MELO3C028807 (gene) Melon (DHL92) v4

Overview


Name	MELO3C028807
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	histone H1-like
Location	chr01: 21586552 .. 21588534 (-)
RNA-Seq Expression	MELO3C028807
Synteny	MELO3C028807

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTATCTGTTTGTTGAACATGACAAGCCGACTACTTAACCTTTAAACATTTTAGTCATTTCATCGCAACGAAATTACCAGCAACGTATTAGCTTCCTCTCTTTTCTTAATATCCCAATTTTTCATTTCGATAATTTTCTTCTTCTTCTACCCTAATCCAATTCAATTCTTCTGTTCCCTTAACCCTAATTCTACTTTCATATTGTTGGATTTGATTTCGTTTCTACTCCAATGGCTACTGAGGAACCGGTGGTGCCGGTGGAGTATGCGGCAGAGCTGACTAACGCCGAACAAGCGGAAGAAAATCCGGCCAACGAAGCTGCGAAGTCTAAGAAGTCGAGAGAGCCTAAAGAGAAGAAACCTGCTGCTCATAGAAAACCAAGAAGTCCTCCAACTCATCCTCCATATGAAGAGGTGTGTTGCTCAATCGAATTTGAATTTTCTTTTGAATTTAATGTTAGGTGTATTGGATCTGTTTTGTTGATTTTGTTTGGTGTTTTGATTTCAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGGACTGGTTCGAGTCAGTATGCGATCACTAAGTTTATTGAAACAAAGCAAAAGCAACTTCCATCTAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTCTCGCCTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTTAAGCTTAAGCCGGCAGTTGCGAAACCTGCTTCTCCTGTGAAGAAGCCTGTAGCTGCTAAGCCGAGGTCTAAACCGTAGCTAAGCCTAAAGCTGTGGCTAAGTCTCCTGCGAAGCCGAAAGCTGCTGCAAAGCCGAAGCCTAAGACGGCTGCCAAACCCAAAGCTGCTCCTAAACCTAAACCTGCTCCAGCCAAGTCAAAAAGCAGTGCTGTGGCGAAGCCCAAAGCTGCGACAAAGACCAAAGCCGCTCCCAAGCCGAAAGCCAAGGAAAAGCCTGCGAAGGTTGCAAGGACTTCGACCAGAACCTCACCCGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTAAAGAAGGCGCCCGCGGCCAAGAAGGCTCTGGCAAGAAGTGTGAAATCTAAGAAAGTGGAATCGCCGGCGAAAACGGCTCCGGCTAAAAGAGGAAGGAAGTAAAAGGGGGTAGATCGTGGCGGCGGTCCTGTAAATTCGTAATCCCTCCCGTACAGACCCTTACATGCCGTGCTACAGAGGAGTTTACTTCAAGCTTTTCGAAAATTTCTTTTATTTGTTAATTTGTATAACTTTTTCTCTCCCCAAGTTGATATATCACTCAGATTAGTTTTTAATAGATATTCTGTGATCATTTAGCGACGTTGATTCCATTTCTCAACCTATTATTTCTATGGGCAATTCGACTCCATCAATTATCAAGGAAATTATTTGTTTCTCTTAACGCTCGAAATGGACTTGGATTGGATTTCGTAACTGAAGTTTGAAGCCTTCTTGCTAAGCTTGGTAAATCTCAATCCTTCTTGTATTTCTCGCCCCAATTTTCCGTTTGTATGGTTCAGATTTTGCCTAATATCTGTCTAAAAGATGAATTCTTAGATATATTGTTAATCAACTTGTTATATTTGATGGTTTTGATCATTAGTATTAATTCTTTGGGGCTGATGATTTAGCAGCATTCTCACAACTTATGGTATTTAATCTACAGATGTTTGCATTAGTTGTTCCTTGTAGTTAGTTTTATTTGGGTATGTATTGATTTGCTGATGATTTTTCTTCCACAAGGGATGGATTTATACAAAATACTGGATTAAGAAGTCGTTTGGAACACAAATTTTTGAAGGATAAGAGAAGCTACCCTTATGAAAACATTAAGTTTCGGAAGATTGAGAAGGTGATTGGTGGATAAGAACACGGGTTGGAATTTGGCTAAGAAGTCAAATTTGGTAGGGAGAGATTTGGAGAAAAAAAATAATTTTAACTTATTTGGGATGGGTTTGGGGATAACGGAGAAAAG

mRNA sequence

AGTATCTGTTTGTTGAACATGACAAGCCGACTACTTAACCTTTAAACATTTTAGTCATTTCATCGCAACGAAATTACCAGCAACGTATTAGCTTCCTCTCTTTTCTTAATATCCCAATTTTTCATTTCGATAATTTTCTTCTTCTTCTACCCTAATCCAATTCAATTCTTCTGTTCCCTTAACCCTAATTCTACTTTCATATTGTTGGATTTGATTTCGTTTCTACTCCAATGGCTACTGAGGAACCGGTGGTGCCGGTGGAGTATGCGGCAGAGCTGACTAACGCCGAACAAGCGGAAGAAAATCCGGCCAACGAAGCTGCGAAGTCTAAGAAGTCGAGAGAGCCTAAAGAGAAGAAACCTGCTGCTCATAGAAAACCAAGAAGTCCTCCAACTCATCCTCCATATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGGACTGGTTCGAGTCAGTATGCGATCACTAAGTTTATTGAAACAAAGCAAAAGCAACTTCCATCTAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTCTCGCCTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTTAAGCTTAAGCCGGCAGTTGCGAAACCTGCTTCTCCTGTGAAGAAGCCTGTAGCTGCTAAGCCGAGGTCTAAACCGTAGCTAAGCCTAAAGCTGTGGCTAAGTCTCCTGCGAAGCCGAAAGCTGCTGCAAAGCCGAAGCCTAAGACGGCTGCCAAACCCAAAGCTGCTCCTAAACCTAAACCTGCTCCAGCCAAGTCAAAAAGCAGTGCTGTGGCGAAGCCCAAAGCTGCGACAAAGACCAAAGCCGCTCCCAAGCCGAAAGCCAAGGAAAAGCCTGCGAAGGTTGCAAGGACTTCGACCAGAACCTCACCCGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTAAAGAAGGCGCCCGCGGCCAAGAAGGCTCTGGCAAGAAGTGTGAAATCTAAGAAAGTGGAATCGCCGGCGAAAACGGCTCCGGCTAAAAGAGGAAGGAAGTAAAAGGGGGTAGATCGTGGCGGCGGTCCTGTAAATTCGTAATCCCTCCCGTACAGACCCTTACATGCCGTGCTACAGAGGAGTTTACTTCAAGCTTTTCGAAAATTTCTTTTATTTGTTAATTTGTATAACTTTTTCTCTCCCCAAGTTGATATATCACTCAGATTAGTTTTTAATAGATATTCTGTGATCATTTAGCGACGTTGATTCCATTTCTCAACCTATTATTTCTATGGGCAATTCGACTCCATCAATTATCAAGGAAATTATTTGTTTCTCTTAACGCTCGAAATGGACTTGGATTGGATTTCGTAACTGAAGTTTGAAGCCTTCTTGCTAAGCTTGGTAAATCTCAATCCTTCTTGTATTTCTCGCCCCAATTTTCCGTTTGTATGGTTCAGATTTTGCCTAATATCTGTCTAAAAGATGAATTCTTAGATATATTGTTAATCAACTTGTTATATTTGATGGTTTTGATCATTAGTATTAATTCTTTGGGGCTGATGATTTAGCAGCATTCTCACAACTTATGGTATTTAATCTACAGATGTTTGCATTAGTTGTTCCTTGTAGTTAGTTTTATTTGGGTATGTATTGATTTGCTGATGATTTTTCTTCCACAAGGGATGGATTTATACAAAATACTGGATTAAGAAGTCGTTTGGAACACAAATTTTTGAAGGATAAGAGAAGCTACCCTTATGAAAACATTAAGTTTCGGAAGATTGAGAAGGTGATTGGTGGATAAGAACACGGGTTGGAATTTGGCTAAGAAGTCAAATTTGGTAGGGAGAGATTTGGAGAAAAAAAATAATTTTAACTTATTTGGGATGGGTTTGGGGATAACGGAGAAAAG

