MELO3C027980 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027980
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Thioredoxin F-type
Location	chr11: 8205369 .. 8206867 (-)
RNA-Seq Expression	MELO3C027980
Synteny	MELO3C027980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCTTGTGTGTTCTCCCATCTACTATGTTTTCTCAACAATAATATCCTGGTATATGATAGTTTCTTAAAAAACATAGCGCACCATGGATTTACTACGTTTCGTTTAGTTTTTCTTACTGTTTTATTTCTTATCCAAATTTGAAAGTTGCTGCAGAATAACAACATTTCCGGTCCAATTCCCATTAAACTTGGAACTGTCCCATTTCTTCAAACATTAGATCTCTCAAACAACTGGTTCTCTTGTCCGATACCAACATCTTTTGCTCAGCTAAACGGTCTACACTATCTATAAGTGTTAGAAAATTTTCGCCGGTCATTTTTTCTGTTTGGGTTTCTGCAATATAGAGGATGTAAAAAACACCTCAAAAATTTCACTTTTTCCAGAGATTTCATCATTTTACATGTATGACTCTAATGAAGTTTCGATTTCTAAAGTTGGATTTTTTTATATTATTTAATGCTCTTTATTCTCAATTTTTCTTAGAGGTCATGTACTTGATGCATAAGTTGCTGCTTGTCTGTTTGCTCCTTTTCTGTTATTTATAAAAGTAACTTGCTTTTTCTTACTTTGTCTTGTAATGAGTAGCAAACTGAACAAATATCTTGACGTTGTTTTTCTAAAGCTTGATTGCAACCAAGACAATAAGGTTCATCTCATGATCCCTAATTTCTTGCTGGAAATTAGAAATGTATTTGCAGAATAGTTCATATAAGAAGTAAGAACACTTAAATTGTCTTTATCTGGCAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAGAAGGTCGTTAAAGAAGTAACTGGAGCAAAGTTCGATGATTTGGTTCATGCCATTGATAATGTAAGATCCAGCTGAAAACTCTCCTCTCTTCTCTTCTTTGTAAATTTAAATAATATGATGCAAGGAAGAGTGTTCAGGGCAGTTATTTAAATAATATGATGCAAGGAATCGACCATGGGAAATGATTCTGTATATAAAAATGTTTGGGAGATAGACATTTGAATGTGTACAACGACAGTTTCGACATATTCCAAAAATTATTTTGATATATACTTTTCTTTATGAGTGGGTTTGAATGTTTTTGTAATTGGGTTTGGGTATGTTTATGGTTTTCTTCTAGTGATAGAACTGCTTACTACTATGCTTGACATGTTTGTTTGTAATAATGGAGATGATAGAAATCAGAAGTTATCAAACTAAATGGTTTATTTTTATGTTGCTTGTAGAATAATTGAAGTCATCAAATTGAAAGCTAAGCGATTGTGTAGATAGCCAGGCGATCGTTGAAGGTTGAAGACTGAGAAGGCGTTTAGAATTTCTTATTTAAGTCTTGTATTAGGATCTTGTTTCATGTACTATTGTAGAATGTATATATAAACACAATATTACGTTTTCATTTTGTGTATACAAATTTAAAAGATAAATATTATAGTTTCTAAAATAATATTAATTTTATTAATTTGTTG

mRNA sequence

ATGCCTTCTTGTGTGTTCTCCCATCTACTATGTTTTCTCAACAATAATATCCTGTTGCTGCAGAATAACAACATTTCCGGTCCAATTCCCATTAAACTTGGAACTGTCCCATTTCTTCAAACATTAGATCTCTCAAACAACTGGTTCTCTTGTCCGATACCAACATCTTTTGCTCAGCTAAACGTAACTTGCTTTTTCTTACTTTGTCTTGTAATGAGTAGCAAACTGAACAAATATCTTGACGTTGTTTTTCTAAAGCTTGATTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAGAAGGTCGTTAAAGAAGTAACTGGAGCAAAGTTCGATGATTTGGTTCATGCCATTGATAATTGATAGAACTGCTTACTACTATGCTTGACATGTTTGTTTGTAATAATGGAGATGATAGAAATCAGAAGTTATCAAACTAAATGGTTTATTTTTATGTTGCTTGTAGAATAATTGAAGTCATCAAATTGAAAGCTAAGCGATTGTGTAGATAGCCAGGCGATCGTTGAAGGTTGAAGACTGAGAAGGCGTTTAGAATTTCTTATTTAAGTCTTGTATTAGGATCTTGTTTCATGTACTATTGTAGAATGTATATATAAACACAATATTACGTTTTCATTTTGTGTATACAAATTTAAAAGATAAATATTATAGTTTCTAAAATAATATTAATTTTATTAATTTGTTG

Coding sequence (CDS)

ATGCCTTCTTGTGTGTTCTCCCATCTACTATGTTTTCTCAACAATAATATCCTGTTGCTGCAGAATAACAACATTTCCGGTCCAATTCCCATTAAACTTGGAACTGTCCCATTTCTTCAAACATTAGATCTCTCAAACAACTGGTTCTCTTGTCCGATACCAACATCTTTTGCTCAGCTAAACGTAACTTGCTTTTTCTTACTTTGTCTTGTAATGAGTAGCAAACTGAACAAATATCTTGACGTTGTTTTTCTAAAGCTTGATTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAGAAGGTCGTTAAAGAAGTAACTGGAGCAAAGTTCGATGATTTGGTTCATGCCATTGATAATTGA

Protein sequence

MPSCVFSHLLCFLNNNILLLQNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQLNVTCFFLLCLVMSSKLNKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDN

Homology

[Close]

BLAST of MELO3C027980 vs. NCBI nr
Match: TYK18821.1 (thioredoxin F-type [Cucumis melo var. makuwa])

HSP 1 Score: 214.2 bits (544), Expect = 7.1e-52
Identity = 113/133 (84.96%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MPSCVFSHLLCFLNNNILLLQNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQL 60
           MPSCVFSHLLCFLNNNIL   NNNISGPIPI+LGTVP LQTLDLSNN FSCPIPTSFAQL
Sbjct: 1   MPSCVFSHLLCFLNNNIL---NNNISGPIPIELGTVPLLQTLDLSNNRFSCPIPTSFAQL 60

Query: 61  NVTCFFLLCLVMSSKLNKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEV 120
           N   +          LNKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEV
Sbjct: 61  NGLHYL---------LNKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEV 120

Query: 121 TGAKFDDLVHAID 134
           TGAKFDDLVHAID
Sbjct: 121 TGAKFDDLVHAID 121

[Close]

BLAST of MELO3C027980 vs. NCBI nr
Match: TYK31651.1 (thioredoxin F-type [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 2.4e-47
Identity = 108/133 (81.20%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MPSCVFSHLLCFLNNNILLLQNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQL 60
           MPSCVFSHLLCFLNNNIL   NNNISGPIPI+LGTVP LQTLDLSNN FS  IPTSFAQL
Sbjct: 1   MPSCVFSHLLCFLNNNIL---NNNISGPIPIELGTVPLLQTLDLSNNRFSGLIPTSFAQL 60

Query: 61  NVTCFFLLCLVMSSKLNKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEV 120
           N   +          LNKYLDVVFLKLDCNQDNKPLAKEL IK+VPTFKILKD KVVKEV
Sbjct: 61  NGLHYM---------LNKYLDVVFLKLDCNQDNKPLAKELRIKLVPTFKILKDMKVVKEV 120

Query: 121 TGAKFDDLVHAID 134
           TGAKFDDLVHAID
Sbjct: 121 TGAKFDDLVHAID 121

[Close]

BLAST of MELO3C027980 vs. NCBI nr
Match: KAA0051449.1 (thioredoxin F-type [Cucumis melo var. makuwa])

HSP 1 Score: 181.8 bits (460), Expect = 3.9e-42
Identity = 94/112 (83.93%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 22  NNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQLNVTCFFLLCLVMSSKLNKYLD 81
           NNNISGPIPI+L TVP LQTLDLSNN FSCPIPTSFAQLN   +F        KLNKYLD
Sbjct: 161 NNNISGPIPIELRTVPLLQTLDLSNNRFSCPIPTSFAQLNGLHYF--------KLNKYLD 220

Query: 82  VVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID 134
           +VFLK+DCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID
Sbjct: 221 LVFLKIDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID 264

[Close]

BLAST of MELO3C027980 vs. NCBI nr
Match: TYK30958.1 (protein mlo2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 178.7 bits (452), Expect = 3.3e-41
Identity = 92/113 (81.42%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 21  QNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQLNVTCFFLLCLVMSSKLNKYL 80
           +NNNI GPIPI+LGT+P LQTLDLSNN FSCPIPTSFAQLN   +          LNKYL
Sbjct: 75  KNNNIFGPIPIELGTIPLLQTLDLSNNRFSCPIPTSFAQLNGLHYL---------LNKYL 134

Query: 81  DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID 134
           DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVH ID
Sbjct: 135 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHVID 178

[Close]

BLAST of MELO3C027980 vs. NCBI nr
Match: KAA0035578.1 (protein mlo2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 177.9 bits (450), Expect = 5.6e-41
Identity = 91/113 (80.53%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 21  QNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQLNVTCFFLLCLVMSSKLNKYL 80
           +NNNI GPIPI+LGT+P LQTLDLSNN FSCPIPTSFAQLN   +          LNKYL
Sbjct: 75  KNNNIFGPIPIELGTIPLLQTLDLSNNRFSCPIPTSFAQLNGLHYL---------LNKYL 134

Query: 81  DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID 134
           DVVFLKLDCNQDNKPLAKE+GIKVVPTFKILKDKKVVKEVTGAKFDDLVH ID
Sbjct: 135 DVVFLKLDCNQDNKPLAKEIGIKVVPTFKILKDKKVVKEVTGAKFDDLVHVID 178

[Close]

BLAST of MELO3C027980 vs. ExPASy Swiss-Prot
Match: P29450 (Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-21
Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 78  KYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID 134
           KYLDVVFLKLDCNQDNK LAKELGIKVVPTFKILKD K+VKEVTGAKFDDLV AID
Sbjct: 122 KYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAID 177

[Close]

BLAST of MELO3C027980 vs. ExPASy Swiss-Prot
Match: Q9XFH9 (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-19
Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 69  CLVMSSKL----NKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAK 128
           C V++ K      KY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKD KVVKEVTGAK
Sbjct: 112 CKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAK 171

Query: 129 FDDLVHAID 134
           ++DL+ AI+
Sbjct: 172 YEDLLAAIE 180

[Close]

BLAST of MELO3C027980 vs. ExPASy Swiss-Prot
Match: Q9XFH8 (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 69  CLVMSSKL----NKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAK 128
           C V++ K      KY DVVFLKLDCN DN+PLAKELGI+VVPTFKILKD KVVKEVTGAK
Sbjct: 102 CKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAK 161

Query: 129 FDDLVHAID 134
           +DDLV AI+
Sbjct: 162 YDDLVAAIE 170

[Close]

BLAST of MELO3C027980 vs. ExPASy Swiss-Prot
Match: O48897 (Thioredoxin F-type, chloroplastic OS=Brassica napus OX=3708 GN=TRXF PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18
Identity = 49/69 (71.01%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 69  CLVMSSKL----NKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAK 128
           C V++ K      KY DVVFLKLDCN +N+PLAKELGI+VVPTFKILKD +VVKEVTGAK
Sbjct: 105 CKVIAPKYKALSEKYEDVVFLKLDCNPENRPLAKELGIRVVPTFKILKDNQVVKEVTGAK 164

Query: 129 FDDLVHAID 134
           +DDLV AI+
Sbjct: 165 YDDLVAAIE 173

[Close]

BLAST of MELO3C027980 vs. ExPASy Swiss-Prot
Match: Q8S091 (Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0913000 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18
Identity = 51/69 (73.91%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 69  CLVMSSKL----NKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAK 128
           C VM+ K      K  DVVFLKLDCNQDNK LAKELGIKVVPTFKILKD KVVKEVTGAK
Sbjct: 114 CKVMAPKFQEMSEKDQDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVTGAK 173

Query: 129 FDDLVHAID 134
            D+L+ AI+
Sbjct: 174 LDELIQAIE 182

[Close]

BLAST of MELO3C027980 vs. ExPASy TrEMBL
Match: A0A5D3D5I8 (Thioredoxin F-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00110 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.4e-52
Identity = 113/133 (84.96%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MPSCVFSHLLCFLNNNILLLQNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQL 60
           MPSCVFSHLLCFLNNNIL   NNNISGPIPI+LGTVP LQTLDLSNN FSCPIPTSFAQL
Sbjct: 1   MPSCVFSHLLCFLNNNIL---NNNISGPIPIELGTVPLLQTLDLSNNRFSCPIPTSFAQL 60

Query: 61  NVTCFFLLCLVMSSKLNKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEV 120
           N   +          LNKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEV
Sbjct: 61  NGLHYL---------LNKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEV 120

Query: 121 TGAKFDDLVHAID 134
           TGAKFDDLVHAID
Sbjct: 121 TGAKFDDLVHAID 121

[Close]

BLAST of MELO3C027980 vs. ExPASy TrEMBL
Match: A0A5D3E7R7 (Thioredoxin F-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00010 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 108/133 (81.20%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MPSCVFSHLLCFLNNNILLLQNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQL 60
           MPSCVFSHLLCFLNNNIL   NNNISGPIPI+LGTVP LQTLDLSNN FS  IPTSFAQL
Sbjct: 1   MPSCVFSHLLCFLNNNIL---NNNISGPIPIELGTVPLLQTLDLSNNRFSGLIPTSFAQL 60

Query: 61  NVTCFFLLCLVMSSKLNKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEV 120
           N   +          LNKYLDVVFLKLDCNQDNKPLAKEL IK+VPTFKILKD KVVKEV
Sbjct: 61  NGLHYM---------LNKYLDVVFLKLDCNQDNKPLAKELRIKLVPTFKILKDMKVVKEV 120

Query: 121 TGAKFDDLVHAID 134
           TGAKFDDLVHAID
Sbjct: 121 TGAKFDDLVHAID 121

[Close]

BLAST of MELO3C027980 vs. ExPASy TrEMBL
Match: A0A5A7UDC9 (Thioredoxin F-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G002070 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.9e-42
Identity = 94/112 (83.93%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 22  NNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQLNVTCFFLLCLVMSSKLNKYLD 81
           NNNISGPIPI+L TVP LQTLDLSNN FSCPIPTSFAQLN   +F        KLNKYLD
Sbjct: 161 NNNISGPIPIELRTVPLLQTLDLSNNRFSCPIPTSFAQLNGLHYF--------KLNKYLD 220

Query: 82  VVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID 134
           +VFLK+DCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID
Sbjct: 221 LVFLKIDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID 264

[Close]

BLAST of MELO3C027980 vs. ExPASy TrEMBL
Match: A0A5D3E591 (Protein mlo2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001840 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 92/113 (81.42%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 21  QNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQLNVTCFFLLCLVMSSKLNKYL 80
           +NNNI GPIPI+LGT+P LQTLDLSNN FSCPIPTSFAQLN   +          LNKYL
Sbjct: 75  KNNNIFGPIPIELGTIPLLQTLDLSNNRFSCPIPTSFAQLNGLHYL---------LNKYL 134

Query: 81  DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID 134
           DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVH ID
Sbjct: 135 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHVID 178

[Close]

BLAST of MELO3C027980 vs. ExPASy TrEMBL
Match: A0A5A7SYA0 (Protein mlo2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G002500 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.7e-41
Identity = 91/113 (80.53%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 21  QNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQLNVTCFFLLCLVMSSKLNKYL 80
           +NNNI GPIPI+LGT+P LQTLDLSNN FSCPIPTSFAQLN   +          LNKYL
Sbjct: 75  KNNNIFGPIPIELGTIPLLQTLDLSNNRFSCPIPTSFAQLNGLHYL---------LNKYL 134

Query: 81  DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAID 134
           DVVFLKLDCNQDNKPLAKE+GIKVVPTFKILKDKKVVKEVTGAKFDDLVH ID
Sbjct: 135 DVVFLKLDCNQDNKPLAKEIGIKVVPTFKILKDKKVVKEVTGAKFDDLVHVID 178

[Close]

BLAST of MELO3C027980 vs. TAIR 10
Match: AT5G16400.1 (thioredoxin F2 )

HSP 1 Score: 97.4 bits (241), Expect = 9.0e-21
Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 69  CLVMSSKL----NKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAK 128
           C V++ K      KY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKD KVVKEVTGAK
Sbjct: 112 CKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAK 171

Query: 129 FDDLVHAID 134
           ++DL+ AI+
Sbjct: 172 YEDLLAAIE 180

[Close]

BLAST of MELO3C027980 vs. TAIR 10
Match: AT3G02730.1 (thioredoxin F-type 1 )

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-20
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 69  CLVMSSKL----NKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAK 128
           C V++ K      KY DVVFLKLDCN DN+PLAKELGI+VVPTFKILKD KVVKEVTGAK
Sbjct: 102 CKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAK 161

Query: 129 FDDLVHAID 134
           +DDLV AI+
Sbjct: 162 YDDLVAAIE 170

[Close]

BLAST of MELO3C027980 vs. TAIR 10
Match: AT4G30520.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-08
Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 20  LQNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQLN 62
           LQNNNISG IP +LG +P LQTLDLSNN FS  IP S  QL+
Sbjct: 108 LQNNNISGKIPPELGFLPKLQTLDLSNNRFSGDIPVSIDQLS 149

[Close]

BLAST of MELO3C027980 vs. TAIR 10
Match: AT2G23950.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.7e-07
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 20  LQNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQLN 62
           LQNNNISG IP ++ ++P LQTLDLSNN FS  IP S  QL+
Sbjct: 105 LQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLS 146

[Close]

BLAST of MELO3C027980 vs. TAIR 10
Match: AT5G45780.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.7e-06
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 18  LLLQNNNISGPIPIKLGTVPFLQTLDLSNNWFSCPIPTSFAQL 61
           LLLQNN ++GPIP +LG +  L+TLDLS N FS  IP S   L
Sbjct: 108 LLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFL 150

The following BLAST results are available for this feature:

BLAST of MELO3C027980 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK18821.1	7.1e-52	84.96	thioredoxin F-type [Cucumis melo var. makuwa]	[more]
TYK31651.1	2.4e-47	81.20	thioredoxin F-type [Cucumis melo var. makuwa]	[more]
KAA0051449.1	3.9e-42	83.93	thioredoxin F-type [Cucumis melo var. makuwa]	[more]
TYK30958.1	3.3e-41	81.42	protein mlo2-like isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0035578.1	5.6e-41	80.53	protein mlo2-like isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C027980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29450	1.0e-21	92.86	Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9XFH9	1.3e-19	72.46	Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 ...	[more]
Q9XFH8	1.7e-19	73.91	Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 ...	[more]
O48897	1.1e-18	71.01	Thioredoxin F-type, chloroplastic OS=Brassica napus OX=3708 GN=TRXF PE=2 SV=1	[more]
Q8S091	1.1e-18	73.91	Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09...	[more]

BLAST of MELO3C027980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5I8	3.4e-52	84.96	Thioredoxin F-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G0...	[more]
A0A5D3E7R7	1.1e-47	81.20	Thioredoxin F-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G0...	[more]
A0A5A7UDC9	1.9e-42	83.93	Thioredoxin F-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00...	[more]
A0A5D3E591	1.6e-41	81.42	Protein mlo2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7SYA0	2.7e-41	80.53	Protein mlo2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of MELO3C027980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16400.1	9.0e-21	72.46	thioredoxin F2	[more]
AT3G02730.1	1.2e-20	73.91	thioredoxin F-type 1	[more]
AT4G30520.1	3.0e-08	69.05	Leucine-rich repeat protein kinase family protein	[more]
AT2G23950.1	5.7e-07	64.29	Leucine-rich repeat protein kinase family protein	[more]
AT5G45780.1	3.7e-06	58.14	Leucine-rich repeat protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 4..67 e-value: 1.1E-9 score: 40.1
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 76..133 e-value: 9.8E-8 score: 31.9
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 69..134 e-value: 1.9E-11 score: 45.6
None	No IPR available	PANTHER	PTHR10438:SF382	THIOREDOXIN F2, CHLOROPLASTIC	coord: 73..133
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 73..133
None	No IPR available	CDD	cd02947	TRX_family	coord: 69..133 e-value: 1.57917E-10 score: 52.1753
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 17..90
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 77..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027980.1	MELO3C027980.1	mRNA