Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAACCCCTCCACCAAGCAAGAAGCAATCGCAAGACAAGCCCACTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCAAGCAAAACCC ATCCAAGAATGTCAATTTGACATCCCGCTCTCACTCCTTGCCCGACGTAGGGGCCCGGCATTCCATCGATTTTGACCAAACCCTTCCACCAAGCAAGAAGCAATTGCAA mRNA sequence
ATGGCCAAACCCCTCCACCAAGCAAGAAGCAATCGCAAGACAAGCCCACTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCAAGCAAAACCCATCCCGCTCTCACTCCTTGCCCGACGTAGGGGCCCGGCATTCCATCGATTTTGACCAAACCCTTCCACCAAGCAAGAAGCAATTGCAA Coding sequence (CDS)
ATGGCCAAACCCCTCCACCAAGCAAGAAGCAATCGCAAGACAAGCCCACTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCAAGCAAAACCCATCCCGCTCTCACTCCTTGCCCGACGTAGGGGCCCGGCATTCCATCGATTTTGACCAAACCCTTCCACCAAGCAAGAAGCAATTGCAA Protein sequence
MAKPLHQARSNRKTSPLGVHAHTEVQALSKQNPSRSHSLPDVGARHSIDFDQTLPPSKKQLQ
Homology
BLAST of MELO3C028205 vs. NCBI nr
Match:
TYK03168.1 (hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa])
HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0
Query: 1 MAKPLHQARSNRKTSPLGVHAHTEVQALSKQNP-------SRSHSLPDVGARHSIDFDQT 60 MAKPLHQARSNRK SPLGVHAH EVQALSKQNP SRSHSLPDVGA+HSIDFDQT Sbjct: 208 MAKPLHQARSNRKKSPLGVHAHAEVQALSKQNPSKNVNLTSRSHSLPDVGAQHSIDFDQT 267 Query: 61 LPPSKKQLQ 63 LPP+KKQ Q Sbjct: 268 LPPNKKQSQ 276
BLAST of MELO3C028205 vs. ExPASy TrEMBL
Match:
A0A5D3BW21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00500 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0
Query: 1 MAKPLHQARSNRKTSPLGVHAHTEVQALSKQNP-------SRSHSLPDVGARHSIDFDQT 60 MAKPLHQARSNRK SPLGVHAH EVQALSKQNP SRSHSLPDVGA+HSIDFDQT Sbjct: 208 MAKPLHQARSNRKKSPLGVHAHAEVQALSKQNPSKNVNLTSRSHSLPDVGAQHSIDFDQT 267 Query: 61 LPPSKKQLQ 63 LPP+KKQ Q Sbjct: 268 LPPNKKQSQ 276
The following BLAST results are available for this feature:
Match Name E-value Identity Description
TYK03168.1 3.9e-21 82.61 hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5D3BW21 1.9e-21 82.61 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
A T G G C C A A A C C C C T C C A C C A A G C A A G A A G C A A T C G C A A G A C A A G C C C A C T T G G A G T G C A C G C C C A C A C C G A G G T G C A A G C A T T G T C C A A G C A A A A C C C A T C C C G C T C T C A C T C C T T G C C C G A C G T A G G G G C C C G G C A T T C C A T C G A T T T T G A C C A A A C C C T T C C A C C A A G C A A G A A G C A A T T G C A A 20 40 60 80 100 120 140 160 180 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..62
Relationships
The following mRNA feature(s) are a part of this gene: