MELO3C029177 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAATCCAAGCTCCATAAGCAACATTAGGATTGAAAGTTCACTTGCACATTCGATAATTAACTCAATAAAATCTGGAAATCAAGAGCTTCAGCATCGATTGCATCTCAAACTATGTGGTATTAGCACATTTCTATACAAGCGGGGAAAGCTAAATGTGTTACTAAAAAATAATTCTGCCAACTGAACCATGTTCGAAGACGGCCCCACTTAGCCAACAATGCCGTATTTATTTGCTTCCAACCTCGAATACCAGACCTCCATTAATTTAGAAATCAAATCTAATTTAGACTGACCTTACCACTTTTAAGTCCTTCTCTAAAGTATTGTGCAATTTTTGAAATTTTGTCAAAATATTAATTCTTATAACTTTGCCCCCCCCCAAAAAAAAAAGAAAAAAAAAAGGATAAAAAAAGAAAAAAAAAGAAGAAAAAAGAAAAAATAATTGCTAATAGATATTGATCATGTTATGGACATTGGTGTCTGTATTGTTAGCAGCTTTAATCTAATTTATTCCCTTGATATTTTGAACAATGCAATAAGTCAATTCAAAAGCATTTCGATTGCATTTTTGCAGTACTTTGTTGTCTCACATGTAGTCTGATAACCTAGTTTTTATAATGAAACAGATCTCTTTCATAGTCAAGGAGCTGATTTGGCACAACATTTGTCAAAGATACGTTGTCCGGAAGAAGTTAATCCTGCATGGAGATGGTATCCAAATCCTATCCAACCCTTTTTGTTTTACGTCTTTTCAGCTAATCCCTAAGAGAGATGCCAATGACATCAACCCATTTAAAAAACTATTTAGGCATATTCGAACCATTACTAATTCAAGACGAATGACATTTCCCCCCTTTAACTTGTAATTCTATAGTGGTAAAGTATCGAAGATTTAGTTTTGAAATTTATTTTTTGATTTTTTAGCTTTTGATTTACAATTTAGCATTCCTATTTGGATCAAAACTTCTTTTGTTCAATGTTGCATTTTGGATATAAGCAGCTTTTATACGTTTAGCCGAGGAACCTATCATGCCAACCGAGTATGATAATTTAAAGCATTGCAGCTTCAAATAAGAATTTGCCAGCTTAAAAATGAAAGTATAATTTGTCTAATATTTTATATTCTCTTAATGGTGCTAGCTATGTACAATAAAACAATCTCTTTGATTTCAGGACGTTCTACCAACCATGGAAAGATTATTCATTGGAATTAACAAATTTGCAGAAGATGGATGAAGTTCATGCTTGTCAAACTCTTCAACTAGTGATCTCAAATATTCTGAGTAAAAAGCCTCTCGATCTTCAATTTTTGTTACCTCAAGACATTGAGATTTCACGAGTATTTGAGTGGGAGAGAAATCTCATAAGAACCCAAGATTCAAATCCTCAACAGAAAAAGGTTAGTCTTTAGAGTCAGCATTGTTCGTTTTTGTATACATAGATAGCTCAAAGTAGTGTTGATAATTGATCTAGAGTTTATAAAAGTATATATGTTTATCTGATTTGGATTTATTTGTACGCAAATGAGGAAAGAAAATGATTGAAATTTTGACAAATTCTCAAAAAGTAGTGAAAGAAGTACAAATGGTTAAAGCAACTAGTTTTTTCAAGCATAAGTGATCTGCTTTTGATGAGGTCACTTAAAAGAGAGACTATGGCTGGCTAGTTGCCCCTTTTCGAGTGCCTCTATAAGTTGCCCCATTATCTCATTATCTGTAGGGAAGTTGAGAATATTTGTTGATGTGCGATATATTTGTAAATTGAAGAGGTTGACATCAATATTAAATATGCATAAATATCTCCAACATCTTTTATAAAGGATCATAACACATAAAGAAATGTCGTCCATTTCCTAAATAACAATAGGAATACTAATAAGAAAATCAATAAGAATACTAATTACGATATTAATAAGAAACTAATAACAATGCCCATAATTTAGTTTGGGAGTACAAATAATTTTATTATCAATCTAAAAGAGTTCTCTTTTTTTATTTTTTTATTTTTATTTTTTTATTTTTTGTTATTTTTAATTTTTTTTATTATAAATTTTGATGATCTTAGTCAAGTTTAGTTTGTTGATATCTATATTTGATCAATATATCCGAAAAAATTGAAATTTCATTTTAATCCATGTTTGGATGATGGGTAAATTGGCTGCTTATTGTTGAGCATCTCGTTAGTTTACTTTTTGATAGATTCATCTCTAGTTATTGATAGTGGAGGATCAGTTGCGAGAGTTTCTTCATGTAATCTATCTTATGATATTATATATAGAGGTACGTTTATGGATTGTTGTTTACTTTTTTTTTTCAAGACCTCTCATGCATGTCTCCTCTCCTCAATTATCAGTAGTTCTTTATTCATATATTTCTAGGTTGAAAACAAAGTATTCAATCAAGTCGCTTGATATGACTACCTCATAATAATTATGGGATATAAGTTGGAGGTACTTTTCCTTAACCATTACAACTTTTTGGACACATCAAGGTGTCTTCATTGAATAGTTTTCTTTACAATTTGTTTTTTTGTAACACTAGTTAGTTTTGATTAAATTATACCATAAATTGTTGTGTAGAATTAGCTTTTCACTTCCCAAATACTTCTCATTAAAATGAGTATGAAACTCTTTTAATATATTCTCTATGCGATTATACTAATTTGATATTTGCTCAACCTAAATGTTTGGTACGAGCGGTATTGTTCTCTCTAGGGATGTGACAAGAAAAGAGTAGTACTAACAAAGTTCGCAACAAAGTAATATCTTCAATGAGATAGTTGAACCGAACAAGCAAAGTCTTTTTTTTGCATATGCTCGTTATCTCAGGAGTTTGACTCCACCTTGAGTTGCGGGTTGGTCTCGATTCATTCCTATTGA ATGAAGAATCCAAGCTCCATAAGCAACATTAGGATTGAAAGTTCACTTGCACATTCGATAATTAACTCAATAAAATCTGGAAATCAAGAGCTTCAGCATCGATTGCATCTCAAACTATGTGATCTCTTTCATAGTCAAGGAGCTGATTTGGCACAACATTTGTCAAAGATACGTTGTCCGGAAGAAGTTAATCCTGCATGGAGATGGTATCCAAATCCTATCCAACCCTTTTTGTTTTACGTCTTTTCAGCTAATCCCTAAGAGAGATGCCAATGACATCAACCCATTTAAAAAACTATTTAGGCATATTCGAACCATTACTAATTCAAGACGAATGACATTTCCCCCCTTTAACTTGACGTTCTACCAACCATGGAAAGATTATTCATTGGAATTAACAAATTTGCAGAAGATGGATGAAGTTCATGCTTGTCAAACTCTTCAACTAGTGATCTCAAATATTCTGAGTAAAAAGCCTCTCGATCTTCAATTTTTGTTACCTCAAGACATTGAGATTTCACGAGTATTTGAGTGGGAGAGAAATCTCATAAGAACCCAAGATTCAAATCCTCAACAGAAAAAGTTATTGATAGTGGAGGATCAGTTGCGAGAGTTTCTTCATGAGTTTGACTCCACCTTGAGTTGCGGGTTGGTCTCGATTCATTCCTATTGA ATGACATTTCCCCCCTTTAACTTGACGTTCTACCAACCATGGAAAGATTATTCATTGGAATTAACAAATTTGCAGAAGATGGATGAAGTTCATGCTTGTCAAACTCTTCAACTAGTGATCTCAAATATTCTGAGTAAAAAGCCTCTCGATCTTCAATTTTTGTTACCTCAAGACATTGAGATTTCACGAGTATTTGAGTGGGAGAGAAATCTCATAAGAACCCAAGATTCAAATCCTCAACAGAAAAAGTTATTGATAGTGGAGGATCAGTTGCGAGAGTTTCTTCATGAGTTTGACTCCACCTTGAGTTGCGGGTTGGTCTCGATTCATTCCTATTGA MTFPPFNLTFYQPWKDYSLELTNLQKMDEVHACQTLQLVISNILSKKPLDLQFLLPQDIEISRVFEWERNLIRTQDSNPQQKKLLIVEDQLREFLHEFDSTLSCGLVSIHSY Homology
BLAST of MELO3C029177 vs. NCBI nr
Match: XP_008458089.1 (PREDICTED: uncharacterized protein LOC103497624 isoform X3 [Cucumis melo]) HSP 1 Score: 157.1 bits (396), Expect = 8.6e-35 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of MELO3C029177 vs. NCBI nr
Match: XP_008458087.1 (PREDICTED: uncharacterized protein LOC103497624 isoform X1 [Cucumis melo]) HSP 1 Score: 157.1 bits (396), Expect = 8.6e-35 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of MELO3C029177 vs. NCBI nr
Match: XP_011659212.1 (uncharacterized protein LOC101215477 isoform X1 [Cucumis sativus] >KAE8646269.1 hypothetical protein Csa_016391 [Cucumis sativus]) HSP 1 Score: 154.5 bits (389), Expect = 5.6e-34 Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0
BLAST of MELO3C029177 vs. NCBI nr
Match: XP_011659213.1 (uncharacterized protein LOC101215477 isoform X2 [Cucumis sativus]) HSP 1 Score: 154.5 bits (389), Expect = 5.6e-34 Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0
