Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTAGTGATCTCAGCTTCTTTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTACATCTCTTCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACACCTGCAACGAACAGAGCAGCAGAAATGAAGCTTTAGGGGCTGTAACAATGGCTGATGGGAACAGAAAAATTGAGAGCAAAGTTGAAGTTGAAGTTGAAGAAGAAAGGAGAAATGGGTTGGTTGTAAATGAAGAAAAGTTTGAAAATTTGATCACAGATAATGAAGATGAAGAAGAAAGATTCATTTCTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAGTTTATTAGAAAAATGAAGGCAGGAATTAAGTTTGAATCACAGCAATTGTTTATATTGTAA
mRNA sequence
ATGAAGTTAGTGATCTCAGCTTCTTTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTACATCTCTTCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACACCTGCAACGAACAGAGCAGCAGAAATGAAGCTTTAGGGGCTGTAACAATGGCTGATGGGAACAGAAAAATTGAGAGCAAAGTTGAAGTTGAAGTTGAAGAAGAAAGGAGAAATGGGTTGGTTGTAAATGAAGAAAAGTTTGAAAATTTGATCACAGATAATGAAGATGAAGAAGAAAGATTCATTTCTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAGTTTATTAGAAAAATGAAGGCAGGAATTAAGTTTGAATCACAGCAATTGTTTATATTGTAA
Coding sequence (CDS)
ATGAAGTTAGTGATCTCAGCTTCTTTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTACATCTCTTCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACACCTGCAACGAACAGAGCAGCAGAAATGAAGCTTTAGGGGCTGTAACAATGGCTGATGGGAACAGAAAAATTGAGAGCAAAGTTGAAGTTGAAGTTGAAGAAGAAAGGAGAAATGGGTTGGTTGTAAATGAAGAAAAGTTTGAAAATTTGATCACAGATAATGAAGATGAAGAAGAAAGATTCATTTCTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAGTTTATTAGAAAAATGAAGGCAGGAATTAAGTTTGAATCACAGCAATTGTTTATATTGTAA
Protein sequence
MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL
Homology
BLAST of MELO3C028684 vs. NCBI nr
Match:
XP_008462077.2 (PREDICTED: gem-associated protein 2-like [Cucumis melo])
HSP 1 Score: 274.2 bits (700), Expect = 7.4e-70
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 13 MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 72
MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG
Sbjct: 1 MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 60
Query: 73 AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE 132
AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE
Sbjct: 61 AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE 120
Query: 133 EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 172
EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 159
BLAST of MELO3C028684 vs. NCBI nr
Match:
XP_011658666.2 (glutamic acid-rich protein [Cucumis sativus])
HSP 1 Score: 249.2 bits (635), Expect = 2.5e-62
Identity = 156/178 (87.64%), Postives = 162/178 (91.01%), Query Frame = 0
Query: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT
Sbjct: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
Query: 61 CNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERF 120
+E+SS NEALGA TMADGNRKIESK VE+EEER NGLVVNE+K ENLITDNE EEERF
Sbjct: 61 SDERSSGNEALGAATMADGNRKIESK--VEIEEERGNGLVVNEDKIENLITDNEVEEERF 120
Query: 121 ISYEE-------EEEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 172
+SYEE EEEEEEE +EEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 MSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 176
BLAST of MELO3C028684 vs. NCBI nr
Match:
XP_038888415.1 (histone H3.v1-like [Benincasa hispida])
HSP 1 Score: 225.3 bits (573), Expect = 3.9e-55
Identity = 139/171 (81.29%), Postives = 148/171 (86.55%), Query Frame = 0
Query: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
MKLVISASLLSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLIGN+
Sbjct: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISTTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
Query: 61 CNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERF 120
+EQS RNEALGA MADGNRKIESK VE+EEER NGL+ EE+ E LIT +EDEEERF
Sbjct: 61 SDEQSGRNEALGA-AMADGNRKIESK--VEIEEERENGLIAKEEENEELITKDEDEEERF 120
Query: 121 ISYEEEEEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 172
Y EEEEEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+F+L
Sbjct: 121 NFY--------EEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVFVL 160
BLAST of MELO3C028684 vs. NCBI nr
Match:
KAG6572225.1 (hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 154.8 bits (390), Expect = 6.5e-34
Identity = 115/181 (63.54%), Postives = 131/181 (72.38%), Query Frame = 0
Query: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++
Sbjct: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
Query: 61 ----CNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNE--EKFENLITDNE 120
C SR M D IE K VE EER NG + E E+ E L+T+ E
Sbjct: 61 GREQCGGHGSREAESPGAAMEDSTTIIERK--VEDGEERENGFIAEEEQEESERLVTEEE 120
Query: 121 DEEERFISYEEEEEEEEEEEEEEEEEEI----DEELNKKCEEFIRKMKAGIKFESQQLFI 172
++E +EE+EEEEEEEEEEE EE+ +EEL+KK EEFIRKMKAGIK ESQQ+ I
Sbjct: 121 QQQEH--EEQEEQEEEEEEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI 177
BLAST of MELO3C028684 vs. NCBI nr
Match:
KAG7011863.1 (hypothetical protein SDJN02_26769, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 148.7 bits (374), Expect = 4.7e-32
Identity = 112/178 (62.92%), Postives = 129/178 (72.47%), Query Frame = 0
Query: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++
Sbjct: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
Query: 61 ----CNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNE--EKFENLITDNE 120
C SR M D IE K VE EER NG + E E+ E L+T+ E
