MELO3C028680 (gene) Melon (DHL92) v4

Overview
NameMELO3C028680
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionMitogen-activated protein kinase
Locationchr10: 7097861 .. 7100183 (+)
RNA-Seq ExpressionMELO3C028680
SyntenyMELO3C028680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTAAAAACATTTTTGGAAATATTAACTCAATCCACCAAATGATCACCAGAGGGAAAGATAATTATGCTCATCTCTTCAAAAGTGTAAGTATCAGTGCATCGAGATGTGTTGGGGTAATACCAAAGGAGAAGTCTGAGGTAACTATTAGTTTACTTGTTTCCTCGTTCGTCTTTAGAACGTGACTCTTTTACATCTCGAACATGTATTCAAGTTATTTCTAAGCCTTTTTTAGCATATTGAACCTTTTGATTTTGGATGAAAATGATAAATTCTTAGCTGCCAATATTATTTACTTTTTGGTTATGTGATCATATGGACTATCAGTTATAAGAGTGACACACATATATATAATAACTCACTAAGTATCAATATCATCATCCCGGTGGTAATCTATCTACTAGCCCCCTCTAGACTCAAGTTTAAGTCATACTCATTAGAACTTTAAGTCATTTAGCCATTGGGATAAAATGGTGTAATATAGGGTTGAGAAATTGACTAGTCTAGATTTGTCATGTTAGTTTGTTTTGTAAAAGGAAAAACTATGCAGATTTTCTAATTTCCATAAGCTCCACAATAGTTTTAACTAATCAAAACTTACAGATCAAATTCCTGTTACAATTCTGATTTTGAATACTTCATAAACCAAACTTATCAAGACATACCCTCCTCTTGTATATAATCTCTTATATTTTTGAAAAGCTAACCTTGTAGTTTGTGCATACCACACATTTACACAAATAAAGGTATATTCGAACTGTAGTATTGTGGTAAAAATTTCATAACAAACATTATGTATGAGTAATTCTTTGCTAAGGGAGGGAGATACTTCTGTGGGTCAGTTTATTATCTTTGACAAAAAAAAAAAATACATATTTGTTTCTATAATTATTTTGTAAATGAGAACAATTCCTTAAAAACTGTTTGGTGTGAAATGCATATTTGTTTATGCAATTTTAAAGAATAAATGATGCTTCAAATAGATTGTTGGTTGTTGATTGTGTATTTTGTGTTGATATTTTTGTTATGAAATGCAATGGTAGGAAAAGGGAAGGCCTTTAAAGGAAGCTAGAAATAGGTAGGGGTAATTAAGCAGAAGAAGAGTACGGGTGTAGTACTGAGCAAAATGATACAGATGAAAATGTCAATAATTGTAAAACATAAGAAAAATGGAAAGATGGGAAGGGGGGTTTCATAGATGACTACCAAATATGTGAATAGTTTTTAGGAAGAAAGGGAAAAACAAGTTGTTATAAAACTACAAACCAATAAGACATGGATGTGAAAGAAAAATATGTCTTATTCCAATTTAAATTTTCAGGGTCCGCCCACGGTCAGGCTTCTATTCAACAACCACATGTCCCCTCCCCTTCTCCCATTTTATCAAAGGTCCCATCCAAGCCATAATTTGCTTTTGTCACATTCTTTTTAAGGACATTGCAATACATAATTTTCTTTTTTCACATTCTTTTTAAGGACGACACTGCATTTGAGAAGCAAAGTATCCTATTTGCGCTTGCCGTGTAAGATATAGTGCTAATAAATATGTGAGTGCCATTAGTTTTGTTTTTCAAATATTTCTTTTGGCTAATATTAAAGTATTTCTGTTGGAAAAGGATTTGTGTCTGTTTTGGCTAATATTAAAGTATAGTACAACTATTTGTTAAGTGAAGAGAATAAAGAGAACAATTAATCATGTTTAAAACAAGAATTTGAAATTTATATAAAAATATTTCAAATTATATTTAAAAAAGTGGTACGGTTCGAGATGTAATAGTAATCTCAAACCTAATAAGGAAAAAGAGTAAAGATATTTGAAGATCAATAGTGTACTTATGTTTATCAATAATAACTTGAACCATTATGCTAAGTATTTGAACTAGACACTTATCACATTTGGATTTCCGGCTTGTTGAATTTGTTGTCGAATGATTCGGTTTGCTTTGAACCTTTTTTTTGTTAAATAAGCTGGTTTCTATTTTTTACATTTTTGTTTTGTTTGTGATGTTTACTGAATTATGTAGGTTTCAGCTGCGAGGACTTGCAATTGTATATTTATATATATTTTTTGCGTCAGCAAAGGCAGCATGACATTGAGTTTAGGAAAACTGATAATGAACAGAGATAGAGGTAACAACATTTTCTAACGTTAATGTATTGTAGGACATTACCAAAGGCTTCAATTATGAGTAAATTCGTATGACTATGCTAAGAAATTTATGAAATTATGCTTTGTTTGGTTATCTTATGGATATTCAGCAAGGCAGCGTGACATTGAGTTTAGGAGTATTCTTTTTCAGGTTATAGATAGTGAACATA

mRNA sequence

ATGGCTTCTAAAAACATTTTTGGAAATATTAACTCAATCCACCAAATGATCACCAGAGGGAAAGATAATTATGCTCATCTCTTCAAAAGTGTAAGTATCAGTGCATCGAGATGTGTTGGGGTAATACCAAAGGAGAAGTCTGAGGACGACACTGCATTTGAGAAGCAAAGTATCCTATTTGCGCTTGCCGTCAAAGGCAGCATGACATTGAGTTTAGGAAAACTGATAATGAACAGAGATAGAGCAAGGCAGCGTGACATTGAGTTTAGGAGTATTCTTTTTCAGGTTATAGATAGTGAACATA

Coding sequence (CDS)

ATGGCTTCTAAAAACATTTTTGGAAATATTAACTCAATCCACCAAATGATCACCAGAGGGAAAGATAATTATGCTCATCTCTTCAAAAGTGTAAGTATCAGTGCATCGAGATGTGTTGGGGTAATACCAAAGGAGAAGTCTGAGGACGACACTGCATTTGAGAAGCAAAGTATCCTATTTGCGCTTGCCGTCAAAGGCAGCATGACATTGAGTTTAGGAAAACTGATAATGAACAGAGATAGAGCAAGGCAGCGTGACATTGAGTTTAGGAGTATTCTTTTTCAGGTTATAGATAGTGAACAT

Protein sequence

MASKNIFGNINSIHQMITRGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAVKGSMTLSLGKLIMNRDRARQRDIEFRSILFQVIDSEH
Homology
[Close]
BLAST of MELO3C028680 vs. NCBI nr
Match: TYK19349.1 (mitogen-activated protein kinase 9 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 3.7e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAV 65
           R KDNYA LFKS SISASRCVGVIPKEKSEDDTAFEKQSILFALAV
Sbjct: 147 RRKDNYADLFKSASISASRCVGVIPKEKSEDDTAFEKQSILFALAV 192

[Close]
BLAST of MELO3C028680 vs. NCBI nr
Match: XP_016902811.1 (PREDICTED: mitogen-activated protein kinase 9-like [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-05
Identity = 37/72 (51.39%), Postives = 44/72 (61.11%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAVKGSMTLSLGKLIMN 78
           R KDNYAHLFKS SISASRCVGVIPKEKSE          +    ++G   L++  L + 
Sbjct: 116 RRKDNYAHLFKSASISASRCVGVIPKEKSE----------MIRFRLRG---LAIVYLYVF 174

Query: 79  RDRARQRDIEFR 91
             + RQ DI FR
Sbjct: 176 LIQQRQHDIVFR 174

[Close]
BLAST of MELO3C028680 vs. NCBI nr
Match: XP_008463378.1 (PREDICTED: mitogen-activated protein kinase 9 isoform X3 [Cucumis melo])

HSP 1 Score: 57.4 bits (137), Expect = 8.4e-05
Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAVK 66
           RGKDN AHL KS SISASRCVGVIPKEKSE +    K   +  L+ K
Sbjct: 427 RGKDNCAHLLKSASISASRCVGVIPKEKSEVEETEVKNEAVDGLSKK 473

[Close]
BLAST of MELO3C028680 vs. NCBI nr
Match: XP_008463177.1 (PREDICTED: mitogen-activated protein kinase 9 isoform X1 [Cucumis melo] >XP_008463242.1 PREDICTED: mitogen-activated protein kinase 9 isoform X1 [Cucumis melo])

HSP 1 Score: 57.4 bits (137), Expect = 8.4e-05
Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAVK 66
           RGKDN AHL KS SISASRCVGVIPKEKSE +    K   +  L+ K
Sbjct: 433 RGKDNCAHLLKSASISASRCVGVIPKEKSEVEETEVKNEAVDGLSKK 479

[Close]
BLAST of MELO3C028680 vs. NCBI nr
Match: TYJ99026.1 (mitogen-activated protein kinase 9 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 8.4e-05
Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAVK 66
           RGKDN AHL KS SISASRCVGVIPKEKSE +    K   +  L+ K
Sbjct: 448 RGKDNCAHLLKSASISASRCVGVIPKEKSEVEETEVKNEAVDGLSKK 494

[Close]
BLAST of MELO3C028680 vs. ExPASy TrEMBL
Match: A0A5D3D716 (Mitogen-activated protein kinase 9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00700 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.8e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAV 65
           R KDNYA LFKS SISASRCVGVIPKEKSEDDTAFEKQSILFALAV
Sbjct: 147 RRKDNYADLFKSASISASRCVGVIPKEKSEDDTAFEKQSILFALAV 192

[Close]
BLAST of MELO3C028680 vs. ExPASy TrEMBL
Match: A0A1S4E3K5 (mitogen-activated protein kinase 9-like OS=Cucumis melo OX=3656 GN=LOC103500537 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 37/72 (51.39%), Postives = 44/72 (61.11%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAVKGSMTLSLGKLIMN 78
           R KDNYAHLFKS SISASRCVGVIPKEKSE          +    ++G   L++  L + 
Sbjct: 116 RRKDNYAHLFKSASISASRCVGVIPKEKSE----------MIRFRLRG---LAIVYLYVF 174

Query: 79  RDRARQRDIEFR 91
             + RQ DI FR
Sbjct: 176 LIQQRQHDIVFR 174

[Close]
BLAST of MELO3C028680 vs. ExPASy TrEMBL
Match: A0A1S3CIR3 (Mitogen-activated protein kinase OS=Cucumis melo OX=3656 GN=LOC103501358 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-05
Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAVK 66
           RGKDN AHL KS SISASRCVGVIPKEKSE +    K   +  L+ K
Sbjct: 433 RGKDNCAHLLKSASISASRCVGVIPKEKSEVEETEVKNEAVDGLSKK 479

[Close]
BLAST of MELO3C028680 vs. ExPASy TrEMBL
Match: A0A5D3BIW2 (Mitogen-activated protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002300 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-05
Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAVK 66
           RGKDN AHL KS SISASRCVGVIPKEKSE +    K   +  L+ K
Sbjct: 448 RGKDNCAHLLKSASISASRCVGVIPKEKSEVEETEVKNEAVDGLSKK 494

[Close]
BLAST of MELO3C028680 vs. ExPASy TrEMBL
Match: A0A1S3CIZ1 (Mitogen-activated protein kinase OS=Cucumis melo OX=3656 GN=LOC103501358 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-05
Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 19  RGKDNYAHLFKSVSISASRCVGVIPKEKSEDDTAFEKQSILFALAVK 66
           RGKDN AHL KS SISASRCVGVIPKEKSE +    K   +  L+ K
Sbjct: 432 RGKDNCAHLLKSASISASRCVGVIPKEKSEVEETEVKNEAVDGLSKK 478

[Close]
BLAST of MELO3C028680 vs. TAIR 10
Match: AT3G13870.2 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 42.0 bits (97), Expect = 3.4e-04
Identity = 26/74 (35.14%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 36 SRCVGVIP------------KEKSEDDTAFEKQSILFALAVKGSMTLSLGKLIMNRDRAR 95
          +RC G+ P            +E+ EDDTAFEKQS LFALAV   + +++    + R++A 
Sbjct: 17 ARCAGIEPCTVVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAA 76

