Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCGTACGCATCGAGCCCGTGCAACGCTCGGCTATCCGCGCCCTTACGCTGCATTAAAGCAAGCAGGGTCGCAGAGTCGCCGCGCGAGGCCGAGCACGGAACGTCGTGCGCGCGCTCGATATGAGCATTGTGTAACCCACATGAACATTGCAACCGAAACACCGTCATTGTTATGGGACGAGCCCTTTCGTCAAACGGGGATCGATCGCAGCATGTCCAGTCTCGACAGAGGAAAGCATGCCGAGAACACGCCCGCAACGAGGTGCAAGCATTATCCAAGCAAGCCCATCCCCCACCTCACCGCACATCCCGCTCTCTATCCCCGCCCGACGTAG mRNA sequence
ATGCGCCGTACGCATCGAGCCCGTGCAACGCTCGGCTATCCGCGCCCTTACGCTGCATTAAAGCAAGCAGGGTCGCAGAGTCGCCGCGCGAGGCCGAGCACGGAACGTCGTGCGCGCGCTCGATATGAGCATTGTGTAACCCACATGAACATTGCAACCGAAACACCGTCATTGTTATGGGACGAGCCCTTTCGTCAAACGGGGATCGATCGCAGCATGTCCAGTCTCGACAGAGGAAAGCATGCCGAGAACACGCCCGCAACGAGGTGCAAGCATTATCCAAGCAAGCCCATCCCCCACCTCACCGCACATCCCGCTCTCTATCCCCGCCCGACGTAG Coding sequence (CDS)
ATGCGCCGTACGCATCGAGCCCGTGCAACGCTCGGCTATCCGCGCCCTTACGCTGCATTAAAGCAAGCAGGGTCGCAGAGTCGCCGCGCGAGGCCGAGCACGGAACGTCGTGCGCGCGCTCGATATGAGCATTGTGTAACCCACATGAACATTGCAACCGAAACACCGTCATTGTTATGGGACGAGCCCTTTCGTCAAACGGGGATCGATCGCAGCATGTCCAGTCTCGACAGAGGAAAGCATGCCGAGAACACGCCCGCAACGAGGTGCAAGCATTATCCAAGCAAGCCCATCCCCCACCTCACCGCACATCCCGCTCTCTATCCCCGCCCGACGTAG Protein sequence
MRRTHRARATLGYPRPYAALKQAGSQSRRARPSTERRARARYEHCVTHMNIATETPSLLWDEPFRQTGIDRSMSSLDRGKHAENTPATRCKHYPSKPIPHLTAHPALYPRPT
Homology
BLAST of MELO3C028525 vs. NCBI nr
Match:
TYK03168.1 (hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa])
HSP 1 Score: 100.1 bits (248), Expect = 1.2e-17
Identity = 51/73 (69.86%), Postives = 56/73 (76.71%), Query Frame = 0
Query: 28 RRARPSTERRA----RARYEHCVTHMNIATETPSLLWDEPFRQTGIDRSMSSLDRGKHAE 87 R R + + RA RARYEHCVTH+ IATETPSLLWDEPFRQ GID SMSSLDRGKHA+ Sbjct: 33 RGCRVAAQGRARNVVRARYEHCVTHVKIATETPSLLWDEPFRQKGIDCSMSSLDRGKHAK 92 Query: 88 NTPATRCKHYPSK 97 NTP TR H S+ Sbjct: 93 NTPVTRSNHKTSR 105
BLAST of MELO3C028525 vs. ExPASy TrEMBL
Match:
A0A5D3BW21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00500 PE=4 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 6.0e-18
Identity = 51/73 (69.86%), Postives = 56/73 (76.71%), Query Frame = 0
Query: 28 RRARPSTERRA----RARYEHCVTHMNIATETPSLLWDEPFRQTGIDRSMSSLDRGKHAE 87 R R + + RA RARYEHCVTH+ IATETPSLLWDEPFRQ GID SMSSLDRGKHA+ Sbjct: 33 RGCRVAAQGRARNVVRARYEHCVTHVKIATETPSLLWDEPFRQKGIDCSMSSLDRGKHAK 92 Query: 88 NTPATRCKHYPSK 97 NTP TR H S+ Sbjct: 93 NTPVTRSNHKTSR 105
The following BLAST results are available for this feature:
Match Name E-value Identity Description
TYK03168.1 1.2e-17 69.86 hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5D3BW21 6.0e-18 69.86 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
A T G C G C C G T A C G C A T C G A G C C C G T G C A A C G C T C G G C T A T C C G C G C C C T T A C G C T G C A T T A A A G C A A G C A G G G T C G C A G A G T C G C C G C G C G A G G C C G A G C A C G G A A C G T C G T G C G C G C G C T C G A T A T G A G C A T T G T G T A A C C C A C A T G A A C A T T G C A A C C G A A A C A C C G T C A T T G T T A T G G G A C G A G C C C T T T C G T C A A A C G G G G A T C G A T C G C A G C A T G T C C A G T C T C G A C A G A G G A A A G C A T G C C G A G A A C A C G C C C G C A A C G A G G T G C A A G C A T T A T C C A A G C A A G C C C A T C C C C C A C C T C A C C G C A C A T C C C G C T C T C T A T C C C C G C C C G A C G T A G 50 100 150 200 250 300 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 72..112
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..39
Relationships
The following mRNA feature(s) are a part of this gene: