Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTTCACGAACAAGCCCGCTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCGCGCAAGCCCATCCGAGCATCAACTCGACACCCGCTCTCACTCCCTGCCCGATGGACAAGCCCATCGTTATGGCCAAACCCCTCCACCAAGCAAGAAGCAATCGCAA mRNA sequence
ATCTTCACGAACAAGCCCGCTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCGCGCAAGCCCATCCGAGCATCAACTCGACACCCGCTCTCACTCCCTGCCCGATGGACAAGCCCATCGTTATGGCCAAACCCCTCCACCAAGCAAGAAGCAATCGCAA Coding sequence (CDS)
ATCTTCACGAACAAGCCCGCTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCGCGCAAGCCCATCCGAGCATCAACTCGACACCCGCTCTCACTCCCTGCCCGATGGACAAGCCCATCGTTATGGCCAAACCCCTCCACCAAGCAAGAAGCAATCGCAA Protein sequence
IFTNKPAWSARPHRGASIVRASPSEHQLDTRSHSLPDGQAHRYGQTPPPSKKQSQ
Homology
BLAST of MELO3C027964 vs. NCBI nr
Match:
TYK03168.1 (hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa])
HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 0
Query: 1 IFTNKPAWSARPHRGASIVRASPSEHQLDTRSHSLPDGQAHRYGQTPPPSKKQS 55 IFTNK P+RGASIVRASPSEHQLDTRSHSLPDGQA+RYGQ+ PPS KQS Sbjct: 340 IFTNKARLECTPNRGASIVRASPSEHQLDTRSHSLPDGQAYRYGQSLPPSTKQS 393
BLAST of MELO3C027964 vs. ExPASy TrEMBL
Match:
A0A5D3BW21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00500 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 5.8e-14
Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 0
Query: 1 IFTNKPAWSARPHRGASIVRASPSEHQLDTRSHSLPDGQAHRYGQTPPPSKKQS 55 IFTNK P+RGASIVRASPSEHQLDTRSHSLPDGQA+RYGQ+ PPS KQS Sbjct: 340 IFTNKARLECTPNRGASIVRASPSEHQLDTRSHSLPDGQAYRYGQSLPPSTKQS 393
The following BLAST results are available for this feature:
Match Name E-value Identity Description
TYK03168.1 1.2e-13 79.63 hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5D3BW21 5.8e-14 79.63 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
A T C T T C A C G A A C A A G C C C G C T T G G A G T G C A C G C C C A C A C C G A G G T G C A A G C A T T G T C C G C G C A A G C C C A T C C G A G C A T C A A C T C G A C A C C C G C T C T C A C T C C C T G C C C G A T G G A C A A G C C C A T C G T T A T G G C C A A A C C C C T C C A C C A A G C A A G A A G C A A T C G C A A 20 40 60 80 100 120 140 160 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..55
Relationships
The following mRNA feature(s) are a part of this gene: