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MELO3C027783 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCGAGGCATTCTCGCTCGCATTTTCTTTGGACGAGAAATGGAAGTCCTCGAGCTCAGCCTGTTTCCTTCGCTGCAAGTGCATTTCCAGTAGTTTCTGACGCCAGACGAGTGTTCACCACTCGTTGGAAGTATTGGCCATCTTTTGGAACGTCTTGGATCGCACCACATTTCTCCCTCCAACAAGCTCGCTATCCGACCTATACCTCCAAAAAATGTGTCAGGGAGCATGCCAGGAGTCTGGGTTGAAGTCCTCAGAGTACAAGCCCCGAAGATCCAAAAACTTAGGACGAATATGGAGAAAAGGGAAGAAACCCTCGCAGGTCCGCTTTTTGCCCCAAGACCAGAAAATTGAGTTCGGGGCATTCTCGCTCGCATTTTTTTGGGACTAGCATTGGAAGTCCTCGAGCTCATCCTGTTTCCTTCGCTGCAAGTGTATTTCCAATGGTTTCTGACACCGGACGAGCGTTCGCCACTCGTTGGAAGCATTGATCATCTTTTGAACCGTTTTGGGTCGTACCACAGTTCTCCCCTCAACGAGCTCGCTTCCCGACCTATACCTTCGGAAAATATGTTAGACAGTATGCCAGGAGTGTGGGTTAAAGTCCTCGGAGTACGAGCCTCGAGGATCGAAAGACTTATGACCAATACGGAACAGAGGGAACAAACCGTTGGTGGATCGCTTTTTGCGCTAGGACGAGAAAACTGAGTCTGGGGCATTGTCGCTCGCATTTTCTTGGGACGAGAACTAAACGTCCTCAAGCGCAACCTGTTTTCTTCACTGCAAGTGCATTTCCAGTGGTTTCTGACACCGAACGAGCGTTCACCACTCGTTGAAAGCATTGACCATCTTTTGGACTGTTTTGGATCGCACAACAGTTCTCCCTCGAACGAGCTCGCTTCCTGACCTATACCTCCGGAAAACATGTCAGGGAGCATGATGCCAGGAGTGTGGGTTGAAGTCCTCAGAGTGCGAGCCCCGAAGATCGAAAGACTTATGACCAATATGGAGCAAACGGAAGAAACCGTCGAGGGACCGCTTTTTGCCTCAGGATGAGAAAACTGAGTCAAGATCATTCTAGCTCGCGTTTTCTTGCGATGAGAACCAGAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTTCGCCACTCGGTGGAAGCATTGACCATCTTTGGACCCTTTTGGGTCGCACCACTGTTCTCCCTCCAACGAGCTCGCTTCCCAACCTATACCTCCAGAAAACATGTGAAGGAGCATGCCAGGAGTGTGGGTTGAAGTCCTCAGAGTACGAGCCCCGAAGATCGATAGACTTATGACCAATACGGTCCCTTGACGGTTTGAGGGACCAAAAAGCGGTCCCTTGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCAGAGCTCGTACTCAAAACGGTCCAAAAGATGGCCAATGCTTCCAACGAGTAGCGAACGCTCGTCCGATGTCAGAAACCACTGGAAATGCACTTTCAACGAAGGAAGTGAGCTGAGCTCAAGGACATCCGGTGCTCGTCCCATGAAAACGTGAGCGAGAATGCCCCGGACTCAGTTTCCTCGTCCTGGGGCAAAAAGCACACCCCCGACGGTTTCATCCCTTCGCTCCGTATTGGTAATACGTCTTTCGATCTTCAGGGCTCATACTCCGAGGACTTCAACCCACACTATTGGCATGCTCCCTAACATGTTTCCCAAAGGTATAGGTCGAAAAGCGAGCTCATTGGAGGGAGAACTGTGGTACAACCCAAAACGGTCCAAAAGATGAACAATGATTCCAATGAGTGCCGAACGCTCGTTCGGTATCAGAAACCACTGGAAATGCACTTGCAGCGAATAAAATGGGATGAGCTCGAGGAATTCCGGTTCTCGTCCCAAGAAAACGCGAGCAAGAATGCTCCAGACTCAGTTTTCTCATCCTGGGACAAAAAGCGATCCCCGAACGGTATCTTCCTTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCCTACTCCGAGGACTTCAACCACACTCTTGGCATGCTCCCTGACTCATTTTCTGGAGGTATAGGTCGGGAAGTGAGCTCGTTGGATGGAGAACTATGGTGCGACCCAAAACGGTTCAAAAGATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTG TTCGAGGCATTCTCGCTCGCATTTTCTTTGGACGAGAAATGGAAGTCCTCGAGCTCAGCCTGTTTCCTTCGCTGCAAGTGCATTTCCAGTAGTTTCTGACGCCAGACGAgcGTTCGCCACTCGGTGGAAGCATTGACCATCTTTGGACCCTTTTGGGTCGCACCACTGTTCTCCCTCCAACGAGCTCGCTTCCCAACCTATACCTCCAGAAAACATGTGAAGGAGCATGCCAGGAGTGTGGGTTGAAGTCCTCAGAGTACGAGCCCCGAAGATCGATAGACTTATGACCAATACGGTCCCTTGACGGTTTGAGGGACCAAAAAGCGGTCCCTTGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCAGAGCTCGTACTCAAAACGGTCCAAAACCCACACTATTGGCATGCTCCCTAACATGTTTCCCAAAGGTATAGGTCGGGAAGTGAGCTCGTTGGATGGAGAACTATGGTGCGACCCAAAACGGTTCAAAAGATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTG ATGCTCCCTAACATGTTTCCCAAAGGTATAGGTCGGGAAGTGAGCTCGTTGGATGGAGAACTATGGTGCGACCCAAAACGGTTCAAAAGATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACT MLPNMFPKGIGREVSSLDGELWCDPKRFKRWPMLPTSGERSSGVRNHWKCT Homology
BLAST of MELO3C027783 vs. NCBI nr
Match: KAA0026022.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]) HSP 1 Score: 104.0 bits (258), Expect = 3.9e-19 Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of MELO3C027783 vs. NCBI nr
Match: KAA0066117.1 (mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo var. makuwa]) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-18 Identity = 43/51 (84.31%), Postives = 45/51 (88.24%), Query Frame = 0
BLAST of MELO3C027783 vs. NCBI nr
Match: KAA0061317.1 (hypothetical protein E6C27_scaffold6213G00130 [Cucumis melo var. makuwa] >TYK14265.1 hypothetical protein E5676_scaffold1799G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18 Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of MELO3C027783 vs. NCBI nr
Match: TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 93.6 bits (231), Expect = 5.3e-16 Identity = 40/51 (78.43%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of MELO3C027783 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 6.9e-16 Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0
BLAST of MELO3C027783 vs. ExPASy TrEMBL
Match: A0A5A7SLK2 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29721G00010 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.9e-19 Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of MELO3C027783 vs. ExPASy TrEMBL
Match: A0A5A7VGB1 (Mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G001130 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.5e-19 Identity = 43/51 (84.31%), Postives = 45/51 (88.24%), Query Frame = 0
BLAST of MELO3C027783 vs. ExPASy TrEMBL
Match: A0A5A7V368 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1799G00060 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 9.5e-19 Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of MELO3C027783 vs. ExPASy TrEMBL
Match: A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.6e-16 Identity = 40/51 (78.43%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of MELO3C027783 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.4e-16 Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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