MELO3C028924 (gene) Melon (DHL92) v4

Overview
NameMELO3C028924
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 9984610 .. 9987656 (+)
RNA-Seq ExpressionMELO3C028924
SyntenyMELO3C028924
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTTTCCCACAACCGCTTCCAGCCAACCTCCAGCAACTGCTTTTTGACAATTGTAAGTGGCCAAACTTTGGATGATCATTTTCTAGTGACTGTCACAGAACAACTATTGACCACCATTAGTCGTCTACATCAAATTTTTGGTAATTTTTTTTCTAACTACTGTTTTTTATCGACTACTAAAGATCAACTTTCGTCTACTGTTTTTCGACAACCGTTGTTGGTCGACCTTTGATAATCATCGCCAATCCAACTTTCGAAGAACGTTTTTATGAAAACAGTTTTTGTCCACTGCTACATTTTCAATAATCATCGCTAACCGACGTTCAACAACTATTTTCCAACGGCCTCTATTAGTAAACCTTCGACCACCATTTGTCAGCATTGCCACCAGCCAAAATTTGCCGACTACTTTTCGACAATTGAGATTGGCCAACTTTTGTCCACCATTTTTAATGACCGTTGTTGGCCAACTTTTTTCGATTGTTGTCAGCCAACTTTGGTCGACCATTTTTCAGTGATCATAGTCAGTTACTTTTTTCAATCATTCTCAGTGGTCTTGGCAAGCCAGCTTTAATCGATCGTTTTTCGATAACAGTTGTAAGCCAACTATCGATGACCATTTTCGATGATCGTTGTCGACTAACATTTATCATTCTTTGTTCGATGACTCTTGTCGACTAACTTTCATTGACCATTGTCCTTCAACTTTCATTGACTATTTTACGATAATAATTACTAGCCAACTATTGACGATTGTTTCCGGTGAACATTGTTGACCAACTTTTGTCCACTATTGCTCGATGACCATTGTCAGCCAACTCTTTTTTACTATTTTTTGTGGTCATTTCCTGTCGACTTTTGTTGATCGTTTTTTGATGATTGTTGTCAACTTACTTTCATCAACTGTTTTTCAATAGTTATCAGACAACTTTTGTCCATTGTTTTCCCGTGACTATTTTCAGGCAACTAGCAATAACCATTTTTTGTGATTGCCTTTGATTGACTTCCAACAATTGTTGTTGCCAATCTCTAATTATCAGTTTACGGTGACTATCTCTGGCCATCTCCGATCACAATCTCGATGACTGTTACCGAACTTCTATCAAAATCTCCCTAGACAAAATTCTTTATTATAATTTGAAATTATATATAAGAAATTAGCATATAACAAATCAAAGAAATTTTTACCTAAAAAACACTTTTGAAAAAAAGTTGTCAAACGTACGTGTTTTTCTTTTAAGGAGTTTTTAGAAAAAAAAATGTTTGAATAAAAATGCACTTTTTGGAAAATATTTTTTTCTTAAGTCATTCCAAACAAACCTTTAATATTATATCATTCAATAATATGGAAAAAAAAAAAACTCTAGCTAGGCCTAACCTATTAGGAGTACTTATTTTGGCGAGGGAACTAACAATTTTATCTCATATTTATATGGCTTGGGTTGGATGTGCTTTCTAGACCAACCTAAAGAATGTGAGTTGGTCGATTTGGCTATTGTATAAACTTAAATAGGTTCTTGGTAGCTCTCCAAAAGAGTTATCTTCCTCCGCTTAAATCACGATAGTTCTACGATATTTAACAAATTATTCTAGTTCTTATACAGGTCATCAAGCATATTGGAGCCTAGGCACATTCTTTTTTTATTTTTTTAAAGTAAGGCACATTCTAATTAAATTATGTCATAATTGGAGTCTTCTATCCTCTAAGAGCCGAGGGTTGAATATATTGACCAACATCTCCCTGATATTTTTCACTCTTATATTGGTTCCATAACTTATTCTACTTTTTGGGTTCTAAACTGTAATATAATTTTGTATTCAACTCATCAACAAGTATATATTTGGGTTCTAAATCTTTGGATTATTTTGTATCGTTATAAACATTATAGACATTGATGTTAGTTTTGTCAATATGAAATATACAAGTGTTTTATGAGTTATGAGGCCAGTTAAAGGGGACTAATAATGTGTATGTTGAAGAGATAGTGCCAACGTTTTTGTATATATGCTTGCACACCATGTGAAATATCGAGTAATTGGTTGTGGTTTTAAATAGTTTAGTTGAACTTTTAGTAAACGTTATTGACATTCATATCTAATGCCAATATTTTTTTTTTTTTTTGGAAGACCTTGGTGGCAATACAAGCATGTTCAACATATTCATATCAAATAACTTCATTGAAAAAGATGTAAGTGTTAAAGATTTATCTTCTTCGCTTTTTTTATCTAATTGTGGTGTTTATCTTTAATCTCGTTGCTTTTGCACTTGCTGTCGCTGTAGAGTAGAGAAGAGCTACTGTAAGTTATGTGTATTTGTTGCAACTCTCTATTGCTTGCTTTTATTGTTTGATGAATGTTGTTTTTCTGATAAGAAGTATTATTGAGAATTTGAAAGGGTTTGTGATTTTCATATTGGTTATGCTGAAATGGTTTATTGATTTTTGGGTTAAGTTATATGTAGGTGGCTTTTGTATAGAAATGCTTTAGTGGTTTAAATTATGTGTAGGTTGATGTAATTACATGTATATATGTAATTACATGTATATATTATCTTGTTTTTAGATCATTTTTTCAATTGTTTGTGAATTATGACGGGATTGTGAAGATCATTTTTTTAATCGTTGTTATTGGTTTATGATTAATTAAGACTAATGGCTGTTGCTTTGTGGATATTTGTACCATTTTATTTATCTTTATACTAAGCTCGGGTTGTTATTGGTTTTTGAATCAGAAATATTTGACTGTTGTTTTGTCCGTTGTAGGTGTGCGCTATTTCCTGTATTTATAATAAGTTTTATTCTGAGTTACAATCATCATTTTCTTTTCTTACTAGATTTTGCAAGAATCCATTGGAGCAGTGAAGCCATGTTTGCGGCAATTGATTGATTCATAAGTCTTTTTGTAGGTTTGGTAGTCAAATTTTGGTTCAAATGTATTTATTTAAATAGCTTGTTCATCACTTTATTGTACAAACACTTTATGACGAACAATTGTACATATATTAAAGTATATATATTAATGTGTTCACCATTTCTTTCCATA

mRNA sequence

ATGGTTTTTTCCCACAACCGCTTCCAGCCAACCTCCAGCAACTGCTTTTTGACAATTGTAAGTGGCCAAACTTTGGATGATCATTTTCTAGTGACTGTCACAGAACAACTATTGACCACCATTAGTCGTCTACATCAAATTTTTGACCTTGGTGGCAATACAAGCATGTTCAACATATTCATATCAAATAACTTCATTGAAAAAGATATTTTGCAAGAATCCATTGGAGCAGTGAAGCCATGTTTGCGGCAATTGATTGATTCATAAGTCTTTTTGTAGGTTTGGTAGTCAAATTTTGGTTCAAATGTATTTATTTAAATAGCTTGTTCATCACTTTATTGTACAAACACTTTATGACGAACAATTGTACATATATTAAAGTATATATATTAATGTGTTCACCATTTCTTTCCATA

Coding sequence (CDS)

ATGGTTTTTTCCCACAACCGCTTCCAGCCAACCTCCAGCAACTGCTTTTTGACAATTGTAAGTGGCCAAACTTTGGATGATCATTTTCTAGTGACTGTCACAGAACAACTATTGACCACCATTAGTCGTCTACATCAAATTTTTGACCTTGGTGGCAATACAAGCATGTTCAACATATTCATATCAAATAACTTCATTGAAAAAGATATTTTGCAAGAATCCATTGGAGCAGTGAAGCCATGTTTGCGGCAATTGATTGATTCATAA

Protein sequence

MVFSHNRFQPTSSNCFLTIVSGQTLDDHFLVTVTEQLLTTISRLHQIFDLGGNTSMFNIFISNNFIEKDILQESIGAVKPCLRQLIDS
Homology
[Close]
BLAST of MELO3C028924 vs. NCBI nr
Match: XP_016901852.1 (PREDICTED: uncharacterized protein LOC103495978 [Cucumis melo])

HSP 1 Score: 73.6 bits (179), Expect = 9.8e-10
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0 

Query: 48  FDLGGNTSMFNIFISNNFIEKDILQESIGAVKPCLRQLID 88
           FDLGGNTSMFN FISNN+IEK+ILQESIGA+K CLRQLID
Sbjct: 94  FDLGGNTSMFNKFISNNYIEKNILQESIGAMKSCLRQLID 133

[Close]
BLAST of MELO3C028924 vs. ExPASy TrEMBL
Match: A0A1S4E0T4 (uncharacterized protein LOC103495978 OS=Cucumis melo OX=3656 GN=LOC103495978 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.8e-10
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0 

Query: 48  FDLGGNTSMFNIFISNNFIEKDILQESIGAVKPCLRQLID 88
           FDLGGNTSMFN FISNN+IEK+ILQESIGA+K CLRQLID
Sbjct: 94  FDLGGNTSMFNKFISNNYIEKNILQESIGAMKSCLRQLID 133

The following BLAST results are available for this feature:
BLAST of MELO3C028924 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016901852.19.8e-1087.50PREDICTED: uncharacterized protein LOC103495978 [Cucumis melo][more]
BLAST of MELO3C028924 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028924 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E0T44.8e-1087.50uncharacterized protein LOC103495978 OS=Cucumis melo OX=3656 GN=LOC103495978 PE=... [more]
BLAST of MELO3C028924 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028924.1MELO3C028924.1mRNA