Coding sequence (CDS)

ATGGCTACTGAGGAACCGGTGGTGCCGGTGGAGTATGCGGCAGAGCTGACTAACGCCGAACAAGCGGAAGAAAATCCGGCCAACGAAGCTGCGAAGTCTAAGAAGTCGAGAGAGCCTAAAGAGAAGAAACCTGCTGCTCATAGAAAACCAAGAAGTCCTCCAACTCATCCTCCATATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGGACTGGTTCGAGTCAGTATGCGATCACTAAGTTTATTGAAACAAAGCAAAAGCAACTTCCATCTAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTCTCGCCTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTTAAGCTTAAGCCGGCAGTTGCGAAACCTGCTTCTCCTGTGAAGAAGCCTGTAGCTGCTAAGCCGAGGTCTAAACCGTAG

Protein sequence

MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKP

Homology

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BLAST of MELO3C028807 vs. NCBI nr
Match: XP_008447183.1 (PREDICTED: histone H1-like [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 4.6e-65
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE
Sbjct: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120

Query: 121 KLKPAVAKPASPVKKPVAAKPRSK 145
           KLKPAVAKPASPVKKPVAAKPRSK
Sbjct: 121 KLKPAVAKPASPVKKPVAAKPRSK 144

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BLAST of MELO3C028807 vs. NCBI nr
Match: KAA0041935.1 (histone H1-like [Cucumis melo var. makuwa] >TYK17867.1 histone H1-like [Cucumis melo var. makuwa])

HSP 1 Score: 258.1 bits (658), Expect = 4.6e-65
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE
Sbjct: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120

Query: 121 KLKPAVAKPASPVKKPVAAKPRSK 145
           KLKPAVAKPASPVKKPVAAKPRSK
Sbjct: 121 KLKPAVAKPASPVKKPVAAKPRSK 144

[Close]

BLAST of MELO3C028807 vs. NCBI nr
Match: XP_008449373.1 (PREDICTED: histone H1 [Cucumis melo])

HSP 1 Score: 224.6 bits (571), Expect = 5.7e-55
Identity = 132/148 (89.19%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVE AAE TNAEQAEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIE KQKQLPSNFKKLLLFHLKKL+ASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKP---AVAKPASPV-KKPVAAKPRSK 145
           KLKP   AV KPASP  KKPVAAKP+SK
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSK 148

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BLAST of MELO3C028807 vs. NCBI nr
Match: KAA0057394.1 (histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. makuwa])

HSP 1 Score: 224.6 bits (571), Expect = 5.7e-55
Identity = 132/148 (89.19%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVE AAE TNAEQAEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIE KQKQLPSNFKKLLLFHLKKL+ASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKP---AVAKPASPV-KKPVAAKPRSK 145
           KLKP   AV KPASP  KKPVAAKP+SK
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSK 148

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BLAST of MELO3C028807 vs. NCBI nr
Match: XP_004140078.1 (histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 1.4e-53
Identity = 128/149 (85.91%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVE AAE TNAEQAEENPAN++ +SKKS+EPK+KKPAA RKPR+PPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIE KQKQLP NFKKLLLFHLKKL+ SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKP---AVAKPASPV-KKPVAAKPRSKP 146
           KLKP   AV KPASP  KKPVAAKP+SKP
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKP 149

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BLAST of MELO3C028807 vs. ExPASy Swiss-Prot
Match: P37218 (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.9e-30
Identity = 92/151 (60.93%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPV+  E   E    E  ++     A   K  +E K KKPAA RK  + PTHPPY 
Sbjct: 1   MATEEPVIVNEVVEEQAAPETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPYF 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQ+AITKFIE KQK LPSNFKKLLL  LKK +AS KLVKVK+S+
Sbjct: 61  EMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSY 120

Query: 121 KLKPAVAKPASPV----KKPVAA--KPRSKP 146
           KL P+ +KPA+      KKP AA  KP +KP
Sbjct: 121 KL-PSGSKPAAAAVPAKKKPAAAKSKPAAKP 150

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BLAST of MELO3C028807 vs. ExPASy Swiss-Prot
Match: P08283 (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.3e-29
Identity = 94/162 (58.02%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAE--------LTNAEQAE-ENPANEAAKSKKSREPKEKKPAAHRKPR 60
           MATEEP+V VE   E        +T  E  E E P  E  K+KK++  K KK +   KPR
Sbjct: 1   MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAEVEKTKKAKGSKPKKAS---KPR 60

Query: 61  SPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASG 120
           +P +HP YEEMIKDAIV+LKE+ GSSQYAI KFIE KQKQLP+NFKKLLL +LKK +ASG
Sbjct: 61  NPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASG 120

Query: 121 KLVKVKSSFKL-----KPAVAKPASPV---KKPVAAKPRSKP 146
           KL+KVK SFKL     KPAVAKP +      K V AKP +KP
Sbjct: 121 KLIKVKGSFKLSAAAKKPAVAKPKAKTAAKAKSVKAKPAAKP 159

[Close]

BLAST of MELO3C028807 vs. ExPASy Swiss-Prot
Match: P26569 (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-24
Identity = 87/156 (55.77%), Postives = 104/156 (66.67%), Query Frame = 0


Query: 1   MATEEPVVP--VEYAAELTNAEQAEENPANEAAKSKKSREPK-EKKP---AAHRKPRSPP 60
           M+ EE  VP  V+  A  T  +  E+ PA +  KSKK+   K  KKP   AA  K ++  
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIE K K LP  F+KLLL +LK+L+AS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKL----KPAVAKPASPVKK--PVAAKPRSK 145
           KVK+SFK+      A  KPA+PVKK   V AKP+ K
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGK 156

[Close]

BLAST of MELO3C028807 vs. ExPASy Swiss-Prot
Match: P26568 (Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.4e-24
Identity = 78/132 (59.09%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 14  AELTNAEQAEENPANEAAKSKKSREPKEKKP-AAHRKPRSPPTHPPYEEMIKDAIVTLKE 73
           A +T+A   E+ PA +  K+K  +E KEKK  AA  K R+  +HP YEEMIKDAIVTLKE
Sbjct: 20  APVTDA-AVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTLKE 79

Query: 74  RTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSFKLKPAVAKPASP 133
           RTGSSQYAI KFIE K+K+LP  F+KLLL +LK+L+ASGKLVKVK+SFKL  A AK +SP
Sbjct: 80  RTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKASSP 139

Query: 134 VKKPVAAKPRSK 145
                 + P  K
Sbjct: 140 KAAAEKSAPAKK 150

[Close]

BLAST of MELO3C028807 vs. ExPASy Swiss-Prot
Match: Q9M5W4 (Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.1e-24
Identity = 76/126 (60.32%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 21  QAEENPANEAAKSKKSREPKEKKPA-AHRKPRSPPT--HPPYEEMIKDAIVTLKERTGSS 80
           +  E  +    K+   + PKEKK   A +KP+S  T  HP + EMI DAI TLKERTGSS
Sbjct: 13  EVTERKSKRGTKAAAVKVPKEKKKVIAAKKPKSKGTSSHPSFFEMISDAISTLKERTGSS 72

Query: 81  QYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSFKLKPAVAKPASPV-KKP 140
           QYAI KF+E K KQLPSNF+KLLLFHLKKL+ASGKLVKVK+SFKL  A A PA  + KKP
Sbjct: 73  QYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAAPAPALAKKP 132

