MELO3C028381 (gene) Melon (DHL92) v4

Overview
NameMELO3C028381
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr10: 12603375 .. 12603519 (-)
RNA-Seq ExpressionMELO3C028381
SyntenyMELO3C028381
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGGACGCTCGGCTGCGCAGATCGGCTTGGACGATTCTTCCGACGCGGCTGGAAGCTCGGCGACGGCTCGGTTTCGACTGCGGCTCGGCTGCGCTGCTGAACAGAGAGGGGGTGCTTGGCGGCTCGGGTTCGCGGCGGCGGCGGC

mRNA sequence

ACGGACGCTCGGCTGCGCAGATCGGCTTGGACGATTCTTCCGACGCGGCTGGAAGCTCGGCGACGGCTCGGTTTCGACTGCGGCTCGGCTGCGCTGCTGAACAGAGAGGGGGTGCTTGGCGGCTCGGGTTCGCGGCGGCGGCGGC

Coding sequence (CDS)

ACGGACGCTCGGCTGCGCAGATCGGCTTGGACGATTCTTCCGACGCGGCTGGAAGCTCGGCGACGGCTCGGTTTCGACTGCGGCTCGGCTGCGCTGCTGAACAGAGAGGGGGTGCTTGGCGGCTCGGGTTCGCGGCGGCGGCGG

Protein sequence

TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVLGGSGSRRRR
Homology
BLAST of MELO3C028381 vs. NCBI nr
Match: KAA0059946.1 (hypothetical protein E6C27_scaffold1779G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVLGGSGSRRRR 49
           TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVLGGSGSRRRR
Sbjct: 107 TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVLGGSGSRRRR 154

BLAST of MELO3C028381 vs. NCBI nr
Match: KAA0036186.1 (hypothetical protein E6C27_scaffold69G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 8.8e-13
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVLGGS 43
           TDARLRRSAWTILPTRLE RRRLGFDCGS ALLNREGVLGGS
Sbjct: 306 TDARLRRSAWTILPTRLETRRRLGFDCGSTALLNREGVLGGS 347

BLAST of MELO3C028381 vs. NCBI nr
Match: KAA0061200.1 (hypothetical protein E6C27_scaffold455G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 7.0e-10
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREG 38
           TDARLR SAWTILPTR+EARRRLGFDCGSAALLNREG
Sbjct: 150 TDARLRGSAWTILPTRMEARRRLGFDCGSAALLNREG 186

BLAST of MELO3C028381 vs. NCBI nr
Match: KAA0054936.1 (hypothetical protein E6C27_scaffold43052G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 3.5e-09
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVL-----GGSGS 45
           TDARLRRSAWTIL  RLEARRRLG DCGSAALLNREG L     GG GS
Sbjct: 229 TDARLRRSAWTILLARLEARRRLGCDCGSAALLNREGCLAARVRGGEGS 277

BLAST of MELO3C028381 vs. NCBI nr
Match: KAA0053537.1 (hypothetical protein E6C27_scaffold190G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 7.7e-09
Identity = 35/39 (89.74%), Postives = 35/39 (89.74%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVL 40
           TDARLRRSAWTIL  RLEARRRLG DCGSAALLNREG L
Sbjct: 229 TDARLRRSAWTILLARLEARRRLGCDCGSAALLNREGCL 267

BLAST of MELO3C028381 vs. ExPASy TrEMBL
Match: A0A5A7V0D6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1779G00060 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.9e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVLGGSGSRRRR 49
           TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVLGGSGSRRRR
Sbjct: 107 TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVLGGSGSRRRR 154

BLAST of MELO3C028381 vs. ExPASy TrEMBL
Match: A0A5A7T1Y4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00540 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.3e-13
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVLGGS 43
           TDARLRRSAWTILPTRLE RRRLGFDCGS ALLNREGVLGGS
Sbjct: 306 TDARLRRSAWTILPTRLETRRRLGFDCGSTALLNREGVLGGS 347

BLAST of MELO3C028381 vs. ExPASy TrEMBL
Match: A0A5A7V1J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00250 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-10
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREG 38
           TDARLR SAWTILPTR+EARRRLGFDCGSAALLNREG
Sbjct: 150 TDARLRGSAWTILPTRMEARRRLGFDCGSAALLNREG 186

BLAST of MELO3C028381 vs. ExPASy TrEMBL
Match: A0A5A7UKW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G00720 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-09
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVL-----GGSGS 45
           TDARLRRSAWTIL  RLEARRRLG DCGSAALLNREG L     GG GS
Sbjct: 229 TDARLRRSAWTILLARLEARRRLGCDCGSAALLNREGCLAARVRGGEGS 277

BLAST of MELO3C028381 vs. ExPASy TrEMBL
Match: A0A5A7UGD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00990 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.7e-09
Identity = 35/39 (89.74%), Postives = 35/39 (89.74%), Query Frame = 0

Query: 1   TDARLRRSAWTILPTRLEARRRLGFDCGSAALLNREGVL 40
           TDARLRRSAWTIL  RLEARRRLG DCGSAALLNREG L
Sbjct: 229 TDARLRRSAWTILLARLEARRRLGCDCGSAALLNREGCL 267

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0059946.11.0e-16100.00hypothetical protein E6C27_scaffold1779G00060 [Cucumis melo var. makuwa][more]
KAA0036186.18.8e-1395.24hypothetical protein E6C27_scaffold69G00540 [Cucumis melo var. makuwa][more]
KAA0061200.17.0e-1094.59hypothetical protein E6C27_scaffold455G00250 [Cucumis melo var. makuwa][more]
KAA0054936.13.5e-0979.59hypothetical protein E6C27_scaffold43052G00720 [Cucumis melo var. makuwa][more]
KAA0053537.17.7e-0989.74hypothetical protein E6C27_scaffold190G00990 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V0D64.9e-17100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7T1Y44.3e-1395.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V1J63.4e-1094.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UKW71.7e-0979.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UGD33.7e-0989.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028381.1MELO3C028381.1mRNA