Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGTCAACCTCAACCCATGTCCCGAGGCATGTCTAAACGAAAGAGGAGGAGGATACTCTTGTGGAGTGTTTAATGGAGTTGGTGTCAATAGGGGATGTAAATCTGATAATGGTACGTTCCGGCCAGGTTACCTGACCCAGTTGGTATGCATGATGATGGAGAAACTACTTGGATGTTGTGTCCGCGCAACGACTGTAATTGACTGTAGAATAAAGACACTGAAGCAGACATTCTAGGCCATCGCCGAAATGCGAGGGCCAACGTGCAGTGGCTTTGGGTAGAACGATGAAGAGAAATGCATAATTGTGGACAAATAATTATTTGATAATTGGGTTAGGTAAGGAAAATAATATAAACATCACACGACGTTTGCAATGTACATTTACTTCACAATTTTTCTATTTGCACTCATAAGTGATCCTCCCCACAGTTGCATCCTGCAGTGAAGGGACCCCTGAACAAATCGTTTTCGTATTACGACGAACTTACATATGTGTTCGGTCGTGATAAGGCAATGGGTCGGTTCGCTAAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGGTATGAGGGATTTGACATGGCAGATGGAAACGAGGAGTTTCTACCGTGTACAGCCAAGGGATTGACATGTCGCAGGATAATGTACGCGCATCACTACCTTCTCGTGCTTCAGAGGGTAGGACCGAATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAGAGGTGGATGTTGAAGGCATACATTTGACACTCGACCAAACAAACGAGAAACTCAGGATGATTGCGGAGTGGCCTGTACACGCCCTTGCTAATGACAACCATGTGCGCATGGAATTCTTCCATATATTGCGTGAGATGCTGGAACTAACGAGTTTGAATAGGGCATTATTGCAAAGGAATCTTCTGTCTTGTATGGACGACCTTCGGGGTTTCGTTCTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTTCTCTTACGAGACACGACGAGATAG
mRNA sequence
TATGTCAACCTCAACCCATGTCCCGAGGCATGTCTAAACGAAAGAGGAGGAGGATACTCTTGTGGAGTGTTTAATGGAGTTGGTGTCAATAGGGGATGTAAATCTGATAATGGTACGTTCCGGCCAGGTTACCTGACCCAGTTGGTATGCATGATGATGGAGAAACTACTTGGATGTTGTGTCCGCGCAACGACTTTGCATCCTGCAGTGAAGGGACCCCTGAACAAATCGTTTTCGTATTACGACGAACTTACATATGTGTTCGGTCGTGATAAGGCAATGGGTCGGTTCGCTAAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGATGGAAACGAGGAGTTTCTACCGTGTACAGCCAAGGGATTGACATGTCGCAGGATAATGTACGCGCATCACTACCTTCTCGTGCTTCAGAGGGTAGGACCGAATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAGAGGTGGATGTTGAAGGCATACATTTGACACTCGACCAAACAAACGAGAAACTCAGGATGATTGCGGAGTGGCCTGTACACGCCCTTGCTAATGACAACCATGTGCGCATGGAATTCTTCCATATATTGCGTGAGATGCTGGAACTAACGAGTTTGAATAGGGCATTATTGCAAAGGAATCTTCTGTCTTGTATGGACGACCTTCGGGGTTTCGTTCTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTTCTCTTACGAGACACGACGAGATAG
Coding sequence (CDS)
TATGTCAACCTCAACCCATGTCCCGAGGCATGTCTAAACGAAAGAGGAGGAGGATACTCTTGTGGAGTGTTTAATGGAGTTGGTGTCAATAGGGGATGTAAATCTGATAATGGTACGTTCCGGCCAGGTTACCTGACCCAGTTGGTATGCATGATGATGGAGAAACTACTTGGATGTTGTGTCCGCGCAACGACTTTGCATCCTGCAGTGAAGGGACCCCTGAACAAATCGTTTTCGTATTACGACGAACTTACATATGTGTTCGGTCGTGATAAGGCAATGGGTCGGTTCGCTAAGACATTCGTCGACGTGGGGTCTAACGAGCCTGGCGGATGGAAACGAGGAGTTTCTACCGTGTACAGCCAAGGGATTGACATGTCGCAGGATAATGTACGCGCATCACTACCTTCTCGTGCTTCAGAGGGTAGGACCGAATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAGAGGTGGATGTTGAAGGCATACATTTGACACTCGACCAAACAAACGAGAAACTCAGGATGATTGCGGAGTGGCCTGTACACGCCCTTGCTAATGACAACCATGTGCGCATGGAATTCTTCCATATATTGCGTGAGATGCTGGAACTAACGAGTTTGAATAGGGCATTATTGCAAAGGAATCTTCTGTCTTGTATGGACGACCTTCGGGGTTTCGTTCTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTTCTCTTACGAGACACGACGAGATAG
Protein sequence
YVNLNPCPEACLNERGGGYSCGVFNGVGVNRGCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTLHPAVKGPLNKSFSYYDELTYVFGRDKAMGRFAKTFVDVGSNEPGGWKRGVSTVYSQGIDMSQDNVRASLPSRASEGRTESSGSKRKRGSQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREMLELTSLNRALLQRNLLSCMDDLRGFVLMPEDEREGFCRVLLRDTTR
Homology
BLAST of MELO3C028659 vs. NCBI nr
Match:
KAA0059933.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24879.1 retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 318.2 bits (814), Expect = 6.5e-83
Identity = 168/226 (74.34%), Postives = 183/226 (80.97%), Query Frame = 0
Query: 32 GCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTLHPAVKGPLNKSFSYYDELTYVFGRD 91
G KS+NGTF+PGYL QLV MM+E+L GC VRATT HPA K LNK F YYDELTYVFG D
Sbjct: 32 GWKSNNGTFQPGYLAQLVRMMVEELPGCRVRATTSHPATKRLLNKPFLYYDELTYVFGPD 91
Query: 92 KAMGRFAKTFVDVGSNEPGGWK--------RGVSTVYSQGIDMSQDNVRASLPSRASEGR 151
+A G+FA+TF DVGSNEPGG++ +VYSQGIDMS D+VRAS PS ASEGR
Sbjct: 92 RATGQFAETFTDVGSNEPGGYEGFDMADGNEEFPSVYSQGIDMSLDDVRASRPSCASEGR 151
Query: 152 TESSGSKRKRGSQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREM 211
T SSGSKRKRGSQREVDVEGIHL LDQTNE+LRMI EWP L NDNHVR EFF IL EM
Sbjct: 152 TGSSGSKRKRGSQREVDVEGIHLALDQTNEQLRMIEEWPARVLVNDNHVRTEFFRILCEM 211
Query: 212 LELTSLNRALLQRNLLSCMDDLRGFVLMPEDEREGFCRVLLRDTTR 250
ELTSL+RALLQR+LLS MDDLRGF+LMPEDEREGF RVLLRD TR
Sbjct: 212 PELTSLDRALLQRHLLSRMDDLRGFILMPEDEREGFSRVLLRDMTR 257
BLAST of MELO3C028659 vs. NCBI nr
Match:
KAA0060539.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 311.6 bits (797), Expect = 6.1e-81
Identity = 174/276 (63.04%), Postives = 185/276 (67.03%), Query Frame = 0
Query: 31 RGCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTL------------------------ 90
RG KSDNGTFRPGYL QLV MM EKL GC VRATT+
Sbjct: 31 RGWKSDNGTFRPGYLAQLVRMMAEKLHGCQVRATTVIDCRIKTLKRTFQTIAEMRGPTCS 90
Query: 91 ------------------------HPAVKGPLNKSFSYYDELTYVFGRDKAMGRFAKTFV 150
HPA KG LNKSF YYDELTYVFGRD+A GRFA+TF
Sbjct: 91 GFGWSDEEKCIVAEKELFDNWVRSHPAAKGLLNKSFPYYDELTYVFGRDRATGRFAETFA 150
Query: 151 DVGSNEPGG---------WKRGVSTVYSQGIDMSQDNVRASLPSRASEGRTESSGSKRKR 210
DVGSNEPGG VYSQG+D+SQD+VRAS PSRASEG+T SSGSKRKR
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGKTGSSGSKRKR 210
Query: 211 GSQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREMLELTSLNRAL 250
GSQR+ DVE IHL LDQTNE+LR IAEWP LANDNHVR EFF ILREM ELTSL+RAL
Sbjct: 211 GSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270
BLAST of MELO3C028659 vs. NCBI nr
Match:
KAA0047011.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 309.3 bits (791), Expect = 3.0e-80
Identity = 172/275 (62.55%), Postives = 184/275 (66.91%), Query Frame = 0
Query: 32 GCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTL------------------------- 91
G KSDNGTFRPGYL QLVCMM EKL GC VRATT+
Sbjct: 3 GWKSDNGTFRPGYLAQLVCMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIVEMRGPTCSG 62
Query: 92 -----------------------HPAVKGPLNKSFSYYDELTYVFGRDKAMGRFAKTFVD 151
HP KG LN+ F YYDELTYVFGRD+A GRFA+TF D
Sbjct: 63 FGWNDEEKCIVAEKELFDNWVRSHPTAKGLLNQPFPYYDELTYVFGRDRATGRFAETFAD 122
Query: 152 VGSNEPGG---------WKRGVSTVYSQGIDMSQDNVRASLPSRASEGRTESSGSKRKRG 211
VGSNE GG + VYSQG+D+SQD+VRAS PSRASEGRT SSGSKRKRG
Sbjct: 123 VGSNESGGGYDRFDMGDGNKDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRG 182
Query: 212 SQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREMLELTSLNRALL 250
SQR+ DVE IHL LDQTNE+LR IAEWP LANDNHVR EFF ILREM ELTSL+RALL
Sbjct: 183 SQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALL 242
BLAST of MELO3C028659 vs. NCBI nr
Match:
KAA0038975.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 307.8 bits (787), Expect = 8.8e-80
Identity = 172/275 (62.55%), Postives = 185/275 (67.27%), Query Frame = 0
Query: 32 GCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTL------------------------- 91
G KSDNGTFRPGYL QLV MM EKL GC VRATT+
Sbjct: 32 GWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSG 91
Query: 92 -----------------------HPAVKGPLNKSFSYYDELTYVFGRDKAMGRFAKTFVD 151
HPA KG LNK F YYDELTYVFGRD+A GRFA+TF D
Sbjct: 92 FGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFAD 151
Query: 152 VGSNEPGG---------WKRGVSTVYSQGIDMSQDNVRASLPSRASEGRTESSGSKRKRG 211
VGSNEPGG S VYSQG+D+SQD+VRAS PSRASEGRT SSGSKRKRG
Sbjct: 152 VGSNEPGGGYDRFDMGDGNEDFSPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRG 211
Query: 212 SQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREMLELTSLNRALL 250
SQR+ ++E IHL LDQTNE+LR IAEWP LANDNHVR EFF ILREM ELTSL+RALL
Sbjct: 212 SQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALL 271
BLAST of MELO3C028659 vs. NCBI nr
Match:
KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 307.4 bits (786), Expect = 1.1e-79
Identity = 172/275 (62.55%), Postives = 184/275 (66.91%), Query Frame = 0
Query: 32 GCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTL------------------------- 91
G KSDNGTFRPGYL QLV MM EKL GC VRATT+
Sbjct: 32 GWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSG 91
Query: 92 -----------------------HPAVKGPLNKSFSYYDELTYVFGRDKAMGRFAKTFVD 151
HPA KG LNK F YYDELTYVFGRD+A GRFA+TF D
Sbjct: 92 FGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFAD 151
Query: 152 VGSNEPGG---------WKRGVSTVYSQGIDMSQDNVRASLPSRASEGRTESSGSKRKRG 211
VGSNEPGG VYSQG+D+SQD+VRAS PSRASEGRT SSGSKRKRG
Sbjct: 152 VGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRG 211
Query: 212 SQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREMLELTSLNRALL 250
SQR+ ++E IHL LDQTNE+LR IAEWP LANDNHVR EFF ILREM ELTSL+RALL
Sbjct: 212 SQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALL 271
BLAST of MELO3C028659 vs. ExPASy TrEMBL
Match:
A0A5A7UVE5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001500 PE=4 SV=1)
HSP 1 Score: 318.2 bits (814), Expect = 3.1e-83
Identity = 168/226 (74.34%), Postives = 183/226 (80.97%), Query Frame = 0
Query: 32 GCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTLHPAVKGPLNKSFSYYDELTYVFGRD 91
G KS+NGTF+PGYL QLV MM+E+L GC VRATT HPA K LNK F YYDELTYVFG D