Query: 141 VAAKPR 143
              KP+
Sbjct: 133 TIPKPK 138

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BLAST of MELO3C028807 vs. ExPASy TrEMBL
Match: A0A5D3D1X0 (Histone H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001390 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE
Sbjct: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120

Query: 121 KLKPAVAKPASPVKKPVAAKPRSK 145
           KLKPAVAKPASPVKKPVAAKPRSK
Sbjct: 121 KLKPAVAKPASPVKKPVAAKPRSK 144

[Close]

BLAST of MELO3C028807 vs. ExPASy TrEMBL
Match: A0A1S3BGU4 (histone H1-like OS=Cucumis melo OX=3656 GN=LOC103489696 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE
Sbjct: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120

Query: 121 KLKPAVAKPASPVKKPVAAKPRSK 145
           KLKPAVAKPASPVKKPVAAKPRSK
Sbjct: 121 KLKPAVAKPASPVKKPVAAKPRSK 144

[Close]

BLAST of MELO3C028807 vs. ExPASy TrEMBL
Match: A0A5A7UQL0 (Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.8e-55
Identity = 132/148 (89.19%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVE AAE TNAEQAEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIE KQKQLPSNFKKLLLFHLKKL+ASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKP---AVAKPASPV-KKPVAAKPRSK 145
           KLKP   AV KPASP  KKPVAAKP+SK
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSK 148

[Close]

BLAST of MELO3C028807 vs. ExPASy TrEMBL
Match: A0A1S3BL93 (histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.8e-55
Identity = 132/148 (89.19%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVE AAE TNAEQAEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIE KQKQLPSNFKKLLLFHLKKL+ASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKP---AVAKPASPV-KKPVAAKPRSK 145
           KLKP   AV KPASP  KKPVAAKP+SK
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSK 148

[Close]

BLAST of MELO3C028807 vs. ExPASy TrEMBL
Match: A0A0A0KDR2 (H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.8e-54
Identity = 128/149 (85.91%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60
           MATEEPVVPVE AAE TNAEQAEENPAN++ +SKKS+EPK+KKPAA RKPR+PPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIE KQKQLP NFKKLLLFHLKKL+ SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKP---AVAKPASPV-KKPVAAKPRSKP 146
           KLKP   AV KPASP  KKPVAAKP+SKP
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKP 149

[Close]

BLAST of MELO3C028807 vs. TAIR 10
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 87/156 (55.77%), Postives = 104/156 (66.67%), Query Frame = 0


Query: 1   MATEEPVVP--VEYAAELTNAEQAEENPANEAAKSKKSREPK-EKKP---AAHRKPRSPP 60
           M+ EE  VP  V+  A  T  +  E+ PA +  KSKK+   K  KKP   AA  K ++  
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIE K K LP  F+KLLL +LK+L+AS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKL----KPAVAKPASPVKK--PVAAKPRSK 145
           KVK+SFK+      A  KPA+PVKK   V AKP+ K
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGK 156

[Close]

BLAST of MELO3C028807 vs. TAIR 10
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25
Identity = 78/132 (59.09%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 14  AELTNAEQAEENPANEAAKSKKSREPKEKKP-AAHRKPRSPPTHPPYEEMIKDAIVTLKE 73
           A +T+A   E+ PA +  K+K  +E KEKK  AA  K R+  +HP YEEMIKDAIVTLKE
Sbjct: 20  APVTDA-AVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTLKE 79

Query: 74  RTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSFKLKPAVAKPASP 133
           RTGSSQYAI KFIE K+K+LP  F+KLLL +LK+L+ASGKLVKVK+SFKL  A AK +SP
Sbjct: 80  RTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKASSP 139

Query: 134 VKKPVAAKPRSK 145
                 + P  K
Sbjct: 140 KAAAEKSAPAKK 150

[Close]

BLAST of MELO3C028807 vs. TAIR 10
Match: AT2G30620.2 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-25
Identity = 86/155 (55.48%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 1   MATEEPVVP--VEYAAELTNAEQAEENPANEAAKSKKSREPK-EKKP---AAHRKPRSPP 60
           M+ EE  VP  V+  A  T  +  E+ PA +  KSKK+   K  KKP   AA  K ++  
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIE K K LP  F+KLLL +LK+L+AS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKL----KPAVAKPASPVKK--PVAAKPRS 144
           KVK+SFK+      A  KPA+PVKK   V AKP++
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKA 155

[Close]

BLAST of MELO3C028807 vs. TAIR 10
Match: AT2G18050.1 (histone H1-3 )

HSP 1 Score: 77.8 bits (190), Expect = 8.0e-15
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 0


Query: 42  KKPAAHRKPRSP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQ-LPSNFKK 101
           KK  A +KPR P   THPPY +MIK+A++ LKE+ GSS YAI K IE K K  LP +F+K
Sbjct: 8   KKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRK 67

Query: 102 LLLFHLKKLLASGKLVKVKSSFKL 123
            L   LK  +A GKLVK+++S+KL
Sbjct: 68  TLSLQLKNSVAKGKLVKIRASYKL 91

[Close]

BLAST of MELO3C028807 vs. TAIR 10
Match: AT2G18050.2 (histone H1-3 )

HSP 1 Score: 62.0 bits (149), Expect = 4.5e-10
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 62  MIKDAIVTLKERTGSSQYAITKFIETKQKQ-LPSNFKKLLLFHLKKLLASGKLVKVKSSF 121
           MIK+A++ LKE+ GSS YAI K IE K K  LP +F+K L   LK  +A GKLVK+++S+
Sbjct: 1   MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60

Query: 122 KL 123
           KL
Sbjct: 61  KL 62

The following BLAST results are available for this feature:

BLAST of MELO3C028807 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447183.1	4.6e-65	100.00	PREDICTED: histone H1-like [Cucumis melo]	[more]
KAA0041935.1	4.6e-65	100.00	histone H1-like [Cucumis melo var. makuwa] >TYK17867.1 histone H1-like [Cucumis ...	[more]
XP_008449373.1	5.7e-55	89.19	PREDICTED: histone H1 [Cucumis melo]	[more]
KAA0057394.1	5.7e-55	89.19	histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. ...	[more]
XP_004140078.1	1.4e-53	85.91	histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumi...	[more]

BLAST of MELO3C028807 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37218	3.9e-30	60.93	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
P08283	3.3e-29	58.02	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P26569	1.9e-24	55.77	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1	[more]
P26568	2.4e-24	59.09	Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1	[more]
Q9M5W4	4.1e-24	60.32	Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]

BLAST of MELO3C028807 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1X0	2.2e-65	100.00	Histone H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G0013...	[more]
A0A1S3BGU4	2.2e-65	100.00	histone H1-like OS=Cucumis melo OX=3656 GN=LOC103489696 PE=3 SV=1	[more]
A0A5A7UQL0	2.8e-55	89.19	Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=...	[more]
A0A1S3BL93	2.8e-55	89.19	histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1	[more]
A0A0A0KDR2	6.8e-54	85.91	H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV...	[more]

BLAST of MELO3C028807 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30620.1	1.3e-25	55.77	winged-helix DNA-binding transcription factor family protein	[more]
AT1G06760.1	1.7e-25	59.09	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.2	2.9e-25	55.48	winged-helix DNA-binding transcription factor family protein	[more]
AT2G18050.1	8.0e-15	54.76	histone H1-3	[more]
AT2G18050.2	4.5e-10	54.84	histone H1-3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 42..63 score: 37.37 coord: 69..86 score: 43.21
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..119 e-value: 8.5E-33 score: 125.0
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..122 e-value: 4.3E-19 score: 68.6
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 55..124 score: 29.773111
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 53..135 e-value: 1.56327E-18 score: 73.0391
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 51..138 e-value: 1.1E-24 score: 88.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..145
None	No IPR available	PANTHER	PTHR11467:SF131	HISTONE H1.1	coord: 2..129
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 2..129
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 52..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028807.1	MELO3C028807.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding