MELO3C028283 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATACTCCCTGACACGTTTTCCAAAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGATCCAAAACAGTCCAAAAAATGGCCAATGCTTCCAACG TCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATACTCCCTGACACGTTTTCCAAAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGATCCAAAACAGTCCAAAAAATGGCCAATGCTTCCAACG CTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATACTCCCTGACACGTTTTCCAAAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGATCCAAAACAGTCCAAAAAATGGCCAATGCTTCCAACG LSIFGARTPRTSTHTPGILPDTFSKGIGREASSLEGELWCDPKQSKKWPMLPT Homology
BLAST of MELO3C028283 vs. NCBI nr
Match: TYK15439.1 (uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 3.8e-17 Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of MELO3C028283 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 6.5e-17 Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of MELO3C028283 vs. NCBI nr
Match: KAA0059489.1 (ribosomal protein L5 [Cucumis melo var. makuwa]) HSP 1 Score: 89.4 bits (220), Expect = 1.0e-14 Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of MELO3C028283 vs. NCBI nr
Match: TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 88.2 bits (217), Expect = 2.3e-14 Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0
BLAST of MELO3C028283 vs. NCBI nr
Match: TYK23424.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 8.8e-14 Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of MELO3C028283 vs. ExPASy TrEMBL
Match: A0A5D3CZ27 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00010 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.9e-17 Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of MELO3C028283 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.2e-17 Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of MELO3C028283 vs. ExPASy TrEMBL
Match: A0A5A7V129 (Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G002350 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 5.0e-15 Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of MELO3C028283 vs. ExPASy TrEMBL
Match: A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.1e-14 Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0
BLAST of MELO3C028283 vs. ExPASy TrEMBL
Match: A0A5D3DIF8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00100 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.3e-14 Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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