BLAST of MELO3C029177 vs. NCBI nr
Match: XP_038897459.1 (uncharacterized protein LOC120085516 isoform X1 [Benincasa hispida] >XP_038897460.1 uncharacterized protein LOC120085516 isoform X1 [Benincasa hispida] >XP_038897461.1 uncharacterized protein LOC120085516 isoform X1 [Benincasa hispida]) HSP 1 Score: 137.5 bits (345), Expect = 7.1e-29 Identity = 67/76 (88.16%), Postives = 70/76 (92.11%), Query Frame = 0
BLAST of MELO3C029177 vs. ExPASy TrEMBL
Match: A0A1S3C7M7 (uncharacterized protein LOC103497624 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497624 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.2e-35 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of MELO3C029177 vs. ExPASy TrEMBL
Match: A0A1S3C6K1 (uncharacterized protein LOC103497624 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497624 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.2e-35 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of MELO3C029177 vs. ExPASy TrEMBL
Match: A0A0A0K4N8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G368170 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.7e-34 Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0
BLAST of MELO3C029177 vs. ExPASy TrEMBL
Match: A0A6J1H985 (uncharacterized protein LOC111460777 OS=Cucurbita moschata OX=3662 GN=LOC111460777 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.2e-28 Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 0
BLAST of MELO3C029177 vs. ExPASy TrEMBL
Match: A0A6J1DRJ3 (uncharacterized protein LOC111023605 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023605 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 8.4e-28 Identity = 63/76 (82.89%), Postives = 71/76 (93.42%), Query Frame = 0
BLAST of MELO3C029177 vs. TAIR 10
Match: AT4G27010.1 (CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10 Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of MELO3C029177 vs. TAIR 10
Match: AT4G27010.2 (INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 312 Blast hits to 226 proteins in 103 species: Archae - 0; Bacteria - 2; Metazoa - 129; Fungi - 90; Plants - 83; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10 Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of MELO3C029177 vs. TAIR 10
Match: AT1G72270.1 (CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 7.6e-05 Identity = 30/89 (33.71%), Postives = 47/89 (52.81%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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