e-07 Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy TrEMBL
Match: A0A386B1N1 (Photosystem II CP43 reaction center protein OS=Udotea argentea OX=189445 GN=psbC PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.4e-06 Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy TrEMBL
Match: A0A3P6B565 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA07T28398Z PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.4e-06 Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy TrEMBL
Match: A0A6G1EMZ3 (Uncharacterized protein (Fragment) OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_019937 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.5e-06 Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy TrEMBL
Match: W6CL67 (Photosystem II CP43 reaction center protein OS=Chionographis japonica OX=119999 GN=psbC PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.5e-06 Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of MELO3C029636 vs. ExPASy TrEMBL
Match: A0A5D2BJX6 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D08G144700v1 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 5.9e-06 Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of MELO3C029636 vs. TAIR 10
Match: ATCG00280.1 (photosystem II reaction center protein C ) HSP 1 Score: 57.8 bits (138), Expect = 7.3e-09 Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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