MELO3C028682.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C028682.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionBeta-galactosidase
Locationchr01: 4083467 .. 4087719 (+)
RNA-Seq ExpressionMELO3C028682.jh1
SyntenyMELO3C028682.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGTGGACTTCAACCTTCACGAAAACGACCAAACGCACAATTCCTTCAAGCTGTTCGCCGATCTCGACACGCCAATCAACAACTCTGCAAGTAGTTCCATCCGAACGTTGCCTCTACCCGATACCATCCGAACGTCGTTGAAGGCCGCCGCTACCATCCAAACGCTGCCGCTCCCTTGCTCGCCAAACTCGTCGTTGACTCGCCGTAAATACTCCATTCGCTGTTTCCCGATTAATGGAGTTCATTAAAATTTGAACAACGTTGTTGAATGTTGCTTCTGAACCCCATGTTTGATTTGTTTGAAAGTTGGGTCATTGCAGGTGTGGGAAGATTTTTGGCGGAGTTGGATGTTTGGTGGATGTTGGAGGAGGGATGTGACTTGTTTGACTATTTTAGTGAAGGCTTGTCCATGGATTAAAGTTATTAATTTTGATCTTCCTCATGTTGCTGCCAATATGTTTGATACTGTCCCAAAGGCTGATGCTGCTGATACGTTTAATTTGTTTGTCGATGGTAAATTTGTTAGATAACAATTGGTAATTGGAGTAGTATAAAAACTGTGAGATTGGTCGATATTTTCAATATGTATAATGGTATCCTCAACTAAATTCAAGATTTAAAAGTTTGTCTAGTTTTAATTTATTTCCATTCAATATCACTCAGACTTCTACATTATCTTTTGGTTTCACATCCAGTTTCATTTATTGGTTCACTTAAGTTTATTGTCGAGTAGTTTTTCGTGCTTATATGAAAATGTTTCCATCTATGAGATAGATGTACATTTTCACTTCTCATTTTTGCTTAGTTCACTCTTAAGGCAACAGAACCATATATTCTCAATTTTAATCATGTTAATGTGTAGGAAATTGATGGTTCAAGTTCAAGCTTTAGTCAACTTCTTGGAATTGAAGGTATTACACAAAATTTTTTATCTTACCTAAAGCAACTTGACTATACTTTGGTATGTATCTGAACTGTCACCTGTAGTAAAGTCATTATGGGCCAAAATCTTTATCATCTTATTTTAATCATCTTAGGCTGCATGTGGACAAAATTTTAAAAAGAACAATGATGCTTTTTTCTTCCTATTTTCTCATATGCTGCTGGTTAATTTTAAGCTTGTTCTGCTTAAAACTTAATAATTCATTCAACTCTGTAACTGTCCTTGTATCTTATGTATTGTGTTGTTAAGTTGCTACCTGTTTTGAGCTTTTTTTGTTTTGTTTTGTTTTCTTCTTGTTCTTAGGGAAAACAAGCTTTTAGACATTGTGCTATACCTGTGTCTTATGTATTGTGTTATTTTTTTTTTCATTTTCTTCTTCTTTTTTTTCACCCCTCTATTTCTTTCAGGATTCCTTACCTGATATTGTTTATTTTTTGGTGTGGATTCTTGAAGATAAGAATCGGGCAACTTCAAGTATAGCAGCTAATGTTGCTATAAAGTTGGTCTGCTATAAAAACCTTTCATTTTAGATCTTTCTCATGCTCTTTCATGTTTGCTAACTTCTCATCAAATACAAATATCTGTAGCATATGCTACAACACTGAATTTGATTATTTCAAATGTACCAAGTAAAAGTGAGGAAGCACTTTGGGAGATCCTTAACAAGTTAGAAGTTGTTCTTCATTTGATTGGCATCATTAGAGATTTTTCTGGAGCTGTGAACCCAATTGAATGCATTTAACCTCTTTTTTCTCTTTTAAGTACATTACTCTGTCGGTTGCTTCTCTCTAGGTTTTCAGTTTGGAGTGATGCTAAACTGGTGGAAACTTTGTATGATATATATGTCAAACCAGACTTTTCAGTTAGAGCTGAAGTTTTGAAGTTGTATTCTGCAATAGGTAATGAATACAATAGAATTTTCCTCTCACTGTTTAATATTTATGCTAATTTTGCCTTTCTGATGCAGGAAGCCCGTAACCTTGAGGATTTTATTTGCGATAGTTGCCTAATACCTTGGGCACTATTGTACTTGTAATGATAAGAAATGCTAAGATTTTCTTTTACATGAAGCATTTCTAAAATTGTGGTTGTAGTACAACACAAAGTATAACGAACTTTGTTCTGCATCGCAATCTAATTAAAGTATGTGTTTCACTGTTTGAAGATGTTGTAACCATATAGTGCTTCTACAATTTTAACTTTTAAGGCTCACGTCAACTTTTCTTGCAGTGTTCCACATCTTACTCACTTAGGATAAGGATATCCGTCTTGGTAAGTTGTACAACTTTCTTCGGTCCTAAATTTCAAATTACATTAGTACTTAGAATTATCCTTGGAATTGTCGTGGTGACTTGGCTTGGTTGCATGACTTTAATGTACGGAATTTTGGACTTGCCAAGAAATTGGAAGTAGACGATTTGGCTTCTTCAGTATTGCCCCTACACTTGAACTGCATTGTATTTTGATTCACAGTTCACCAAAATGGGAGGATTTTGTTGTTTGATAGTCATCCTTTTTTTTTCAGCAGTCGACTGATGTTATCGTAGATTTTCTTGTTTCTATTAAGAGTTTTGTTTATAAAATTGATGCTTATATGTATGTTGAAGATTAAGGTTTCGATTTGTTAGATAGGAGTTGAAGTAATAGGGAGAGTTAGAATTATTCTTTTGATGCTTAAAGAAAATATAATTTAGCTTTTAATTCCTTAACTGAACTTACGGTTCACTGTTCTAGTTCCTATATTTTAGTATATTTAATTGCTTGCTAATGGATTTGATCGCATTAATTATTTTTTATATCACAAAGGTCGTCTCTTTATTTCCTTCGATGCTTATGCTGTAACTATGCTTTTACAAGATTGATAATGGCAAGGAGAATTATCATTACACCAACAAGAAAAGATCCCACATTGAGTGCACTAGGGAAATCTTGAAGTTGGTTAGCTTTCTCTTTTGGTTTTCGAGAGATATAATTATACTCTCAGTTTCTCTTTGAGTAAGCTAAACAGGGGGATGGTTGTATGAATAAAAGGTATTGTCAATTTGTTTAACTTGTTTTTGGTTAGTTTTGGACATCTCTACACGTAGTGATACACCTGACTTATGCATGAATTGCTAATTAACTACAGTTGGTTAGGCAATTGCAAGGTTAATCAATGTTTAGAAATCTTGAAGTCTTGAAGTTGTGAAGTATGTCTTTCACATCTAATCAATGTTTAGATTTTAGATTGGTTTAAATTTATCGTCTTAATCCTTTATTTTAATCAAATGCTTTAAATTTTGAGGACTTTGTATACTTGTCATTGTGGGAAATTATTGAGTCTGGTTTACGTAAATATTTCAATTGGTTGGCATATAATTCATTATCAAAGTGAAGTCTCATTTCAATCGGGTTTATGTTTGCGGGAAAAAGACATCCTTGATATAAACAAACCTGTTGGTCATTTTGGCACTAAGGTTGGTATATTTTGTTGTTTACATGTTAATTTTATTTTTGTAATACTATCAAGTTCAAGAAGGTTTGTGCAGCCACTCCTTTTACATAAAGTAGGCACTTTAGGCAAAATATAGGGCAGAAAGTTCTCTGAGCCACACCATATATGTTGATCCTTTGAGGAAAAAATTGACCTATGGTACACCAAGTTCTTTGAGCCACACTATATGTTGATCCTATTCGAATCTTTGCCAAAAGGATCTTAATAATTTTCATGAATACTAATTCGTTTATGTTAGAATTAGTAGGGCTTTGCTCTAGAGTACTTTTGGAAAGAATAATATATAAGATTTTATTTCCTAAATATTTTCTAGATCTTTTTCTTTCTTATTCCTATTGTACTCTATTTATTCTCCTTTTGTACCTATTGTATTTTGTTCATAAGAAAAATAATAAAAACTAAAGTATCGTGGTTTTTCTCTTGGTTTTCAGGTTTTCACGTAAGTCTCGGGTTGTTGTTAATTGCTTTCAATATGGTATCAGAGCAAAGCAATAACGAAACGCTAGAAAATAACCTAAGAGAAGCCCAGATAGAAATTGAACCCATCACTGCCGCCGCCATAGAGAAACTGCTCCAGAACCTACAGAAACCGCCGATCTACCCAACTGGAGTGGTTTCGCAGCCGTACGCGCTGCCGTCTGACCAGAAGATGATTCACGTGCTGCTTGTGTCCGACACGTGGGCCCACGCGCCGCCGCCGTTTCACGTCACCGCTCAGCCCGTTCCCTTCTACGCGCCGTCGGATGTCCAACCGTCAAACCCTTCCGGCCATCCGCATCCTCACGCGCCGCCTATGAGCTCCGGACAGTAA

mRNA sequence

ATGTCAAGTGGACTTCAACCTTCACGAAAACGACCAAACGCACAATTCCTTCAAGCTGTTCGCCGATCTCGACACGCCAATCAACAACTCTGCAAGTAGTTCCATCCGAACGTTGCCTCTACCCGATACCATCCGAACGTCGTTGAAGGCCGCCGCTACCATCCAAACGCTGCCGCTCCCTTGCTCGCCAAACTCGTCGTTGACTCGCCGTGTGGGAAGATTTTTGGCGGAGTTGGATGTTTGGTGGATGTTGGAGGAGGGATGTGACTTGAAATTGATGGTTCAAGTTCAAGCTTTAGTCAACTTCTTGGAATTGAAGGGAAAACAAGCTTTTAGACATTGTGCTATACCTGTGTCTTATGATTCCTTACCTGATATTGTTTATTTTTTGGTGTGGATTCTTGAAGATAAGAATCGGGCAACTTCAAGTATAGCAGCTAATGTTGCTATAAATACATTACTCTGTCGGTTGCTTCTCTCTAGGTTTTCAGTTTGGAGTGATGCTAAACTGGTGGAAACTTTGTATGATATATATGTCAAACCAGACTTTTCAGTTAGAGCTGAAGTTTTGAAGTTGTATTCTGCAATAGGTTTTCACGTAAGTCTCGGGTTGTTGTTAATTGCTTTCAATATGGTATCAGAGCAAAGCAATAACGAAACGCTAGAAAATAACCTAAGAGAAGCCCAGATAGAAATTGAACCCATCACTGCCGCCGCCATAGAGAAACTGCTCCAGAACCTACAGAAACCGCCGATCTACCCAACTGGAGTGGTTTCGCAGCCGTACGCGCTGCCGTCTGACCAGAAGATGATTCACGTGCTGCTTGTGTCCGACACGTGGGCCCACGCGCCGCCGCCGTTTCACGTCACCGCTCAGCCCGTTCCCTTCTACGCGCCGTCGGATGTCCAACCGTCAAACCCTTCCGGCCATCCGCATCCTCACGCGCCGCCTATGAGCTCCGGACAGTAA

Coding sequence (CDS)

ATGTTGGAGGAGGGATGTGACTTGAAATTGATGGTTCAAGTTCAAGCTTTAGTCAACTTCTTGGAATTGAAGGGAAAACAAGCTTTTAGACATTGTGCTATACCTGTGTCTTATGATTCCTTACCTGATATTGTTTATTTTTTGGTGTGGATTCTTGAAGATAAGAATCGGGCAACTTCAAGTATAGCAGCTAATGTTGCTATAAATACATTACTCTGTCGGTTGCTTCTCTCTAGGTTTTCAGTTTGGAGTGATGCTAAACTGGTGGAAACTTTGTATGATATATATGTCAAACCAGACTTTTCAGTTAGAGCTGAAGTTTTGAAGTTGTATTCTGCAATAGGTTTTCACGTAAGTCTCGGGTTGTTGTTAATTGCTTTCAATATGGTATCAGAGCAAAGCAATAACGAAACGCTAGAAAATAACCTAAGAGAAGCCCAGATAGAAATTGAACCCATCACTGCCGCCGCCATAGAGAAACTGCTCCAGAACCTACAGAAACCGCCGATCTACCCAACTGGAGTGGTTTCGCAGCCGTACGCGCTGCCGTCTGACCAGAAGATGATTCACGTGCTGCTTGTGTCCGACACGTGGGCCCACGCGCCGCCGCCGTTTCACGTCACCGCTCAGCCCGTTCCCTTCTACGCGCCGTCGGATGTCCAACCGTCAAACCCTTCCGGCCATCCGCATCCTCACGCGCCGCCTATGAGCTCCGGACAGTAA

Protein sequence

MLEEGCDLKLMVQVQALVNFLELKGKQAFRHCAIPVSYDSLPDIVYFLVWILEDKNRATSSIAANVAINTLLCRLLLSRFSVWSDAKLVETLYDIYVKPDFSVRAEVLKLYSAIGFHVSLGLLLIAFNMVSEQSNNETLENNLREAQIEIEPITAAAIEKLLQNLQKPPIYPTGVVSQPYALPSDQKMIHVLLVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ
Homology
[Close]
BLAST of MELO3C028682.jh1 vs. NCBI nr
Match: TYJ96410.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (503), Expect = 5.63e-54
Identity = 98/112 (87.50%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 129 MVSEQSNNETLENNLREAQIEIEPITAAAIEKLLQNLQKPPIYPTGVVSQPYALPSDQKM 188
           MVSEQSNNETLENNL E QIE EP+TAAA+EKLLQNLQKPPIYPTGVV QPYALPSDQK+
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVTAAAMEKLLQNLQKPPIYPTGVVPQPYALPSDQKL 60

Query: 189 IHVLLVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           IH  LVS  WAHAPPPFHVTA PVPFYAPSDVQPSNPSGHPHPHAP  SSGQ
Sbjct: 61  IHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPHAPSTSSGQ 112

[Close]
BLAST of MELO3C028682.jh1 vs. NCBI nr
Match: KAA0056107.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (503), Expect = 5.63e-54
Identity = 98/112 (87.50%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 129 MVSEQSNNETLENNLREAQIEIEPITAAAIEKLLQNLQKPPIYPTGVVSQPYALPSDQKM 188
           MVSEQSNNETLENNL E QIE EP+TAAA+EKLLQNLQKPPIYPTGVV QPYALPSDQK+
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVTAAAMEKLLQNLQKPPIYPTGVVPQPYALPSDQKL 60

Query: 189 IHVLLVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           IH  LVS  WAHAPPPFHVTA PVPFYAPSDVQPSNPSGHPHPHAP  SSGQ
Sbjct: 61  IHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPHAPSTSSGQ 112

[Close]
BLAST of MELO3C028682.jh1 vs. NCBI nr
Match: KAA0047367.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (494), Expect = 8.90e-53
Identity = 98/112 (87.50%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 129 MVSEQSNNETLENNLREAQIEIEPITAAAIEKLLQNLQKPPIYPTGVVSQPYALPSDQKM 188
           MVSEQSNNETLENNL E QIE EP+TAAA+EKLLQNLQKPPIYPTGVV QPYA PSDQKM
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVTAAAMEKLLQNLQKPPIYPTGVVPQPYAPPSDQKM 60

Query: 189 IHVLLVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           IH  LVSD WAHAPPPFHVTA PV FYAPSDVQPSNPS H HPHAPPMSSGQ
Sbjct: 61  IHAPLVSDAWAHAPPPFHVTAHPVHFYAPSDVQPSNPSDHLHPHAPPMSSGQ 112

[Close]
BLAST of MELO3C028682.jh1 vs. NCBI nr
Match: TYK14044.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (494), Expect = 9.02e-53
Identity = 98/112 (87.50%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 129 MVSEQSNNETLENNLREAQIEIEPITAAAIEKLLQNLQKPPIYPTGVVSQPYALPSDQKM 188
           MVSEQSNNETLENNL E QIE EP+TAAA+EKLLQNLQKPPIYPTGVV QPYA PSDQKM
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVTAAAMEKLLQNLQKPPIYPTGVVPQPYAPPSDQKM 60

Query: 189 IHVLLVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           IH  LVSD WAHAPPPFHVTA PV FYAPSDVQPSNPS H HPHAPPMSSGQ
Sbjct: 61  IHAPLVSDAWAHAPPPFHVTAHPVHFYAPSDVQPSNPSDHLHPHAPPMSSGQ 112

[Close]
BLAST of MELO3C028682.jh1 vs. NCBI nr
Match: KAA0059996.1 (putative tRNA pseudouridine synthase [Cucumis melo var. makuwa])

HSP 1 Score: 191 bits (485), Expect = 1.33e-51
Identity = 106/168 (63.10%), Postives = 119/168 (70.83%), Query Frame = 0 

Query: 81  SVWSDAKLVETLYDIYVKPDFSVRAEVLKLYSAIGFHVSLGLLLIAFNMVSEQSNNETLE 140
           S+W ++ ++  L  + ++  FSV   +          V+  LLL  +    EQSNNETLE
Sbjct: 220 SIWGESFMLHQLVALLLRFGFSVVTPL----------VAYILLLAMWEPKFEQSNNETLE 279

Query: 141 NNLREAQIEIEPITAAAI--------EKLLQNLQKPPIYPTGVVSQPYALPSDQKMIHVL 200
           NNL E QIE EP+TAAA+        EKLLQNLQKPPIYPTGVV QPYA PSDQKMIHV 
Sbjct: 280 NNLEETQIETEPVTAAAVDAAVPTAMEKLLQNLQKPPIYPTGVVPQPYAPPSDQKMIHVP 339

Query: 201 LVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           LVS  WAHAPPPFHVTA PV FYAPSDVQPSNPSGHPHPHAPPMSS Q
Sbjct: 340 LVSGAWAHAPPPFHVTAHPVLFYAPSDVQPSNPSGHPHPHAPPMSSEQ 377

[Close]
BLAST of MELO3C028682.jh1 vs. ExPASy TrEMBL
Match: A0A5D3B967 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00370 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 2.73e-54
Identity = 98/112 (87.50%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 129 MVSEQSNNETLENNLREAQIEIEPITAAAIEKLLQNLQKPPIYPTGVVSQPYALPSDQKM 188
           MVSEQSNNETLENNL E QIE EP+TAAA+EKLLQNLQKPPIYPTGVV QPYALPSDQK+
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVTAAAMEKLLQNLQKPPIYPTGVVPQPYALPSDQKL 60

Query: 189 IHVLLVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           IH  LVS  WAHAPPPFHVTA PVPFYAPSDVQPSNPSGHPHPHAP  SSGQ
Sbjct: 61  IHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPHAPSTSSGQ 112

[Close]
BLAST of MELO3C028682.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UNC5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G00700 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 2.73e-54
Identity = 98/112 (87.50%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 129 MVSEQSNNETLENNLREAQIEIEPITAAAIEKLLQNLQKPPIYPTGVVSQPYALPSDQKM 188
           MVSEQSNNETLENNL E QIE EP+TAAA+EKLLQNLQKPPIYPTGVV QPYALPSDQK+
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVTAAAMEKLLQNLQKPPIYPTGVVPQPYALPSDQKL 60

Query: 189 IHVLLVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           IH  LVS  WAHAPPPFHVTA PVPFYAPSDVQPSNPSGHPHPHAP  SSGQ
Sbjct: 61  IHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPHAPSTSSGQ 112

[Close]
BLAST of MELO3C028682.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TZI1 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold754G00160 PE=4 SV=1)

HSP 1 Score: 194 bits (494), Expect = 4.31e-53
Identity = 98/112 (87.50%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 129 MVSEQSNNETLENNLREAQIEIEPITAAAIEKLLQNLQKPPIYPTGVVSQPYALPSDQKM 188
           MVSEQSNNETLENNL E QIE EP+TAAA+EKLLQNLQKPPIYPTGVV QPYA PSDQKM
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVTAAAMEKLLQNLQKPPIYPTGVVPQPYAPPSDQKM 60

