MELO3C029494.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C029494.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTransposon Tf2-1 polyprotein isoform X1
Locationchr02: 18657975 .. 18663493 (+)
RNA-Seq ExpressionMELO3C029494.jh1
SyntenyMELO3C029494.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACAGAAAGGGATAAATTAGTAACTATTCTACAGGAACAGACAACAAATTGGTGAAAATTAGAAGTGAAGCATGAATGCTACTATGATTTTGTTAGACCGCCCATCATACACACTTATGCTAGGAGGGGTAGTCTGGGAAATTCACATACCTAGAGTAAATGGAGTTGGGTGACGTATTTGGTGTTATATAAATATAGTTATATACTACTTTTGTATGTTCTGGACATAGATTATGTTTTGATATTAAACTTGCTGGAGAGTGACTCCTCGAAAGGCCAATGTATGTTGTTCTCAGTAAATCAAGGTGCTAAACTCTCAGTAGAGTGCTGTTACATTGATGTCAGAGCGTTCATCCTGGTTAAATTTGAGAAGATGCAGCCGAAGAAACATGAGGAGAAAGGAAAGGATTCCGACCAGATGTGACTGATGTTCAGAAGGGATCGGATGTGTCCATGAAGGAACTGGCAGAGAAGGTTAATTTGATGATGCAGCAAATGGATGAGCAATCGGTTGAGAATTAGAAAAGCATAGAGTTGATGTTCCATAACTTTGAGGACCAGAGGAGTGCAAGGAAACTCGCAGGGCAATCGCAGGGCAATCGCAGGGCAATCTCTGCCTTATCTCGGGGAGCCTCAATTCAAAGTATGGAGGAAATAATTACCCACCCAAAACTGAAGTACCCAGAAGGATTTGGGGAGTCTCTAGTGGAGAACATGAATGACGAAGGAGGACAACGTGTGAAAACAGAGGAAGGGTATGCCAATTGGAGTAGGTTTAGGTGGGTGGAGATGCCGATGTTTGACAGCTGTCAACCTGACTCTTGGATATTCAGGGCAGAAAGGTATTTTCATATTTATCAGCTTTCAAATTCGGAAAAGATTATGGTGGCTTCCATCAGTTTTACAGGCGCAGCCTTACATTGGTATCAATGGGCGGATAACCACCAAACGTTTGAATATTGGAAGGATCTGAAGCTCCGGCTACTTTACTGATTTCGACCAACACAGGAAGGTTCCCTATGCGCACGTTTCTTAGCCGTCAAGCAAGAAACAGTCACCGACTTCCATTAGCGTTTTGAGGCTCTATCCGCCCTGTTACCTCACCTCTCTGACAAAGTACTTGAAAGCACTTTCCTGAACGGGTTAGATGCAGAGATCAGGGCTGAAGTTGTTTGCTTTGAGCTGGTTGGATCGGGCCAGATCATGCGAGCAGCCCAGAGAGTTGAAGATAAAAAGGCAGCGCAGAAAAATAGAATGGGCCCATACAAATACACTAAAGCCTTCCAGCCCATCCAATTAGGCCTAGAAAATCCAGGTGTCATGCCAGCAAAGGCCATTGAGGCAGTGCCCATCCGTTCCATCACCCTGCCAAACGCAATTCAGTCAGTGTGAAAAGACACTCCAATTAAACCTTTGTCGAACTCCGAACTACAAGCACGAAAACCGAAAGGTCTATGTTACCGTTGCAACGAGATGTACATCGTGGGACACCCTTGTAAAGGTAAAGAGATGCTGCTACTCATGGTGGACAACGAGATGCTAGAAGAGATTGATGACATGACCATGGATACTGTTCCATCAAAGGAGGAAACAACAGAAGTTGCAAAACTATCTCTTAATACTATGGTGGGTACCCTAACCCCGACACCCTGAAGGTTGAAAGAAAAATCGAAATGGAAGAAGTGAAGTTGTGGGTAGCTTCGCAGTCCACAAGAACCACAACTTCATAGCTCCTCGGATAGTAGAAAATTTGAAATTACCACTAACCGATACCACCAAATACGAGGTAATCATGGGAACGAGTTTGACAGTGCGCAGAAAAGGGATATATAAAAATGTGGTGGTCTCGCTAGAGACATCACTATTGAGGAAGACTTCTTACCATTAGAACTTAGAGGGGTCGATCTGATCCTTGGAATGCAATGGCTAAGAACATTGGATGTGACGGAGGTTGGTTCAAAAAATCTAACCCTGTCCATTGAGGTGGGCGGAAAGCGGATAATCATCAAAGGAAACCCTATTCTCTTGAGGAGAGAAATAATGCTTAAGATGCAAAGGACTTGGGATAAAACCGATCGGGTCTATTTTGTGGTGTTGCGTGCAATCATGGCGGAGATGCAAACAGAAGAGGGTAAAAGGGAAACCACTAGCTTTACTATGTGGGGTAGCCGATACAAGGATTAATTGAGCATTTCAGGGAAACTTTTGAATCGTCTGACCGATTACGCCACACAGAGAAGCTGACCACCAAATCGTTCTCAAGGATGATCGGGAAATAGTGGACCAACGACTCTCTCACCACTCATCATATCAGAAAGAAGAAATTGAGAGGCTAGTAACAGAAATGCTTCACGCAGGGATCATAAGGCCTAGCCATGGACCCTATGCTAGTCCGGTCCTTATGTTTAAGAAGAAAGACTGGAGTTGGCGATTCTGTGTTACAAAGGATTGAATGAGTTAACTGTGTCAAATAAGTACCCCATTCCAGTCATCAAAGAACTGTTGGATGAGCAGTTTGGGCCAAAGATCTTCACCAAGCTAGATCTTTGTTCAAGCTAGCACCAAATCCGTTTTCACGAAGTAGATATTCCAAAAATGGTGTTTCGTACTTATGATGGGCACTACAAGTTTCTAGTCATGTCGTTTGGACTCAAGAATGCTCCAGCTACCTTCCAATTGCTAATCAACAAGGTTTTCATATATTTCCTAATGAAACTTTTCCTAATCTTTGTTGATGACATCCTTATCTACGGCACAGATTTAAAATCTCATCTCAATCTCTTGACCCTAGTTTCTAAACTTTTGCGAAGCAATTCACTATATGCAAATTTCAAGAAGTGTCGTTTTGCTCATAGTCGTCTAGAATACTTAGGCCATTGGGTGTTGGCAAAAGGAGTTGAACCCAATCTAGAAAAGGTACGGGCAATATTGGAATGGCACCAACCCACCAAAGTTCAAGAATTACAAAGTTTTCTTGAGCTGACTAGCTCGGTTTGTAGTAGGTTATGGACAGATAGCACAACGATTACATCGAATGATGGGAACGGATGCTTTTGTTTGGTCGGAGGAGTCTGTCGAAGCATTCGTGCAATTGAAGTGGGTCATGGTAACATTACTTGAATTAGCTTTGCCTGATATTTCCATCACTTTCATTGTTGAGACTGATGCATGGGGTAGGAGTGGTTTTAACTCGAGGGCAGAGGCCCATTGCCTTTTTCAGCAAGGTTCTCTCTCTCCACACACAAGCGAAATCTGCTTATGAGAGGGAGCTTATTGCTATTGTAATAGTTGTCCAACATTGGCGTTCTTATCTATTGGGACAACGATTTATGGTAAGAACCGACCAGCAATCTTTAAAATATATCGTTGAGCGAACAGTGATCCAACTGGAGTATCATATTTGGGTATCCAAGCTTCTCGACTATGATTTTGAAGTGCAACGCAAACCTGACGCTTAGAATAATGTTGCCAATGCCTTATCATGCATGCGACCACATGTGTATTTAGCAAATTTGACAGCACTAGCCATTCTCAATGTGGATGTCATCTGTGATGAGGTTACATCCAACGTCTATCTCCGGCAAATAAGGAAAGATTTGGAGGTCATTTCGGATCGTGACCCAGGCTTCTCAATGGTTCAAGGCAATTTTCTATACAAAGACAAACTAGTCCTATCTGCCCATTCCTCCCTGATTCCCACAATCCTTCACACGTATTTTAGAGGTCATTCTGGTTATCTGAGAATGTACAAGAGGATTTCTAGCAAATTGTACTGGCGGGTATGAAAACTCTGATTAAGCAATATGTATCAGGATGTGATACGTGCCAAAGGAACAAAGCTAGCACTTAAGCAACCGTCGTCCTGCTACAACCCCTGCCTGTTCCAGATCAGATTTTGGAGGATTTCTCCATGGATTTTATCGAGAAACTGCCACGTTCACAAGGGTGTGACAGCATCTTGGTGATATTTGACCGACTGAGTAAGTATGCCAGGTTCTTACCCTGGAGTCACCCTCATATAGCAAAAACAGTGGCCTAGTTGTTCGCTAAGGAAGTTGTACATGACTTCGGGTTTCCCAAATCTATTGGCCCATACCAAAAGTATTTATCAGTAAATTTTGGGGTGAAATGTTTCACTAACAGGGAACTCAGCTACGGAGAAGCACGACTTATCACCCACAGATGGATGGATATACAGAAATCGTGAATAAGAGTGTGGAGACGTATTTGCGTTGCTTATGTGGTGAAAAACCAAAGAAATGGATGGAATGGGTGGATTGGGTCGAGCACTAGTATAACACTTCCTATCATGCCATTTTAAAATCCACTTCCTACCAAGTTGTGTTTGGCCAACCACACCAGCCCTCACTTTTTATGGAAGCCAAAAAACTTCCAATGCCACCCTTGATGAACAATTGCTAGAACAAGACAAGGTGCCACATGAGCTAAAGTATCACCTAGAGAGGGCTCAAGAACGAATGAAACAATACGCTGACCGCCACCGCCGTGAAGAGTATATCGTGGATGATTGGGTGTATTTAAAATTAAAACCTTACCGACTGCAGACAGTGGCGCGGCGGTATAGCGAGAAATTATCCCCTAAATATTTTGGACCCTACCAGATTGAAGAAAAGATCGGGTCCATAGCTTATCGTCTCGCATTACCATCAACAGCAGCTATCCATTCTGTATTTCATGTCTCTCAACTAAAACAAGTTCTCTGTAGCGCAACTCTTGTTGAATCTTTGCCCCCTTCCTTTACCGATGACTTTGAATGGGAAGCCATACTGGAAGTGATAACTTGTAGAAATACAATTTATTATGGCCTTCTAAGTAGAATAATGAAGCCTTAACGTGAGAAAAAAGGAAGAAAACGCGTAGCAAAATAGACAAAATAGGATAATTACGCGTTACAAGCATCAAAAGAGTAAAACACTTGTTTATCACGATTTTCATTTCATGTCTTAATGCAGGTTTTTAAGCGAAAGAAAGAGTAGTAGCGACGCGAAAAACTTCAGGCGAATAGGGCATACGTCAACTAGGCGACAAGAGGAAGGATGCTAGGCGATCTACATTGCTAGAAGACAAAAATGGATGGCGTGGATGTCAGAAAAGGACGAAAAGACGTCTACGGCAACATGCAGCAATGTCATAGAATTAATGACATCCATACTATGTTAAGTCCCATCGGCCCTCGCCTATAAATACAAGGCTATCTCCTCCAAACAAATTGCGTGAAATTTGTGGAGAACAAGCTTAACTTTATCTCTTACCTTTCTTCTCCACTTTAGCTGAGAACTTAGAGGAGAGTCGAGAGAAGTCCAAACCCCATTTTCCCCCTCAGTTGTAATCGGCAAAAATAGAGCCAATGAGCATAAGAAATTGTGTTCAGAGGCTCGACTCATTTCTTGTAACTTTCATCTGTATTTTCTATTTATTTGTGTTTGTAATCTGAACCTCATGGCCAAAAGGTATAAAGTTTTCTGTATGAATGCAAAACATTACTATTTCCACGCA

