MELO3C028291 (gene) Melon (DHL92) v4

Overview
NameMELO3C028291
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr06: 12899766 .. 12900990 (-)
RNA-Seq ExpressionMELO3C028291
SyntenyMELO3C028291
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTCTCGCTTGTGTTTTCTTGGGACGAGCACCAGAAGTCCACAAGCTCAGCCCGTTTCCTTCGCTGCAAATGCATTTATGATGTTTCTGACACCGGACGAGCGTTTACCACTCATTGGAAGCATTGGAAATCTTTTGGACTGTTTTGGGTTGCACCTTAGTTCTCCCCCCCCCTTCCAATGAGCTCACTTCCTAATCTATACATTGGGAAAACGTGTCTAGGAGCATGCCAAGAGTGTGGGTTGAAGTCCACAGAGTACGAGCCCCGAAGATCGAATGACTTATGACCAATACGAAGCCAAGGCAAGAAATCATCTGGGGACCGCTTTTTACCCCACGACGAGAAAATAGAGTGCGGGGTATTCTTGCTCCCGTTTTCACGGACAAACAACGGAAGTCCTCAAGCTCAACCTGCTTCCTTCGGTGCAAGTGCATTTTCGGTGGTCATTGAAACAGGACGAGTGTTTGCCACTCGTTGGAAGCATTGGAAATCTTTTGGACCGTTTTGGGTTGCACCTTAGTTCTCCCCCCAATGAGCTTGCTTCCTAACCTATACCTTGAGAAAACGTATCAGGGAGCATACCAAAAGTGTGGGTTGAAGTCCTCGAAGTACGAGCCCCAAAGATGGAAAGACTTATGAAAAATATGAAGTAAAGGGAAGAAACCATCGGGCGACCACTTTTTATCCTATGACGAGAAAACTGAGTTCGGGGCATTCTCGCTCGTGTTTTCTTGGAACGAACACCCGAAGTCCTTGAGCTCAGCTCGTTTTCTTCGCTACAAGTGCATTTTCGATGGTCACTAAAATAGGACGAGTGTTCGCCTCTCGTTGGAAGAATTGGCCATCTTTTGGACCGTTTTCGGTTGCACCTTAGTTCTCTTCCTCCAACGAGCTCACTTCCTGACCTATACCTAGGGAAAACATATCAGGGAGAAAGCCAGGAGTGTGGATTGAAGTCATCGGAGTACGAGCCTCGAAGATCAAACAACTTATGACTAATACGAAGCAAAGGGAAGAAACCATCGAGGGATGGTTTTTTACCCGAGGACGAGAAAACTGAGTCCGCGGTATTCTTGCTCATGTTTTCATGGGACAAACATTGAAAGTCCTTGAGCTCAGCCCGTTTCCTTTGATTCAAGTGCATTTCCAGTGGTTTCTGACACCAGACGAGCGTTCGCCACTCGTTGGAAGCAGTGTCCATCTTTTTTACCGTTTTGGGTCGCA

mRNA sequence

CATTCTCGCTTGTGTTTTCTTGGGACGAGCACCAGAAGTCCACAAGCTCAGCCCGTTTCCTTCGCTGCAAGTGCATTTCCAGTGGTTTCTGACACCAGACGAGCGTTCGCCACTCGTTGGAAGCAGTGTCCATCTTTTTTACCGTTTTGGGTCGCA

Coding sequence (CDS)

CATTCTCGCTTGTGTTTTCTTGGGACGAGCACCAGAAGTCCACAAGCTCAGCCCGTTTCCTTCGCTGCAAGTGCATTTCCAGTGGTTTCTGACACCAGACGAGCGTTCGCCACTCGTTGGAAGCAGTGTCCATCTTTTTTACCGTTTTGGGTCGCA

Protein sequence

HSRLCFLGTSTRSPQAQPVSFAASAFPVVSDTRRAFATRWKQCPSFLPFWVA
Homology
[Close]
BLAST of MELO3C028291 vs. NCBI nr
Match: KAA0065855.1 (hypothetical protein E6C27_scaffold538G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-14
Identity = 44/52 (84.62%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1  HSRLCFLGTSTRSPQAQPVSFAASAFPVVSDTRRAFATRWKQCPSFLPFWVA 53
          HSR  FLGTST SP+AQPVSFAASAFPVVSDT RAFATRWK  PSF PFWVA
Sbjct: 22 HSRSRFLGTSTGSPRAQPVSFAASAFPVVSDTGRAFATRWKLRPSFGPFWVA 73

[Close]
BLAST of MELO3C028291 vs. NCBI nr
Match: TYK01208.1 (uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 9.6e-13
Identity = 41/52 (78.85%), Postives = 43/52 (82.69%), Query Frame = 0 

Query: 1  HSRLCFLGTSTRSPQAQPVSFAASAFPVVSDTRRAFATRWKQCPSFLPFWVA 53
          HSR  FLGTST SP+A PVSFAASAF VVSDT RAFA+RWK  PSF PFWVA
Sbjct: 35 HSRSHFLGTSTESPRALPVSFAASAFSVVSDTGRAFASRWKHWPSFGPFWVA 86

[Close]
BLAST of MELO3C028291 vs. NCBI nr
Match: KAA0062674.1 (uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 2.8e-12
Identity = 40/52 (76.92%), Postives = 42/52 (80.77%), Query Frame = 0 

Query: 1  HSRLCFLGTSTRSPQAQPVSFAASAFPVVSDTRRAFATRWKQCPSFLPFWVA 53
          HSR  FLGTST SP+A PVSFAASAF VVSDT RAF +RWK  PSF PFWVA
Sbjct: 35 HSRSHFLGTSTESPRALPVSFAASAFSVVSDTGRAFTSRWKHWPSFGPFWVA 86

[Close]
BLAST of MELO3C028291 vs. ExPASy TrEMBL
Match: A0A5A7VJF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00010 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-14
Identity = 44/52 (84.62%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1  HSRLCFLGTSTRSPQAQPVSFAASAFPVVSDTRRAFATRWKQCPSFLPFWVA 53
          HSR  FLGTST SP+AQPVSFAASAFPVVSDT RAFATRWK  PSF PFWVA
Sbjct: 22 HSRSRFLGTSTGSPRAQPVSFAASAFPVVSDTGRAFATRWKLRPSFGPFWVA 73

[Close]
BLAST of MELO3C028291 vs. ExPASy TrEMBL
Match: A0A5D3BQ75 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00560 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.6e-13
Identity = 41/52 (78.85%), Postives = 43/52 (82.69%), Query Frame = 0 

Query: 1  HSRLCFLGTSTRSPQAQPVSFAASAFPVVSDTRRAFATRWKQCPSFLPFWVA 53
          HSR  FLGTST SP+A PVSFAASAF VVSDT RAFA+RWK  PSF PFWVA
Sbjct: 35 HSRSHFLGTSTESPRALPVSFAASAFSVVSDTGRAFASRWKHWPSFGPFWVA 86

[Close]
BLAST of MELO3C028291 vs. ExPASy TrEMBL
Match: A0A5A7V5Z6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001940 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-12
Identity = 40/52 (76.92%), Postives = 42/52 (80.77%), Query Frame = 0 

Query: 1  HSRLCFLGTSTRSPQAQPVSFAASAFPVVSDTRRAFATRWKQCPSFLPFWVA 53
          HSR  FLGTST SP+A PVSFAASAF VVSDT RAF +RWK  PSF PFWVA
Sbjct: 35 HSRSHFLGTSTESPRALPVSFAASAFSVVSDTGRAFTSRWKHWPSFGPFWVA 86

The following BLAST results are available for this feature:
BLAST of MELO3C028291 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065855.12.3e-1484.62hypothetical protein E6C27_scaffold538G00010 [Cucumis melo var. makuwa][more]
TYK01208.19.6e-1378.85uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa][more]
KAA0062674.12.8e-1276.92uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa][more]
BLAST of MELO3C028291 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028291 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VJF71.1e-1484.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BQ754.6e-1378.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V5Z61.3e-1276.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C028291 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028291.1MELO3C028291.1mRNA