Sbjct: 61 GREQCGGHGSREAESPGAAMEDSTTIIERK--VEDGEERENGFIAEEEQEESERLVTEEE 120
Query: 121 DEEERFISYEEEEEEEEEEEEEEEEEEI-DEELNKKCEEFIRKMKAGIKFESQQLFIL 172
++E +EE+EE+EEEEEE EE + +EEL+KK EEFIRKMKAGIK ESQQ+ IL
Sbjct: 121 QQQE----HEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 172
BLAST of MELO3C028684 vs. ExPASy TrEMBL
Match:
A0A1S3CG16 (gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1)
HSP 1 Score: 274.2 bits (700), Expect = 3.6e-70
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 13 MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 72
MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG
Sbjct: 1 MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 60
Query: 73 AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE 132
AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE
Sbjct: 61 AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE 120
Query: 133 EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 172
EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 159
BLAST of MELO3C028684 vs. ExPASy TrEMBL
Match:
A0A0A0K349 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1)
HSP 1 Score: 244.6 bits (623), Expect = 3.0e-61
Identity = 147/171 (85.96%), Postives = 152/171 (88.89%), Query Frame = 0
Query: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT
Sbjct: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
Query: 61 CNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERF 120
+E+SS NEALGA TMADGNRKIESK VE+EEER NGLVVNE+K ENLITDNE EEERF
Sbjct: 61 SDERSSGNEALGAATMADGNRKIESK--VEIEEERGNGLVVNEDKIENLITDNEVEEERF 120
Query: 121 ISYEEEEEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 172
+SY EEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 MSY-----------EEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 158
BLAST of MELO3C028684 vs. ExPASy TrEMBL
Match:
A0A6J1C4P4 (ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 3.9e-32
Identity = 107/170 (62.94%), Postives = 121/170 (71.18%), Query Frame = 0
Query: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
MK++ISASLLSAMV YSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIG +
Sbjct: 1 MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
Query: 61 CNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERF 120
EQ G K+ESK VE EER NGLV +E+ E LIT
Sbjct: 61 GEEQG-------------GGGKVESK--VEDGEERENGLVAEQEESEKLIT--------- 120
Query: 121 ISYEEEEEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFI 171
E+EE EEEEEEEEE+ +EELN+KCEEFIRKMKA IKFE QQ+ +
Sbjct: 121 ---EDEEHEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 143
BLAST of MELO3C028684 vs. ExPASy TrEMBL
Match:
A0A6J1I0H9 (sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468328 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 114/177 (64.41%), Postives = 129/177 (72.88%), Query Frame = 0
Query: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++
Sbjct: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
Query: 61 CNEQ-----SSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEE-KFENLITDNE 120
EQ S EALGA M D IE K VE EER NG + EE + E L+T+ E
Sbjct: 61 GREQCGGHGSREAEALGA-AMEDSTTIIERK--VEDGEERENGFIAEEEQESERLVTEEE 120
Query: 121 DEEERFISYEEEEEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 172
++E EEE+EEE+ E EE +EEL+KK EEFIRKMKAGIK ESQQ+ IL
Sbjct: 121 QQQE-----HEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 169
BLAST of MELO3C028684 vs. ExPASy TrEMBL
Match:
A0A6J1EJY9 (uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC111435260 PE=4 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 105/174 (60.34%), Postives = 123/174 (70.69%), Query Frame = 0
Query: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLI--- 60
MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI
Sbjct: 1 MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60
Query: 61 GNTCNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEE 120
G+ + SR +MADG+ KIESK VE EER NGL+ +E+ E I
Sbjct: 61 GDRHSGGDSRGAEALEASMADGSSKIESK--VEDREERGNGLIQKDEESERSIV------ 120
Query: 121 ERFISYEEEEEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 172
E+++ +++++EEE EELNKKCEEFIRKMKAGIK ESQQL +L
Sbjct: 121 -------EDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008462077.2 | 7.4e-70 | 100.00 | PREDICTED: gem-associated protein 2-like [Cucumis melo] | [more] |
XP_011658666.2 | 2.5e-62 | 87.64 | glutamic acid-rich protein [Cucumis sativus] | [more] |
XP_038888415.1 | 3.9e-55 | 81.29 | histone H3.v1-like [Benincasa hispida] | [more] |
KAG6572225.1 | 6.5e-34 | 63.54 | hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7011863.1 | 4.7e-32 | 62.92 | hypothetical protein SDJN02_26769, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CG16 | 3.6e-70 | 100.00 | gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1 | [more] |
A0A0A0K349 | 3.0e-61 | 85.96 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1 | [more] |
A0A6J1C4P4 | 3.9e-32 | 62.94 | ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 P... | [more] |
A0A6J1I0H9 | 1.1e-31 | 64.41 | sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
A0A6J1EJY9 | 1.5e-31 | 60.34 | uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC1114352... | [more] |
Match Name | E-value | Identity | Description | |