Query: 96 QRDIEFRSILFQVI 98
           + +     +FQV+
Sbjct: 77 NKPL--LKTVFQVM 88

[Close]
BLAST of MELO3C028680 vs. TAIR 10
Match: AT3G13870.1 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 42.0 bits (97), Expect = 3.4e-04
Identity = 26/74 (35.14%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 36  SRCVGVIP------------KEKSEDDTAFEKQSILFALAVKGSMTLSLGKLIMNRDRAR 95
           +RC G+ P            +E+ EDDTAFEKQS LFALAV   + +++    + R++A 
Sbjct: 81  ARCAGIEPCTVVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAA 140

Query: 96  QRDIEFRSILFQVI 98
            + +     +FQV+
Sbjct: 141 NKPL--LKTVFQVM 152

[Close]
BLAST of MELO3C028680 vs. TAIR 10
Match: AT1G72960.1 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 41.6 bits (96), Expect = 4.4e-04
Identity = 25/74 (33.78%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 36  SRCVGVIP------------KEKSEDDTAFEKQSILFALAVKGSMTLSLGKLIMNRDRAR 95
           +RC G+ P            +E+ EDDTAFEKQS LFALA+   + +++    + R++A 
Sbjct: 86  ARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAA 145

Query: 96  QRDIEFRSILFQVI 98
            + +     +FQV+
Sbjct: 146 NKPL--LKTVFQVM 157

[Close]
BLAST of MELO3C028680 vs. TAIR 10
Match: AT5G45160.1 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 41.2 bits (95), Expect = 5.8e-04
Identity = 30/101 (29.70%), Postives = 52/101 (51.49%), Query Frame = 0 

Query: 10  INSIHQMITRGKDNYAHLFKSV-SISASRCVGVIP------------KEKSEDDTAFEKQ 69
           +N + +   R  D +A   ++   I  +RCVG+ P            +E+ EDDT FEKQ
Sbjct: 57  LNHLFKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRERGEDDTTFEKQ 116

Query: 70  SILFALAVKGSMTLSLGKLIMNRDRARQRDIEFRSILFQVI 98
           S LFA+AV   + +++    + R++A  + +     +FQV+
Sbjct: 117 SALFAIAVADIVLINMWCHDIGREQAANKPL--LKTVFQVM 155

The following BLAST results are available for this feature:
BLAST of MELO3C028680 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK19349.13.7e-1393.48mitogen-activated protein kinase 9 isoform X2 [Cucumis melo var. makuwa][more]
XP_016902811.12.2e-0551.39PREDICTED: mitogen-activated protein kinase 9-like [Cucumis melo][more]
XP_008463378.18.4e-0563.83PREDICTED: mitogen-activated protein kinase 9 isoform X3 [Cucumis melo][more]
XP_008463177.18.4e-0563.83PREDICTED: mitogen-activated protein kinase 9 isoform X1 [Cucumis melo] >XP_0084... [more]
TYJ99026.18.4e-0563.83mitogen-activated protein kinase 9 isoform X2 [Cucumis melo var. makuwa][more]
BLAST of MELO3C028680 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D7161.8e-1393.48Mitogen-activated protein kinase 9 isoform X2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S4E3K51.1e-0551.39mitogen-activated protein kinase 9-like OS=Cucumis melo OX=3656 GN=LOC103500537 ... [more]
A0A1S3CIR34.1e-0563.83Mitogen-activated protein kinase OS=Cucumis melo OX=3656 GN=LOC103501358 PE=4 SV... [more]
A0A5D3BIW24.1e-0563.83Mitogen-activated protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CIZ14.1e-0563.83Mitogen-activated protein kinase OS=Cucumis melo OX=3656 GN=LOC103501358 PE=4 SV... [more]
BLAST of MELO3C028680 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13870.23.4e-0435.14Root hair defective 3 GTP-binding protein (RHD3) [more]
AT3G13870.13.4e-0435.14Root hair defective 3 GTP-binding protein (RHD3) [more]
AT1G72960.14.4e-0433.78Root hair defective 3 GTP-binding protein (RHD3) [more]
AT5G45160.15.8e-0429.70Root hair defective 3 GTP-binding protein (RHD3) [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028680.1MELO3C028680.1mRNA