mRNA sequence

AGAACAGAAAGGGATAAATTAGTAACTATTCTACAGGAACAGACAACAAATTGGTGAAAATTAGAAGTGAAGCATGAATGCTACTATGATTTTGTTAGACCGCCCATCATACACACTTATGCTAGGAGGGGTAGTCTGGGAAATTCACATACCTAGAGTAAATGGAGTTGGGTGACGTATTTGGTGTTATATAAATATAGTTATATACTACTTTTGTATGTTCTGGACATAGATTATGTTTTGATATTAAACTTGCTGGAGAGTGACTCCTCGAAAGGCCAATGTATGTTGTTCTCAGTAAATCAAGGTGCTAAACTCTCAGTAGAGTGCTGTTACATTGATGTCAGAGCGTTCATCCTGGTTAAATTTGAGAAGATGCAGCCGAAGAAACATGAGGAGAAAGGAAAGGATTCCGACCAGATGTGACTGATGTTCAGAAGGGATCGGATGTGTCCATGAAGGAACTGGCAGAGAAGGTTAATTTGATGATGCAGCAAATGGATGAGCAATCGGTTGAGAATTAGAAAAGCATAGAGTTGATGTTCCATAACTTTGAGGACCAGAGGAGTGCAAGGAAACTCGCAGGGCAATCGCAGGGCAATCGCAGGGCAATCTCTGCCTTATCTCGGGGAGCCTCAATTCAAAGTATGGAGGAAATAATTACCCACCCAAAACTGAAGTACCCAGAAGGATTTGGGGAGTCTCTAGTGGAGAACATGAATGACGAAGGAGGACAACGTGTGAAAACAGAGGAAGGGTATGCCAATTGGAGTAGGTTTAGGTGGGTGGAGATGCCGATGTTTGACAGCTGTCAACCTGACTCTTGGATATTCAGGGCAGAAAGGTTTTTAAGCGAAAGAAAGAGTAGTAGCGACGCGAAAAACTTCAGGCGAATAGGGCATACGTCAACTAGGCGACAAGAGGAAGGATGCTAGGCGATCTACATTGCTAGAAGACAAAAATGGATGGCGTGGATGTCAGAAAAGGACGAAAAGACGTCTACGGCAACATGCAGCAATGTCATAGAATTAATGACATCCATACTATGTTAAGTCCCATCGGCCCTCGCCTATAAATACAAGGCTATCTCCTCCAAACAAATTGCGTGAAATTTGTGGAGAACAAGCTTAACTTTATCTCTTACCTTTCTTCTCCACTTTAGCTGAGAACTTAGAGGAGAGTCGAGAGAAGTCCAAACCCCATTTTCCCCCTCAGTTGTAATCGGCAAAAATAGAGCCAATGAGCATAAGAAATTGTGTTCAGAGGCTCGACTCATTTCTTGTAACTTTCATCTGTATTTTCTATTTATTTGTGTTTGTAATCTGAACCTCATGGCCAAAAGGTATAAAGTTTTCTGTATGAATGCAAAACATTACTATTTCCACGCA

Coding sequence (CDS)

ATGTTCCATAACTTTGAGGACCAGAGGAGTGCAAGGAAACTCGCAGGGCAATCGCAGGGCAATCGCAGGGCAATCTCTGCCTTATCTCGGGGAGCCTCAATTCAAAGTATGGAGGAAATAATTACCCACCCAAAACTGAAGTACCCAGAAGGATTTGGGGAGTCTCTAGTGGAGAACATGAATGACGAAGGAGGACAACGTGTGAAAACAGAGGAAGGGTATGCCAATTGGAGTAGGTTTAGGTGGGTGGAGATGCCGATGTTTGACAGCTGTCAACCTGACTCTTGGATATTCAGGGCAGAAAGGTTTTTAAGCGAAAGAAAGAGTAGTAGCGACGCGAAAAACTTCAGGCGAATAGGGCATACGTCAACTAGGCGACAAGAGGAAGGATGCTAG

Protein sequence

MFHNFEDQRSARKLAGQSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENMNDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAERFLSERKSSSDAKNFRRIGHTSTRRQEEGC
Homology
[Close]
BLAST of MELO3C029494.jh1 vs. NCBI nr
Match: KAA0062561.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (545), Expect = 6.13e-69
Identity = 104/114 (91.23%), Postives = 107/114 (93.86%), Query Frame = 0 

Query: 1   MFHNFEDQRSARKLAGQSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENM 60
           MFHNFEDQRSARKLAGQSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENM
Sbjct: 1   MFHNFEDQRSARKLAGQSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENM 60

Query: 61  NDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAERFLSERKSSSDAK 114
           NDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAER+    + S+  K
Sbjct: 61  NDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAERYFHIYQLSNSEK 114

[Close]
BLAST of MELO3C029494.jh1 vs. NCBI nr
Match: TYK28781.1 (hypothetical protein E5676_scaffold403G001460 [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (458), Expect = 3.21e-54
Identity = 86/96 (89.58%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 6   EDQRSARKLAGQSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENMNDEGG 65
           +  +  R + G SQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENMNDEGG
Sbjct: 78  DSDQMTRGVQGNSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENMNDEGG 137

Query: 66  QRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAE 101
           QRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAE
Sbjct: 138 QRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAE 173

[Close]
BLAST of MELO3C029494.jh1 vs. NCBI nr
Match: KAA0055669.1 (hypothetical protein E6C27_scaffold181G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 1.98e-07
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 37 MEEIITHPKLKYPEGFGESLVENMNDEGG-QRVKTEEGY 74
          MEE +T P+ KY EG GESLVEN+NDEGG QRVKTEEGY
Sbjct: 1  MEERMT-PQRKYVEGIGESLVENVNDEGGGQRVKTEEGY 38

[Close]
BLAST of MELO3C029494.jh1 vs. NCBI nr
Match: TYK09923.1 (hypothetical protein E5676_scaffold16G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 1.42e-06
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 44 PKLKYPEGFGESLVENMNDEGG-QRVKTEEGY 74
          P+ KY EG GESLVEN+NDEGG QRVKTEEGY
Sbjct: 3  PQRKYVEGIGESLVENVNDEGGGQRVKTEEGY 34

[Close]
BLAST of MELO3C029494.jh1 vs. NCBI nr
Match: KAA0031744.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 7.82e-06
Identity = 23/63 (36.51%), Postives = 40/63 (63.49%), Query Frame = 0 

Query: 52  FGESLVENMNDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAERFLSERKSSS 111
             ES   + ND G +R+ +++GY++ ++F+ +EMP+F    PDSW+FRAER+    + + 
Sbjct: 96  MNESDRNHRNDGGERRIDSDDGYSDRNKFKKIEMPVFTGEDPDSWLFRAERYFQIHRLTE 155

Query: 112 DAK 114
             K
Sbjct: 156 SEK 158

[Close]
BLAST of MELO3C029494.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VA79 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00480 PE=4 SV=1)

HSP 1 Score: 214 bits (545), Expect = 2.97e-69
Identity = 104/114 (91.23%), Postives = 107/114 (93.86%), Query Frame = 0 

Query: 1   MFHNFEDQRSARKLAGQSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENM 60
           MFHNFEDQRSARKLAGQSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENM
Sbjct: 1   MFHNFEDQRSARKLAGQSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENM 60

Query: 61  NDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAERFLSERKSSSDAK 114
           NDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAER+    + S+  K
Sbjct: 61  NDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAERYFHIYQLSNSEK 114

[Close]
BLAST of MELO3C029494.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DYX9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001460 PE=4 SV=1)

HSP 1 Score: 181 bits (458), Expect = 1.56e-54
Identity = 86/96 (89.58%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 6   EDQRSARKLAGQSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENMNDEGG 65
           +  +  R + G SQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENMNDEGG
Sbjct: 78  DSDQMTRGVQGNSQGNRRAISALSRGASIQSMEEIITHPKLKYPEGFGESLVENMNDEGG 137

Query: 66  QRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAE 101
           QRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAE
Sbjct: 138 QRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAE 173

[Close]
BLAST of MELO3C029494.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UQC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00370 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.58e-08
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 37 MEEIITHPKLKYPEGFGESLVENMNDEGG-QRVKTEEGY 74
          MEE +T P+ KY EG GESLVEN+NDEGG QRVKTEEGY
Sbjct: 1  MEERMT-PQRKYVEGIGESLVENVNDEGGGQRVKTEEGY 38

[Close]
BLAST of MELO3C029494.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CDH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00390 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.86e-07
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 44 PKLKYPEGFGESLVENMNDEGG-QRVKTEEGY 74
          P+ KY EG GESLVEN+NDEGG QRVKTEEGY
Sbjct: 3  PQRKYVEGIGESLVENVNDEGGGQRVKTEEGY 34

[Close]
BLAST of MELO3C029494.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SKP9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00050 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.79e-06
Identity = 23/63 (36.51%), Postives = 40/63 (63.49%), Query Frame = 0 

Query: 52  FGESLVENMNDEGGQRVKTEEGYANWSRFRWVEMPMFDSCQPDSWIFRAERFLSERKSSS 111
             ES   + ND G +R+ +++GY++ ++F+ +EMP+F    PDSW+FRAER+    + + 
Sbjct: 96  MNESDRNHRNDGGERRIDSDDGYSDRNKFKKIEMPVFTGEDPDSWLFRAERYFQIHRLTE 155

Query: 112 DAK 114
             K
Sbjct: 156 SEK 158

The following BLAST results are available for this feature:
BLAST of MELO3C029494.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062561.16.13e-6991.23transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa][more]
TYK28781.13.21e-5489.58hypothetical protein E5676_scaffold403G001460 [Cucumis melo var. makuwa][more]
KAA0055669.11.98e-0776.92hypothetical protein E6C27_scaffold181G00370 [Cucumis melo var. makuwa][more]
TYK09923.11.42e-0681.25hypothetical protein E5676_scaffold16G00390 [Cucumis melo var. makuwa][more]
KAA0031744.17.82e-0636.51Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C029494.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029494.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VA792.97e-6991.23Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3DYX91.56e-5489.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UQC19.58e-0876.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CDH66.86e-0781.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SKP93.79e-0636.51Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of MELO3C029494.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029494.jh1.t1MELO3C029494.jh1.t1mRNA