MELO3C028439 (gene) Melon (DHL92) v4

Overview
NameMELO3C028439
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUbiquitin-like-specific protease ESD4 isoform X2
Locationchr08: 9571724 .. 9572615 (+)
RNA-Seq ExpressionMELO3C028439
SyntenyMELO3C028439
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGTACAATGTTTTAATTCCTAAACAAAATCACAATATGTTGGATTTAAAACATGTAAAAATGTTGGATGATAAAGAGAAGTTTAGGAATTATCCTTGGGGAAGGTTGTGCTTTAGTCTTACAAAGCAATTCATTCAAAATGCGGTGAAATCCAAAAGAAAATCTAAGAACTTAGAAACAGAATCTAAAGCGTATGCCTTTCTACAAGACTTCCCGATGGTTCTAGCTTACTGGGCATACGAAATACTTCCTCAACTTGCTAGTGGGTATGTGACAAGAATAGGGAAAGGGTGTCCAAGAATATTAAATTGGGAATCCAGTGAACAACTCGATTGGCAAGATCTTGAAGATAACATCTTTCTGGAAAAAAATGTAAGTTTCATTTGTTTTCGTTTCTAGTATTTTCTAAATTTGTTGTTATTAAGTGATAGATCTATACCAGTGATAGATCCTTATCAGTGATAGATCCTTATCAGTGATAGATCCATATCGGTGATAGATCCTTATCAGTTATAGATCCATATCAGTGATAGTTTCTTTTTTGTTTAACACTGATTATATATTTTGTTTTTTAGCTATCTGTGGTCCCCATTGTTGCATCAGAATAAGAAATGAAATCTGAGTACTTCAGATATTTTTTGGAATTAGAAAATGATAGATTGGATGAAGAAGCATGTGCTATGAAGGAAAGCAATATGGCAGAAAGAATATCTTCTTTACATGAAGATATTAAAGATTTAAAAAAAAGCACAACGAAGATTTAGACTGCTTGAAGAAGGGACAAGAGGAGATTGTTCGTTTGTTACTTTCACTGACAGAAGTGGTAAATCAAAGACTTTCGCACAAATGTGAAAGTGAAAAACAATCTCAAGAGCCCTTGAAAAAGAATCC

mRNA sequence

CTTGTACAATGTTTTAATTCCTAAACAAAATCACAATATGTTGGATTTAAAACATGTAAAAATGTTGGATGATAAAGAGAAGTTTAGGAATTATCCTTGGGGAAGGTTGTGCTTTAGTCTTACAAAGCAATTCATTCAAAATGCGGTGAAATCCAAAAGAAAATCTAAGAACTTAGAAACAGAATCTAAAGCGTATGCCTTTCTACAAGACTTCCCGATGGTTCTAGCTTACTGGGCATACGAAATACTTCCTCAACTTGCTAGTGGGTATGTGACAAGAATAGGGAAAGGGTGTCCAAGAATATTAAATTGGGAATCCAGTGAACAACTCGATTGGCAAGATCTTGAAGATAACATCTTTCTGGAAAAAAATCTATCTGTGGTCCCCATTGTTGCATCAGAATAAGAAATGAAATCTGAGTACTTCAGATATTTTTTGGAATTAGAAAATGATAGATTGGATGAAGAAGCATGTGCTATGAAGGAAAGCAATATGGCAGAAAGAATATCTTCTTTACATGAAGATATTAAAGATTTAAAAAAAAGCACAACGAAGATTTAGACTGCTTGAAGAAGGGACAAGAGGAGATTGTTCGTTTGTTACTTTCACTGACAGAAGTGGTAAATCAAAGACTTTCGCACAAATGTGAAAGTGAAAAACAATCTCAAGAGCCCTTGAAAAAGAATCC

Coding sequence (CDS)