Query: 189 IHVLLVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           IH  LVSD WAHAPPPFHVTA PV FYAPSDVQPSNPS H HPHAPPMSSGQ
Sbjct: 61  IHAPLVSDAWAHAPPPFHVTAHPVHFYAPSDVQPSNPSDHLHPHAPPMSSGQ 112

[Close]
BLAST of MELO3C028682.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CSM4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00140 PE=4 SV=1)

HSP 1 Score: 194 bits (494), Expect = 4.37e-53
Identity = 98/112 (87.50%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 129 MVSEQSNNETLENNLREAQIEIEPITAAAIEKLLQNLQKPPIYPTGVVSQPYALPSDQKM 188
           MVSEQSNNETLENNL E QIE EP+TAAA+EKLLQNLQKPPIYPTGVV QPYA PSDQKM
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVTAAAMEKLLQNLQKPPIYPTGVVPQPYAPPSDQKM 60

Query: 189 IHVLLVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           IH  LVSD WAHAPPPFHVTA PV FYAPSDVQPSNPS H HPHAPPMSSGQ
Sbjct: 61  IHAPLVSDAWAHAPPPFHVTAHPVHFYAPSDVQPSNPSDHLHPHAPPMSSGQ 112

[Close]
BLAST of MELO3C028682.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V0I4 (Putative tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00400 PE=4 SV=1)

HSP 1 Score: 191 bits (485), Expect = 6.46e-52
Identity = 106/168 (63.10%), Postives = 119/168 (70.83%), Query Frame = 0 

Query: 81  SVWSDAKLVETLYDIYVKPDFSVRAEVLKLYSAIGFHVSLGLLLIAFNMVSEQSNNETLE 140
           S+W ++ ++  L  + ++  FSV   +          V+  LLL  +    EQSNNETLE
Sbjct: 220 SIWGESFMLHQLVALLLRFGFSVVTPL----------VAYILLLAMWEPKFEQSNNETLE 279

Query: 141 NNLREAQIEIEPITAAAI--------EKLLQNLQKPPIYPTGVVSQPYALPSDQKMIHVL 200
           NNL E QIE EP+TAAA+        EKLLQNLQKPPIYPTGVV QPYA PSDQKMIHV 
Sbjct: 280 NNLEETQIETEPVTAAAVDAAVPTAMEKLLQNLQKPPIYPTGVVPQPYAPPSDQKMIHVP 339

Query: 201 LVSDTWAHAPPPFHVTAQPVPFYAPSDVQPSNPSGHPHPHAPPMSSGQ 240
           LVS  WAHAPPPFHVTA PV FYAPSDVQPSNPSGHPHPHAPPMSS Q
Sbjct: 340 LVSGAWAHAPPPFHVTAHPVLFYAPSDVQPSNPSGHPHPHAPPMSSEQ 377

The following BLAST results are available for this feature:
BLAST of MELO3C028682.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ96410.15.63e-5487.50Beta-galactosidase [Cucumis melo var. makuwa][more]
KAA0056107.15.63e-5487.50Beta-galactosidase [Cucumis melo var. makuwa][more]
KAA0047367.18.90e-5387.50Beta-galactosidase [Cucumis melo var. makuwa][more]
TYK14044.19.02e-5387.50Beta-galactosidase [Cucumis melo var. makuwa][more]
KAA0059996.11.33e-5163.10putative tRNA pseudouridine synthase [Cucumis melo var. makuwa][more]
BLAST of MELO3C028682.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028682.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3B9672.73e-5487.50Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G0... [more]
A0A5A7UNC52.73e-5487.50Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G0... [more]
A0A5A7TZI14.31e-5387.50Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold754G0... [more]
A0A5D3CSM44.37e-5387.50Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G0... [more]
A0A5A7V0I46.46e-5263.10Putative tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of MELO3C028682.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..240

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028682.jh1.t1MELO3C028682.jh1.t1mRNA