MELO3C028371 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAATGCGAGAGAGAATGCCCCGCACTCAGTTTTCTCGTCCTGGGGTAAAAAGTGGTCCCCCAACGGTTTCTTCCCTTTGGTTCGTATTGGTCATAAATATTTCGATCTTCGTGGCTCGTGCTTTGAGGACTTCAATCCACACTTCTAGCATGCTCCGTGACACATTTTCCCAAGGTATTGGTCCGGAACCGAGCTCGGTGGAGGGAGAACTAAGATGCGATCCAAAATTGTCCAAAAGATGGCCAATGCTTCAACGAGTGGCGAATCCTCGTATGGTGTCAGAAACAACTGGAAATGCATCTGCCTTGAAAAAAATGGGCTGAGCTTGAGGACTTCCGGTGTTCGTTCCAAGAAAACGTGAGCGAGAATGTTCCGGACTCAGTTTTCTCGTCCTAAAGTAAAAAGCGGTCCCCCTACGGTTTCTTGCCTTTGCTTCGTATTGGTCATAAGTCTTTTGATCATTGGGGCTCGTACTCCGAGGACTTTAACCAACACTCTTGGCATGCTATCTGACACGTTTTCCCAAGGTATAGGTCGGGAAGCGAGCTCGTTGGTGGAGAACTAAGGTGCCACCCATAACGATCCAAAAGATGGCCAATGCTTCCAATGAGTGGCGAACGGTCGTCTGTGTCATAAACCACTTGAAATGAACTTGTAGTGAAGGAAACAAGCTGAGCTCGAGGGCTTCCGATGTTCATCCCAAGAAAATGCGAGCGAGAATGCCTCGGACTCAGTTTTCTCAACCTGAGGTAAAAAGCGGTCCCCGACTCTTTCTTCCTTTTGCTTCGTATTGGTCATAAGTCTTTCGATCTTTAGGGCTCGTGCTTCGAGGACTTCAACCCACACTCCTGGCATGCTTC GAAAATGCGAGAGAGAATGCCCCGCACTCAGTTTTCTCGTCCTGGGGTAAAAAGTGGTCCCCCAACGGTTTCTTCCCTTTGCTTCGTATTGGTCATAAGTCTTTCGATCTTTAGGGCTCGTGCTTCGAGGACTTCAACCCACACTCCTGGCATGCTTC ATGCGAGAGAGAATGCCCCGCACTCAGTTTTCTCGTCCTGGGGTAAAAAGTGGTCCCCCAACGGTTTCTTCCCTTTGCTTCGTATTGGTCATAAGTCTTTCGATCTTTAGGGCTCGTGCTTCGAGGACTTCAACCCACACTCCTGGCATGCTT MRERMPRTQFSRPGVKSGPPTVSSLCFVLVISLSIFRARASRTSTHTPGML Homology
BLAST of MELO3C028371 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 1.4e-13 Identity = 43/50 (86.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of MELO3C028371 vs. NCBI nr
Match: KAA0037172.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK13901.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 84.0 bits (206), Expect = 4.2e-13 Identity = 42/50 (84.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of MELO3C028371 vs. NCBI nr
Match: TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 77.4 bits (189), Expect = 3.9e-11 Identity = 39/50 (78.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of MELO3C028371 vs. NCBI nr
Match: KAA0059489.1 (ribosomal protein L5 [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 6.7e-11 Identity = 39/47 (82.98%), Postives = 39/47 (82.98%), Query Frame = 0
BLAST of MELO3C028371 vs. NCBI nr
Match: TYK23423.1 (DUF4283 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 9.7e-10 Identity = 37/50 (74.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of MELO3C028371 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.0e-14 Identity = 43/50 (86.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of MELO3C028371 vs. ExPASy TrEMBL
Match: A0A5D3CQ36 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00910 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.0e-13 Identity = 42/50 (84.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of MELO3C028371 vs. ExPASy TrEMBL
Match: A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.9e-11 Identity = 39/50 (78.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of MELO3C028371 vs. ExPASy TrEMBL
Match: A0A5A7V129 (Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G002350 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.3e-11 Identity = 39/47 (82.98%), Postives = 39/47 (82.98%), Query Frame = 0
BLAST of MELO3C028371 vs. ExPASy TrEMBL
Match: A0A5D3DIK9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00040 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.7e-10 Identity = 37/50 (74.00%), Postives = 38/50 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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