ATGTTGGATTTAAAACATGTAAAAATGTTGGATGATAAAGAGAAGTTTAGGAATTATCCTTGGGGAAGGTTGTGCTTTAGTCTTACAAAGCAATTCATTCAAAATGCGGTGAAATCCAAAAGAAAATCTAAGAACTTAGAAACAGAATCTAAAGCGTATGCCTTTCTACAAGACTTCCCGATGGTTCTAGCTTACTGGGCATACGAAATACTTCCTCAACTTGCTAGTGGGTATGTGACAAGAATAGGGAAAGGGTGTCCAAGAATATTAAATTGGGAATCCAGTGAACAACTCGATTGGCAAGATCTTGAAGATAACATCTTTCTGGAAAAAAATCTATCTGTGGTCCCCATTGTTGCATCAGAATAA

Protein sequence

MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFPMVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVASE
Homology
[Close]
BLAST of MELO3C028439 vs. NCBI nr
Match: TYK22453.1 (uncharacterized protein E5676_scaffold3009G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 251.9 bits (642), Expect = 2.8e-63
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0 

Query: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFP 60
           MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQ FP
Sbjct: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQGFP 60

Query: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120
           MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA
Sbjct: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120

Query: 121 SE 123
           SE
Sbjct: 121 SE 122

[Close]
BLAST of MELO3C028439 vs. NCBI nr
Match: KAA0031317.1 (uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa] >KAA0034561.1 uncharacterized protein E6C27_scaffold65G005770 [Cucumis melo var. makuwa] >KAA0035329.1 uncharacterized protein E6C27_scaffold228G001300 [Cucumis melo var. makuwa] >KAA0037560.1 uncharacterized protein E6C27_scaffold277G001820 [Cucumis melo var. makuwa] >KAA0038033.1 uncharacterized protein E6C27_scaffold36G002310 [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.1e-62
Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFP 60
           MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKA AFLQ FP
Sbjct: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKACAFLQGFP 60

Query: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120
           MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA
Sbjct: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120

Query: 121 SE 123
           SE
Sbjct: 121 SE 122

[Close]
BLAST of MELO3C028439 vs. NCBI nr
Match: TYK08201.1 (40S ribosomal protein S15-4 [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.1e-62
Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFP 60
           MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKA AFLQ FP
Sbjct: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKACAFLQGFP 60

Query: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120
           MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA
Sbjct: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120

Query: 121 SE 123
           SE
Sbjct: 121 SE 122

[Close]
BLAST of MELO3C028439 vs. NCBI nr
Match: KAA0059898.1 (uncharacterized protein E6C27_scaffold108G001930 [Cucumis melo var. makuwa])

HSP 1 Score: 246.5 bits (628), Expect = 1.2e-61
Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFP 60
           MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQN VKSKRKSKNLETESKA AFLQ FP
Sbjct: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNPVKSKRKSKNLETESKACAFLQGFP 60

Query: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120
           MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA
Sbjct: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120

Query: 121 SE 123
           SE
Sbjct: 121 SE 122

[Close]
BLAST of MELO3C028439 vs. NCBI nr
Match: KAE8651836.1 (hypothetical protein Csa_006724 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 1.5e-48
Identity = 96/114 (84.21%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 9   MLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFPMVLAYWAY 68
           MLDDKEKFR+YPW +LC+SLTKQFIQNAVKSKRKSKN E ESK+ AFLQ FP+VLAYW Y
Sbjct: 1   MLDDKEKFRSYPWAKLCYSLTKQFIQNAVKSKRKSKNSELESKSCAFLQGFPIVLAYWTY 60

Query: 69  EILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVASE 123
           EILPQLA+ YVTRIGKGCPRILNWESS Q+DWQDLE N+FLEKNLSVVPIVAS+
Sbjct: 61  EILPQLANEYVTRIGKGCPRILNWESSVQVDWQDLEANMFLEKNLSVVPIVASK 114

[Close]
BLAST of MELO3C028439 vs. ExPASy TrEMBL
Match: A0A5D3DFX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3009G00010 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0 

Query: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFP 60
           MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQ FP
Sbjct: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQGFP 60

Query: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120
           MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA
Sbjct: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120

Query: 121 SE 123
           SE
Sbjct: 121 SE 122

[Close]
BLAST of MELO3C028439 vs. ExPASy TrEMBL
Match: A0A5A7VIA9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00090 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFP 60
           MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKA AFLQ FP
Sbjct: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKACAFLQGFP 60

Query: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120
           MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA
Sbjct: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120

Query: 121 SE 123
           SE
Sbjct: 121 SE 122

[Close]
BLAST of MELO3C028439 vs. ExPASy TrEMBL
Match: A0A5D3C8N2 (40S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00170 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFP 60
           MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKA AFLQ FP
Sbjct: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKACAFLQGFP 60

Query: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120
           MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA
Sbjct: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120

Query: 121 SE 123
           SE
Sbjct: 121 SE 122

[Close]
BLAST of MELO3C028439 vs. ExPASy TrEMBL
Match: A0A5A7UXF1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G001930 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 5.7e-62
Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFP 60
           MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQN VKSKRKSKNLETESKA AFLQ FP
Sbjct: 1   MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNPVKSKRKSKNLETESKACAFLQGFP 60

Query: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120
           MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA
Sbjct: 61  MVLAYWAYEILPQLASGYVTRIGKGCPRILNWESSEQLDWQDLEDNIFLEKNLSVVPIVA 120

Query: 121 SE 123
           SE
Sbjct: 121 SE 122

[Close]
BLAST of MELO3C028439 vs. ExPASy TrEMBL
Match: A0A5A7VHY6 (Ubiquitin-like-specific protease ESD4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold179G00590 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.0e-46
Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0 

Query: 1  MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFP 60
          MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRK KNLETESKAYAFLQ FP
Sbjct: 1  MLDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKFKNLETESKAYAFLQGFP 60

Query: 61 MVLAYWAYEILPQLASGYVTRIGKGCPRILNWES 95
          MVLAYWAYEILPQLASGYVTRIGKGCPRILNWES
Sbjct: 61 MVLAYWAYEILPQLASGYVTRIGKGCPRILNWES 94

[Close]
BLAST of MELO3C028439 vs. TAIR 10
Match: AT2G07190.1 (Domain of unknown function (DUF1985) )

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 28/106 (26.42%), Postives = 49/106 (46.23%), Query Frame = 0 

Query: 2   LDLKHVKMLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNLETESKAYAFLQDFPM 61
           +D  ++KM+ D    RNYPWG   +      I  A+ + +K+K+          L  F  
Sbjct: 69  IDHLYIKMVMDLHNVRNYPWGLKAYDNLLNCIMKAIYALKKTKSY--------VLDGFSY 128

Query: 62  VLAYWAYEILPQLAS----GYVTRIGKGCPRILNWESSEQLDWQDL 104
            L  W  E +P++ S       T   +G PR  NW+ + ++ ++D+
Sbjct: 129 TLQIWVMEAIPEIGSLLGEKISTEFNEG-PRCSNWKGAAKISYEDI 165

The following BLAST results are available for this feature:
BLAST of MELO3C028439 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK22453.12.8e-6399.18uncharacterized protein E5676_scaffold3009G00010 [Cucumis melo var. makuwa][more]
KAA0031317.13.1e-6298.36uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa] >KAA0... [more]
TYK08201.13.1e-6298.3640S ribosomal protein S15-4 [Cucumis melo var. makuwa][more]
KAA0059898.11.2e-6197.54uncharacterized protein E6C27_scaffold108G001930 [Cucumis melo var. makuwa][more]
KAE8651836.11.5e-4884.21hypothetical protein Csa_006724 [Cucumis sativus][more]
BLAST of MELO3C028439 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028439 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DFX61.4e-6399.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VIA91.5e-6298.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C8N21.5e-6298.3640S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7UXF15.7e-6297.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VHY62.0e-4697.87Ubiquitin-like-specific protease ESD4 isoform X2 OS=Cucumis melo var. makuwa OX=... [more]
BLAST of MELO3C028439 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G07190.11.2e-0626.42Domain of unknown function (DUF1985) [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028439.1MELO3C028439.1mRNA