Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCATGTGACTTCGCGGAGCTTTTCATTGATTACATGACTGAGATATTGAGCCTGAAGCTATATGGTACCGTGTGCACACAGTTTATATTTCTGTTGTCGAATTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGATGGACGGGCCCACTATGACAAAGACGATGGGAGTGTCGGGTGGACCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCTCTACACCACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGTTATGCTTTGTTAGATTTTTTTTTTATGATGAACTTGGAAGATATTTTAGGAAACCTTATTTATTACACATTTATGTTAAATGCTTTATTTGAGCATATTTATATGTCTAAAGGTTTATCACATGTTCTTACGTCCGAATTTAGAGTTTTAAATTTAGTCACTCACTGGGCCTTGTAGCTCATTCTTTTCAAAATGTTTCCCACTTTTCAGGTAGAGATTGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCGGATCAAACTCTAGTACATGGTTGGAGTTGTATTTTGAGTCTGTTCATGTTGCAATATTTTGTAAGGTTTGTATAATATCGTCTTAGAGGTCGTGGTCATAAAACTCTAGTTGTATAGGTTTTGGTCGTGATGTTTATATCAGGTTATTTGACAAACCAAGTGATGTCAGGGCTGCATCCTATGTATGTTGGAAAGGTTTTCGTGGTTTCCTCTGTGTGGTGTTCCATGTTGAATATTCTAAATCTAAGATTGGTATGTTTATCGGGCTTAACGTTCAGTAGGGTCAGCAGGGATCGTTAGAGGAGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGACAGCAGATGGTCCGGGAGGGGG
mRNA sequence
ATGTTTTCATGTGACTTCGCGGAGCTTTTCATTGATTACATGACTGAGATATTGAGCCTGAAGCTATATGGTACCGTGTGCACACAGTTTATATTTCTGTTGTCGAATTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGATGGACGGGCCCACTATGACAAAGACGATGGGAGTGTCGGGTGGACCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCTCTACACCACGTAGATCGGTAGAGATTGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCGGATCAAACTCTAGTACATGGTTGGAGTTGTATTTTGAGTCTGTTCATGTTGCAATATTTTGTAAGGGTCAGCAGGGATCGTTAGAGGAGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGACAGCAGATGGTCCGGGAGGGGG
Coding sequence (CDS)
ATGTTTTCATGTGACTTCGCGGAGCTTTTCATTGATTACATGACTGAGATATTGAGCCTGAAGCTATATGGTACCGTGTGCACACAGTTTATATTTCTGTTGTCGAATTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGATGGACGGGCCCACTATGACAAAGACGATGGGAGTGTCGGGTGGACCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCTCTACACCACGTAGATCGGTAGAGATTGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCGGATCAAACTCTAGTACATGGTTGGAGTTGTATTTTGAGTCTGTTCATGTTGCAATATTTTGTAAGGGTCAGCAGGGATCGTTAGAGGAGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGACAGCAGATGGTCCGGGAGGGG
Protein sequence
MFSCDFAELFIDYMTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHRRTSKRWLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFCKGQQGSLEETMSVGFTPSFGLRQQMVREG
Homology
BLAST of MELO3C029621 vs. NCBI nr
Match:
TYK27997.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])
HSP 1 Score: 139.8 bits (351), Expect = 1.9e-29
Identity = 87/161 (54.04%), Postives = 92/161 (57.14%), Query Frame = 0
Query: 9 LFIDYMTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHR 68
L IDYMTEILSL+ YGTVCTQ IF LS LSVLRDNDAV
Sbjct: 204 LSIDYMTEILSLRPYGTVCTQVIFPLSTLSVLRDNDAV---------------------- 263
Query: 69 RTSKRWLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFC---- 128
VEIELPVPDTLP+S ES SNSSTWLELYFE VHV +FC
Sbjct: 264 -----------------VEIELPVPDTLPSSTESFESNSSTWLELYFEFVHVEMFCYFTN 323
Query: 129 ------------KGQQGSLEETMSVGFTPSFGLRQQMVREG 154
K QQGSLEETMSVGFT SFGLRQQ+ + G
Sbjct: 324 QVMSGLHLMYVGKDQQGSLEETMSVGFTSSFGLRQQVGKRG 325
BLAST of MELO3C029621 vs. NCBI nr
Match:
KAA0066850.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])
HSP 1 Score: 139.8 bits (351), Expect = 1.9e-29
Identity = 87/161 (54.04%), Postives = 92/161 (57.14%), Query Frame = 0
Query: 9 LFIDYMTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHR 68
L IDYMTEILSL+ YGTVCTQ IF LS LSVLRDNDAV
Sbjct: 218 LSIDYMTEILSLRPYGTVCTQVIFPLSTLSVLRDNDAV---------------------- 277
Query: 69 RTSKRWLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFC---- 128
VEIELPVPDTLP+S ES SNSSTWLELYFE VHV +FC
Sbjct: 278 -----------------VEIELPVPDTLPSSTESFESNSSTWLELYFEFVHVEMFCYFTN 337
Query: 129 ------------KGQQGSLEETMSVGFTPSFGLRQQMVREG 154
K QQGSLEETMSVGFT SFGLRQQ+ + G
Sbjct: 338 QVMSGLHLMYVGKDQQGSLEETMSVGFTSSFGLRQQVGKRG 339
BLAST of MELO3C029621 vs. NCBI nr
Match:
KAA0041121.1 (hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa])
HSP 1 Score: 136.0 bits (341), Expect = 2.8e-28
Identity = 91/186 (48.92%), Postives = 94/186 (50.54%), Query Frame = 0
Query: 11 IDYMTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHRRT 70
IDYMTEILSL+LYGTVCT IF LS LSVLRDND V
Sbjct: 93 IDYMTEILSLRLYGTVCTHVIFQLSTLSVLRDNDVV------------------------ 152
Query: 71 SKRWLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHV-AIFCK---- 130
VEIELPVPD LPTSAESS SNSSTWLELYFESVHV +F K
Sbjct: 153 ---------------VEIELPVPDRLPTSAESSASNSSTWLELYFESVHVEMLFYKPSDV 212
Query: 131 --------------------------------------GQQGSLEETMSVGFTPSFGLRQ 154
GQQGSLEETMSV FTPSFGLRQ
Sbjct: 213 RIVSRVCWEGFRGFLCVVFHVEYSISKIGMFIGFNVQYGQQGSLEETMSVSFTPSFGLRQ 239
BLAST of MELO3C029621 vs. NCBI nr
Match:
TYK21916.1 (hypothetical protein E5676_scaffold494G00570 [Cucumis melo var. makuwa])
HSP 1 Score: 132.5 bits (332), Expect = 3.1e-27
Identity = 79/143 (55.24%), Postives = 85/143 (59.44%), Query Frame = 0
Query: 11 IDYMTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHRRT 70
IDYMTEILSL+LYGTVCT IF LS LSVLRDNDAV
Sbjct: 93 IDYMTEILSLRLYGTVCTHVIFSLSTLSVLRDNDAV------------------------ 152
Query: 71 SKRWLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFCKGQQGS 130
VEIELPVPD LPTSAESS SNSS + +++ KGQQGS
Sbjct: 153 ---------------VEIELPVPDRLPTSAESSASNSSYFTNQVMSGLYLVYVGKGQQGS 196
Query: 131 LEETMSVGFTPSFGLRQQMVREG 154
LEETMSV FTPSFGLRQQ+VREG
Sbjct: 213 LEETMSVSFTPSFGLRQQVVREG 196
BLAST of MELO3C029621 vs. NCBI nr
Match:
KAA0051940.1 (hypothetical protein E6C27_scaffold60G003970 [Cucumis melo var. makuwa])
HSP 1 Score: 131.3 bits (329), Expect = 6.9e-27
Identity = 79/140 (56.43%), Postives = 85/140 (60.71%), Query Frame = 0
Query: 14 MTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHRRTSKR 73
MTEILSL+LYGTVCTQ IF LS LSVLRDNDAV
Sbjct: 1 MTEILSLRLYGTVCTQVIFPLSTLSVLRDNDAV--------------------------- 60
Query: 74 WLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFCKGQQGSLEE 133
VEIEL VPDTLPTSAESSGSNSS + +H+ KGQQGSLEE
Sbjct: 61 ------------VEIELLVPDTLPTSAESSGSNSSYFTNQVISGLHLVNVGKGQQGSLEE 101
Query: 134 TMSVGFTPSFGLRQQMVREG 154
TMSVGFTPSFGL+QQ+VREG
Sbjct: 121 TMSVGFTPSFGLKQQVVREG 101
BLAST of MELO3C029621 vs. ExPASy TrEMBL
Match:
A0A5A7VI26 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002210 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 9.4e-30
Identity = 87/161 (54.04%), Postives = 92/161 (57.14%), Query Frame = 0
Query: 9 LFIDYMTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHR 68
L IDYMTEILSL+ YGTVCTQ IF LS LSVLRDNDAV
Sbjct: 218 LSIDYMTEILSLRPYGTVCTQVIFPLSTLSVLRDNDAV---------------------- 277
Query: 69 RTSKRWLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFC---- 128
VEIELPVPDTLP+S ES SNSSTWLELYFE VHV +FC
Sbjct: 278 -----------------VEIELPVPDTLPSSTESFESNSSTWLELYFEFVHVEMFCYFTN 337
Query: 129 ------------KGQQGSLEETMSVGFTPSFGLRQQMVREG 154
K QQGSLEETMSVGFT SFGLRQQ+ + G
Sbjct: 338 QVMSGLHLMYVGKDQQGSLEETMSVGFTSSFGLRQQVGKRG 339
BLAST of MELO3C029621 vs. ExPASy TrEMBL
Match:
A0A5D3DW05 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002130 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 9.4e-30
Identity = 87/161 (54.04%), Postives = 92/161 (57.14%), Query Frame = 0
Query: 9 LFIDYMTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHR 68
L IDYMTEILSL+ YGTVCTQ IF LS LSVLRDNDAV
Sbjct: 204 LSIDYMTEILSLRPYGTVCTQVIFPLSTLSVLRDNDAV---------------------- 263
Query: 69 RTSKRWLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFC---- 128
VEIELPVPDTLP+S ES SNSSTWLELYFE VHV +FC
Sbjct: 264 -----------------VEIELPVPDTLPSSTESFESNSSTWLELYFEFVHVEMFCYFTN 323
Query: 129 ------------KGQQGSLEETMSVGFTPSFGLRQQMVREG 154
K QQGSLEETMSVGFT SFGLRQQ+ + G
Sbjct: 324 QVMSGLHLMYVGKDQQGSLEETMSVGFTSSFGLRQQVGKRG 325
BLAST of MELO3C029621 vs. ExPASy TrEMBL
Match:
A0A5A7THH5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00290 PE=4 SV=1)
HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28
Identity = 91/186 (48.92%), Postives = 94/186 (50.54%), Query Frame = 0
Query: 11 IDYMTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHRRT 70
IDYMTEILSL+LYGTVCT IF LS LSVLRDND V
Sbjct: 93 IDYMTEILSLRLYGTVCTHVIFQLSTLSVLRDNDVV------------------------ 152
Query: 71 SKRWLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHV-AIFCK---- 130
VEIELPVPD LPTSAESS SNSSTWLELYFESVHV +F K
Sbjct: 153 ---------------VEIELPVPDRLPTSAESSASNSSTWLELYFESVHVEMLFYKPSDV 212
Query: 131 --------------------------------------GQQGSLEETMSVGFTPSFGLRQ 154
GQQGSLEETMSV FTPSFGLRQ
Sbjct: 213 RIVSRVCWEGFRGFLCVVFHVEYSISKIGMFIGFNVQYGQQGSLEETMSVSFTPSFGLRQ 239
BLAST of MELO3C029621 vs. ExPASy TrEMBL
Match:
A0A5D3DE96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold494G00570 PE=4 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27
Identity = 79/143 (55.24%), Postives = 85/143 (59.44%), Query Frame = 0
Query: 11 IDYMTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHRRT 70
IDYMTEILSL+LYGTVCT IF LS LSVLRDNDAV
Sbjct: 93 IDYMTEILSLRLYGTVCTHVIFSLSTLSVLRDNDAV------------------------ 152
Query: 71 SKRWLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFCKGQQGS 130
VEIELPVPD LPTSAESS SNSS + +++ KGQQGS
Sbjct: 153 ---------------VEIELPVPDRLPTSAESSASNSSYFTNQVMSGLYLVYVGKGQQGS 196
Query: 131 LEETMSVGFTPSFGLRQQMVREG 154
LEETMSV FTPSFGLRQQ+VREG
Sbjct: 213 LEETMSVSFTPSFGLRQQVVREG 196
BLAST of MELO3C029621 vs. ExPASy TrEMBL
Match:
A0A5A7U9T8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G003970 PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 3.3e-27
Identity = 79/140 (56.43%), Postives = 85/140 (60.71%), Query Frame = 0
Query: 14 MTEILSLKLYGTVCTQFIFLLSNLSVLRDNDAVVSDGRAHYDKDDGSVGWTPLHRRTSKR 73
MTEILSL+LYGTVCTQ IF LS LSVLRDNDAV
Sbjct: 1 MTEILSLRLYGTVCTQVIFPLSTLSVLRDNDAV--------------------------- 60
Query: 74 WLYWACSTPRRSVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHVAIFCKGQQGSLEE 133
VEIEL VPDTLPTSAESSGSNSS + +H+ KGQQGSLEE
Sbjct: 61 ------------VEIELLVPDTLPTSAESSGSNSSYFTNQVISGLHLVNVGKGQQGSLEE 101
Query: 134 TMSVGFTPSFGLRQQMVREG 154
TMSVGFTPSFGL+QQ+VREG
Sbjct: 121 TMSVGFTPSFGLKQQVVREG 101
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK27997.1 | 1.9e-29 | 54.04 | putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | [more] |
KAA0066850.1 | 1.9e-29 | 54.04 | putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | [more] |
KAA0041121.1 | 2.8e-28 | 48.92 | hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa] | [more] |
TYK21916.1 | 3.1e-27 | 55.24 | hypothetical protein E5676_scaffold494G00570 [Cucumis melo var. makuwa] | [more] |
KAA0051940.1 | 6.9e-27 | 56.43 | hypothetical protein E6C27_scaffold60G003970 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VI26 | 9.4e-30 | 54.04 | Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=... | [more] |
A0A5D3DW05 | 9.4e-30 | 54.04 | Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=... | [more] |
A0A5A7THH5 | 1.4e-28 | 48.92 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3DE96 | 1.5e-27 | 55.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7U9T8 | 3.3e-27 | 56.43 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |