MELO3C028435 (gene) Melon (DHL92) v4

Overview
NameMELO3C028435
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr10: 10225941 .. 10231595 (-)
RNA-Seq ExpressionMELO3C028435
SyntenyMELO3C028435
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATTTGTATCATGCCTATTTTACTTTGGAGTTTAATGGTGAAATTACTTATGTACTGCATGTATTTTTTCTAATTTCTGATTCTCAGTATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGCACTACTAGAAAAAGACCCTTTCTTGACGGTTGGTTTTTTCTTTTCTTGACGGTTTTTGGTAAAACCGTCAAGAAAGGGGTGGTTTAATAGAAAAACCGTCAAGAATTTTGATGAAAAGGCGGAGGGGAGACAATTTTCAGAATTCTTGACGGTTTTAAACCGTCAAGCAATATGAATGTTTTTCTTGACAATTATAAACTGTCAAGGATTATCTTCTAAATTCTTGACGTTTTTAAAACGTCAAGATTTATTATAAAATCGACATTCTTGATGTTTTTCAAACGTCAAAAATATGTAATTATACTTGACGTTTTAAAAACGTCAGGAAATATCGATTAAATTCTTGACGTTTTAAAATGTCAAGAATTTTAATGAAAAGGTGGAGACCGAGAAATTTTAAAATTTCTTGACATTGTTAAAACGTCAAGTAAGAAAATTTTCCTTGACGTTTCAGAAACGTCAAGAATTACTAAATTAATTGAAAAAAAAAACAAAAAAAAACATTTTTTTAAAAAAACTAATTTCTTTTATTTTTTTTTAAAAAAACTAACTTCATTTTTTAAAAAAAACTTAAAACCCCAATTTTCCCTCGTGCGCCCCTCACTCCCATCTCTCGCAAAGACCCACAACCCTACCTTGTGCTGAACTGGCGAAAACCTCTCCGACGAAAACCCCTCTGGCAAAGAACCCCTCCATCGAAGAACCCCTCCGCCGAAGAACGCCCACCCTCCACCCTCAATTCGATCCTCTCTTTAATTCATTCTCTCCCCACATTCACTCTTCGATTTTCGTTCGTTCACGCTCATTCTCTAGAATTCGAAGGCTCTTCTTGATTCTCTTCTTTCTCTCCTTTATCCTCATCTCAATCTTTAGAATTTGGAGGCTCCAACATCTTCGTGATTTGCAAAGAAGAGATCTCTACGATGCAGAGAAGACCTAAACCTTAAACGAACGAGTTCTGAAAAGGGAGGTTGTTTCTGGGAAGCAATCGACCTTATTCAAGTTCTTGGCTCCTCTTGCTTACGCCTTATTTTTCCTAGGTAAGTTTAATTTTCTGAGGTTCTTCATTTTTTTGAGCATTTCTGATTATTTTCATCTGAGTTTTGTTCCAACGAGATTCTAAATTTGTGGGACTATTTTGTTTATTTTTTTCAGTTAGAATTGTGTTGTGGAAAAACCCTATTATGAGGAATCAGCTGTTCACGACAGTTTTGGTTGGTGCTTTTTTCCATGAGTATTACTTGGTGTATCCTCTTAACCCTTATATTTGCTTTAATTTTATCATTGCCTCTATCATATTGAATTCACATTCTTGAATCTCTTGTGATTTCCGTGTATCTTTGTTCATTTGTTGATGATATGCATCTACTGTTCTGTAAGTTTATCTTCTTATTTAAGAATTTTATGTTTGGCCCACCATTGATTGCTATGTATTGTAGAACCGAATTGGTGGGATATTTAGACTAATGTGGAGTTGGAAATTAACGTAATCTAAGTTCAAAAATTTTCAAAGGTGTTGATTGGTCTGTTAACTACAAAAGTATTGGGTGTTTTTCATTTGTTTGAATGTAATTAAGCCGATGTGGTGGCTCGAGGATACAGTGGCTACAATACGAGATGGGCGCTTAAGGTCATTGAACGAGTCTTCCCACCATCAGAAGAACGGGTGCTGCCAGAGAAGGTGCCGCCTCACCACTTGCTGTGATGGTATTCTTTGGATCCCTTTTAATAATTTCTCAAGATAACATCATATAAAATTTGTTTCACTTCTAGTCTTTTATTTTTATTCTTTATGGGAATCTTGGGCTTTGTTCTCAATCACATTTTGAACAAAATAGTATTTAATTAGTGATACAGATTTTACTTTATTATTATTCTTATTGTTGTTATTTACTTCCATTTATGTCAGTGAAGTTCTTGTCCTTAGTCATTTCTCTTATATTCTAGATTGTTAAAAATTGTGTCAAGCAATTAACCCTTCTAAGAGGATACATAGAGAAAATTGTGGAGGACGCAAAATGCTGTAACTTTTACTTTTGGGTCTTTACAATTTTGGGGTAAGTATAATATTTGATTTAATTTTTAGAGTAAAAGATGTACTTTTGTTGTAATTTTTATTTCTTATTGAATTTTATTGGAACAAAGTAAAACTTGTTGCTAGTTAAGTATGTCATTGTACCATACTCACGTAGGATACAAAAAGGATGTCTCTACATCTTATTATCTTTTAGCTTGCTTGTATTATGGATTGGTCTAAAGTTTCAAGTTTTCTGTCTTTTTTCTTTTTTTTTGGTCATTTGTTGTATGATGTCTCTATGTGAGATATTTTTTGGTCAATTTTGGGGTAAGATATTCTTTTTTTTAGGTTTATTACTTTTTTAGATTGATTGCATTTTGTATTATGGATTGTTCTTAATTTTGAGTTTTTTCTTTTTATTTTTTTGGTTTTCTATTGTGCGATGTCTTATGAGGAGAGGTTTTTAATTTAAATTTATCTTTTTGTTTGGATTTTCGCATTATTGATTGTTCACAAATTTTGAGTTTTTTTTTAATTGTGCAATGTCTTTTTATGAGACATTTTTAATTTAGATTTATTATTTTTTGTCTTGTTTCCATTTTGTATTATGGATTGTTTTTTGAAATTTCATTTTTGCATTATGGATTGTTCTTAAATTTTGATTTTTTTTTTTGTCTTTTGTTGTACGATGACTTTTTATGACCAATTTTTAGTTTAGATTTATTATTTCTTTTACTTGCTTGCATGTATTATGTATTGTTATAAAATTTTGAGTTTTATTTCCTTTTATGTGCGATGTCTTTTTATGTGACATTTTTAGTTTAGATTTACACAAGAACTAAGAAGAAGGGTAACATTCAACTTTGGTTAGAATGATGAGCTTATTTCTTATTTCAGATTAGTTCATATACTAAATTTGATCTTAGTTTATGTATTTTGGTTTTGACTTTAGTTTATGTAGGAGTTATTTCAATAACCATGATGGTTGATCTTGCTATAAAATGTTTTTTCATGTTCTTTTGATGCAGGAGGCGGCTATTTAATATTATAAATGATTTGCCAACAGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAAATCCAAGTCAAGTTTTAAATTGGTATGTGTATCGTGATCTTCATTTTTTGAGTTGGTTAACTGATTCTACTTGTAGCTAGTACTCTATTTCTAAGTGTAACTTTTGTTTTTATTTGATACCATTTGAGCTATCCTTTTTGTTTGGTGTCTTTGTTGGATAGTCTCCAATTTTTCAATTGGTTAACGGTGTCTTTTTTTTTCTTTTTATCTATTTTGCTAAAAATGGATTTACTTTTACTTCATACCTGTTCCTGGGGCTTAACTATATGATGTAAGTCAATTTCATTCCTTTACATCTAAATTTATGTATCTCGTTTATGAGTTTATATATTTTGTAGGTACTTGTATTCATCTAAACAGAGCAATAGCAATATTTCACTCGCAAAAGAACGTTAATAGAAGCAGGAAACAAACTTAGATTTTATTTGTCTTTGTCTTGAATTAAGGACTATTTTTGTGGTTAGTTTCTAACGGGCACCGTTTGGTCTATTAAAAAACAATATAAAGTATTAATGATTAGCTATGTTGATGATTCTGGTGGTCTGGAAGCAACTCTAGGCATTAAATTCATTATGGTTGTTGGAGAATAGAAACTGTGATTTTATTTGTGTAGTATGATCAGCTTACTCTTAATAGTTGTTAGTTGACTTCTTTGACTGAATAAGTTTTGAACATACTTTGTTGTTGTGATGTTATTTACTTCTTGTAGATTGGCTCTGCCGTTGGTGGTACTTATTTTAGCTCATGAATTGGAGGTAGTAGAGGATGCAAAATGCAAGTTTATTTCAAGCCAAGTTTCATTCAAGGTCATTGAGTTGGGTTGATAGAAGTAATGTTTTGTATATAACTATATCGAACAAATATGTAAAGTTTTCGAAATGTTGATACATATATGGTAAAATGTTAATATATGTTAAAGTTTTGGAATTGTTCTAGTGCATATTTATGTTTGAGTTTTAAAACTATATTTGATGTATATTTGTCATTTATATGTAGTTGAATTCTTGGACTAATGGGAGTATAATACAAGAACAATAATATAAATAAATTACAATTAAAAAAAATAGAAATTGCTTGACGGTTCTGAAATGTCATGAACAATAAATTTCTTGACGGTTCGCAAATGTCATAAACAACGAAATTCTTGACGATTCCAAAATGTCATTAAAAAACATACTCTTGACGGTTCCCAAAAGTCATGAAAAAGAATACTCTTGACGGGTACAAAATGTCATAAACAATCACTTTCTTGACGGTTATTAAATGTCATGAAAAATGCACTTTTGACAGTTTTAAAATGTCATGAATATTCGTATTGTTGACGGTTTTCGTCATTCATAGTCACATTCTTGACGGTTCTAAACTGTCATTAAAACTAATCTTGACGGTTCTAAACTGTCATGAATAATTGAATACTTGACGGTTATAAACTGTCAACATTAACAATTCTTGACGTTTTTACAACTGTCAAGAAAATTGCCTTTCTTGACACTGGATTCAACGACGGTTTTAAAACCGTCAAGAATAATCATTCTTGACAGTTTAAAACCGTCAAGAGAGTCAGTTTCTGTAGTAGTGATGGGGGGCTGGAAATCAGATAATGGTACATTCCGCCCAGGATACCTTTCGCAGTTGGTACGCATGATGGCATAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTAGAACGATGAAGAGAAATGCATCGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGGTATGGAATATAATTTAAACGTCACACAACGTTCACAATTTACATTTAGTAAACAATTTTTAAATTAGTACTCATACGTCATATTTTTTTTTCTGCCTGCAGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAATCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCAC

mRNA sequence

ATAATTTGTATCATGCCTATTTTACTTTGGAGTTTAATGGTGAAATTACTTATGTACTGCATGTATTTTTTCTAATTTCTGATTCTCAGTATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTGATGGGGGGCTGGAAATCAGATAATGGTACATTCCGCCCAGGATACCTTTCGCAGTTGGTACGCATGATGGCATAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTAGAACGATGAAGAGAAATGCATCGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAATCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCAC

Coding sequence (CDS)

ATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACC

Protein sequence

MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT
Homology
[Close]
BLAST of MELO3C028435 vs. NCBI nr
Match: KAA0062452.1 (hypothetical protein E6C27_scaffold130G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 4.2e-53
Identity = 108/114 (94.74%), Postives = 108/114 (94.74%), Query Frame = 0 

Query: 1   MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDL 60
           MY V IGRPVG LRHS TWGLTS VADMTDLIWGMETRTSRPCT RELTSRRTMYVHPDL
Sbjct: 1   MYSVAIGRPVGLLRHSWTWGLTSLVADMTDLIWGMETRTSRPCTTRELTSRRTMYVHPDL 60

Query: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 115
           LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT
Sbjct: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 114

[Close]
BLAST of MELO3C028435 vs. NCBI nr
Match: TYK27431.1 (hypothetical protein E5676_scaffold325G001260 [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 4.2e-53
Identity = 108/114 (94.74%), Postives = 108/114 (94.74%), Query Frame = 0 

Query: 1   MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDL 60
           MY V IGRPVG LRHS TWGLTS VADMTDLIWGMETRTSRPCT RELTSRRTMYVHPDL
Sbjct: 1   MYSVAIGRPVGLLRHSWTWGLTSLVADMTDLIWGMETRTSRPCTTRELTSRRTMYVHPDL 60

Query: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 115
           LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT
Sbjct: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 114

[Close]
BLAST of MELO3C028435 vs. NCBI nr
Match: KAA0054568.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-43
Identity = 95/113 (84.07%), Postives = 98/113 (86.73%), Query Frame = 0 

Query: 2   YLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL 61
           Y+ G  R  G       WGLTS VADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL
Sbjct: 134 YVFGRDRATGRF----AWGLTSLVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL 193

Query: 62  ALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 115
           ALQRVGP+QVDRR RG+VSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQM T
Sbjct: 194 ALQRVGPNQVDRRRRGKVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMIT 242

[Close]
BLAST of MELO3C028435 vs. NCBI nr
Match: KAA0056563.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-43
Identity = 97/116 (83.62%), Postives = 100/116 (86.21%), Query Frame = 0 

Query: 2   YLVGIGRPVGSLRHSRTW---GLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHP 61
           Y+ G  R  G  R + T+   G    VADMTDLIWGMETRTSRPCTARELTSRRTMYVHP
Sbjct: 107 YVFGRDRATG--RFAETFADVGSNEPVADMTDLIWGMETRTSRPCTARELTSRRTMYVHP 166

Query: 62  DLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 115
           DLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT
Sbjct: 167 DLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 220

[Close]
BLAST of MELO3C028435 vs. NCBI nr
Match: TYK08719.1 (hypothetical protein E5676_scaffold76G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 167.9 bits (424), Expect = 5.0e-38
Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0 

Query: 28  MTDLIWGMETRTSRPCTARELTSRRTMYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKR 87
           MTDLIWGMETRTS PCTARELTSRRTMYVHPDLLALQRVG DQVDRRGRGEVSETSSLKR
Sbjct: 1   MTDLIWGMETRTSSPCTARELTSRRTMYVHPDLLALQRVGSDQVDRRGRGEVSETSSLKR 60

Query: 88  YIWRSTKQTSNSGRLRSGQHATLQMTT 115
           YIW STKQTSNSGRLRSGQHATLQMTT
Sbjct: 61  YIWGSTKQTSNSGRLRSGQHATLQMTT 87

[Close]
BLAST of MELO3C028435 vs. ExPASy TrEMBL
Match: A0A5A7V2L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00330 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.0e-53
Identity = 108/114 (94.74%), Postives = 108/114 (94.74%), Query Frame = 0 

Query: 1   MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDL 60
           MY V IGRPVG LRHS TWGLTS VADMTDLIWGMETRTSRPCT RELTSRRTMYVHPDL
Sbjct: 1   MYSVAIGRPVGLLRHSWTWGLTSLVADMTDLIWGMETRTSRPCTTRELTSRRTMYVHPDL 60

Query: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 115
           LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT
Sbjct: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 114

[Close]
BLAST of MELO3C028435 vs. ExPASy TrEMBL
Match: A0A5D3DUQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001260 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.0e-53
Identity = 108/114 (94.74%), Postives = 108/114 (94.74%), Query Frame = 0 

Query: 1   MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDL 60
           MY V IGRPVG LRHS TWGLTS VADMTDLIWGMETRTSRPCT RELTSRRTMYVHPDL
Sbjct: 1   MYSVAIGRPVGLLRHSWTWGLTSLVADMTDLIWGMETRTSRPCTTRELTSRRTMYVHPDL 60

Query: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 115
           LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT
Sbjct: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 114

[Close]
BLAST of MELO3C028435 vs. ExPASy TrEMBL
Match: A0A5A7UHW5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G003600 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 95/113 (84.07%), Postives = 98/113 (86.73%), Query Frame = 0 

Query: 2   YLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL 61
           Y+ G  R  G       WGLTS VADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL
Sbjct: 134 YVFGRDRATGRF----AWGLTSLVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL 193

Query: 62  ALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 115
           ALQRVGP+QVDRR RG+VSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQM T
Sbjct: 194 ALQRVGPNQVDRRRRGKVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMIT 242

[Close]
BLAST of MELO3C028435 vs. ExPASy TrEMBL
Match: A0A5A7UL03 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00680 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 97/116 (83.62%), Postives = 100/116 (86.21%), Query Frame = 0 

Query: 2   YLVGIGRPVGSLRHSRTW---GLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHP 61
           Y+ G  R  G  R + T+   G    VADMTDLIWGMETRTSRPCTARELTSRRTMYVHP
Sbjct: 107 YVFGRDRATG--RFAETFADVGSNEPVADMTDLIWGMETRTSRPCTARELTSRRTMYVHP 166

Query: 62  DLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 115
           DLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT
Sbjct: 167 DLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTT 220

[Close]
BLAST of MELO3C028435 vs. ExPASy TrEMBL
Match: A0A5D3CED6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00220 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.4e-38
Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0 

Query: 28  MTDLIWGMETRTSRPCTARELTSRRTMYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKR 87
           MTDLIWGMETRTS PCTARELTSRRTMYVHPDLLALQRVG DQVDRRGRGEVSETSSLKR
Sbjct: 1   MTDLIWGMETRTSSPCTARELTSRRTMYVHPDLLALQRVGSDQVDRRGRGEVSETSSLKR 60

Query: 88  YIWRSTKQTSNSGRLRSGQHATLQMTT 115
           YIW STKQTSNSGRLRSGQHATLQMTT
Sbjct: 61  YIWGSTKQTSNSGRLRSGQHATLQMTT 87

The following BLAST results are available for this feature:
BLAST of MELO3C028435 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062452.14.2e-5394.74hypothetical protein E6C27_scaffold130G00330 [Cucumis melo var. makuwa][more]
TYK27431.14.2e-5394.74hypothetical protein E5676_scaffold325G001260 [Cucumis melo var. makuwa][more]
KAA0054568.13.0e-4384.07retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0056563.13.0e-4383.62retrotransposon protein [Cucumis melo var. makuwa][more]
TYK08719.15.0e-3896.55hypothetical protein E5676_scaffold76G00220 [Cucumis melo var. makuwa][more]
BLAST of MELO3C028435 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028435 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V2L22.0e-5394.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DUQ62.0e-5394.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UHW51.5e-4384.07Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UL031.5e-4383.62Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CED62.4e-3896.55Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C028435 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028435.1MELO3C028435.1mRNA