Sbjct: 32 GWKSNNGTFQPGYLAQLVRMMVEELPGCRVRATTSHPATKRLLNKPFLYYDELTYVFGPD 91
Query: 92 KAMGRFAKTFVDVGSNEPGGWK--------RGVSTVYSQGIDMSQDNVRASLPSRASEGR 151
+A G+FA+TF DVGSNEPGG++ +VYSQGIDMS D+VRAS PS ASEGR
Sbjct: 92 RATGQFAETFTDVGSNEPGGYEGFDMADGNEEFPSVYSQGIDMSLDDVRASRPSCASEGR 151
Query: 152 TESSGSKRKRGSQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREM 211
T SSGSKRKRGSQREVDVEGIHL LDQTNE+LRMI EWP L NDNHVR EFF IL EM
Sbjct: 152 TGSSGSKRKRGSQREVDVEGIHLALDQTNEQLRMIEEWPARVLVNDNHVRTEFFRILCEM 211
Query: 212 LELTSLNRALLQRNLLSCMDDLRGFVLMPEDEREGFCRVLLRDTTR 250
ELTSL+RALLQR+LLS MDDLRGF+LMPEDEREGF RVLLRD TR
Sbjct: 212 PELTSLDRALLQRHLLSRMDDLRGFILMPEDEREGFSRVLLRDMTR 257
BLAST of MELO3C028659 vs. ExPASy TrEMBL
Match:
A0A5A7V480 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004010 PE=4 SV=1)
HSP 1 Score: 311.6 bits (797), Expect = 2.9e-81
Identity = 174/276 (63.04%), Postives = 185/276 (67.03%), Query Frame = 0
Query: 31 RGCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTL------------------------ 90
RG KSDNGTFRPGYL QLV MM EKL GC VRATT+
Sbjct: 31 RGWKSDNGTFRPGYLAQLVRMMAEKLHGCQVRATTVIDCRIKTLKRTFQTIAEMRGPTCS 90
Query: 91 ------------------------HPAVKGPLNKSFSYYDELTYVFGRDKAMGRFAKTFV 150
HPA KG LNKSF YYDELTYVFGRD+A GRFA+TF
Sbjct: 91 GFGWSDEEKCIVAEKELFDNWVRSHPAAKGLLNKSFPYYDELTYVFGRDRATGRFAETFA 150
Query: 151 DVGSNEPGG---------WKRGVSTVYSQGIDMSQDNVRASLPSRASEGRTESSGSKRKR 210
DVGSNEPGG VYSQG+D+SQD+VRAS PSRASEG+T SSGSKRKR
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGKTGSSGSKRKR 210
Query: 211 GSQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREMLELTSLNRAL 250
GSQR+ DVE IHL LDQTNE+LR IAEWP LANDNHVR EFF ILREM ELTSL+RAL
Sbjct: 211 GSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270
BLAST of MELO3C028659 vs. ExPASy TrEMBL
Match:
A0A5A7U086 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G002100 PE=4 SV=1)
HSP 1 Score: 309.3 bits (791), Expect = 1.5e-80
Identity = 172/275 (62.55%), Postives = 184/275 (66.91%), Query Frame = 0
Query: 32 GCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTL------------------------- 91
G KSDNGTFRPGYL QLVCMM EKL GC VRATT+
Sbjct: 3 GWKSDNGTFRPGYLAQLVCMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIVEMRGPTCSG 62
Query: 92 -----------------------HPAVKGPLNKSFSYYDELTYVFGRDKAMGRFAKTFVD 151
HP KG LN+ F YYDELTYVFGRD+A GRFA+TF D
Sbjct: 63 FGWNDEEKCIVAEKELFDNWVRSHPTAKGLLNQPFPYYDELTYVFGRDRATGRFAETFAD 122
Query: 152 VGSNEPGG---------WKRGVSTVYSQGIDMSQDNVRASLPSRASEGRTESSGSKRKRG 211
VGSNE GG + VYSQG+D+SQD+VRAS PSRASEGRT SSGSKRKRG
Sbjct: 123 VGSNESGGGYDRFDMGDGNKDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRG 182
Query: 212 SQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREMLELTSLNRALL 250
SQR+ DVE IHL LDQTNE+LR IAEWP LANDNHVR EFF ILREM ELTSL+RALL
Sbjct: 183 SQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALL 242
BLAST of MELO3C028659 vs. ExPASy TrEMBL
Match:
A0A5A7TC56 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00560 PE=4 SV=1)
HSP 1 Score: 307.8 bits (787), Expect = 4.2e-80
Identity = 172/275 (62.55%), Postives = 185/275 (67.27%), Query Frame = 0
Query: 32 GCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTL------------------------- 91
G KSDNGTFRPGYL QLV MM EKL GC VRATT+
Sbjct: 32 GWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSG 91
Query: 92 -----------------------HPAVKGPLNKSFSYYDELTYVFGRDKAMGRFAKTFVD 151
HPA KG LNK F YYDELTYVFGRD+A GRFA+TF D
Sbjct: 92 FGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFAD 151
Query: 152 VGSNEPGG---------WKRGVSTVYSQGIDMSQDNVRASLPSRASEGRTESSGSKRKRG 211
VGSNEPGG S VYSQG+D+SQD+VRAS PSRASEGRT SSGSKRKRG
Sbjct: 152 VGSNEPGGGYDRFDMGDGNEDFSPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRG 211
Query: 212 SQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREMLELTSLNRALL 250
SQR+ ++E IHL LDQTNE+LR IAEWP LANDNHVR EFF ILREM ELTSL+RALL
Sbjct: 212 SQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALL 271
BLAST of MELO3C028659 vs. ExPASy TrEMBL
Match:
A0A5A7SK51 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00260 PE=4 SV=1)
HSP 1 Score: 307.4 bits (786), Expect = 5.5e-80
Identity = 176/284 (61.97%), Postives = 186/284 (65.49%), Query Frame = 0
Query: 23 VFNGVGVNRGCKSDNGTFRPGYLTQLVCMMMEKLLGCCVRATTL---------------- 82
+FNG GV G KSDNGTFR GYL QLV MM EKL GC VRATT+
Sbjct: 1 MFNGAGVMGGWKSDNGTFRLGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIA 60
Query: 83 --------------------------------HPAVKGPLNKSFSYYDELTYVFGRDKAM 142
HPA KG L K F YYDELTYVFGRD+A
Sbjct: 61 EMRGSACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLKKPFPYYDELTYVFGRDRAT 120
Query: 143 GRFAKTFVDVGSNEPGGW---------KRGVSTVYSQGIDMSQDNVRASLPSRASEGRTE 202
GRFA+TF DVGSNEPGG VYSQGID+SQD+VRAS PSRASEGRT
Sbjct: 121 GRFAETFTDVGSNEPGGGYDIFDMGDENEDFPPVYSQGIDLSQDDVRASQPSRASEGRTG 180
Query: 203 SSGSKRKRGSQREVDVEGIHLTLDQTNEKLRMIAEWPVHALANDNHVRMEFFHILREMLE 250
SSGSKRKRGSQR DVE IHL L+QTNE+LR IAEW LANDNHVR EFF ILREM E
Sbjct: 181 SSGSKRKRGSQRYFDVEAIHLALNQTNEQLRQIAEWLARNLANDNHVRTEFFRILREMPE 240
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0059933.1 | 6.5e-83 | 74.34 | retrotransposon protein [Cucumis melo var. makuwa] >TYK24879.1 retrotransposon p... | [more] |
KAA0060539.1 | 6.1e-81 | 63.04 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0047011.1 | 3.0e-80 | 62.55 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0038975.1 | 8.8e-80 | 62.55 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0032766.1 | 1.1e-79 | 62.55 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UVE5 | 3.1e-83 | 74.34 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7V480 | 2.9e-81 | 63.04 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7U086 | 1.5e-80 | 62.55 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7TC56 | 4.2e-80 | 62.55 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7SK51 | 5.5e-80 | 61.97 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |