MELO3C027711.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C027711.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1
Location	chr06: 7736088 .. 7736767 (-)
RNA-Seq Expression	MELO3C027711.jh1
Synteny	MELO3C027711.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATAGGGAACTCTGTCGAGCGAGTAATGCACAGTCCTTAGAGATCGCTGGCCCATTGATGTTGCTACAAGTATGGGCATACGACAGATTCTCCATTATAGCTCCACAGAGAATGTTGCATCATTCAGATGGTCGACCTTTGAGTTTCAGGTACTATTTAATATATATGTTGTTTTTTTAATAGAATTGTTTTTTTAATAGAATTTGCACTATCTATAATTTATTAATTGTTTATTTCACAAATTAGATGAAGCGGTGTTCAAGCTGCATCTGAACAGTCAAAGAATATGTTGCTCATATATCGATGGACATTTGATCGACTAAGTCGGTCTCAGGTTAAATATTAACCAAATGTTCTATAATTTTATTTTTTGTTGACTACTAACGTTTGTTTTTTGAATAGATTAATTGGACACCATACACGCCCGACATTATGGCATCGCTTCCTGTTAGATGTCAGAGTGGTCAAGAGGTTTGGACTTACGTGGGTCCATTGATTTGTTTCCATCTAGTCGAGAAACATCAACCAGATCGCGTATTGCGACAGTTTAATATGTTGCAAACGCCACCAGCGATTAGCTACACAGATCAGAGGTTGCATCAAATAGATTTAAGGGGTAAACATGATGAAGATTGGCGTCGGATTCATGCGGAACATATCGGAGTGTGGAATTCGCGA

mRNA sequence

TATATAGGGAACTCTGTCGAGCGAGTAATGCACAGTCCTTAGAGATCGCTGGCCCATTGATGTTGCTACAAGTATGGGCATACGACAGATTCTCCATTATAGCTCCACAGAGAATGTTGCATCATTCAGATGGTCGACCTTTGAGTTTCAGATGAAGCGGTGTTCAAGCTGCATCTGAACAGTCAAAGAATATGTTGCTCATATATCGATGGACATTTGATCGACTAAGTCGGTCTCAGATTAATTGGACACCATACACGCCCGACATTATGGCATCGCTTCCTGTTAGATGTCAGAGTGGTCAAGAGGTTTGGACTTACGTGGGTCCATTGATTTGTTTCCATCTAGTCGAGAAACATCAACCAGATCGCGTATTGCGACAGTTTAATATGTTGCAAACGCCACCAGCGATTAGCTACACAGATCAGAGGTTGCATCAAATAGATTTAAGGGGTAAACATGATGAAGATTGGCGTCGGATTCATGCGGAACATATCGGAGTGTGGAATTCGCGA

Coding sequence (CDS)

ATGTTGCTCATATATCGATGGACATTTGATCGACTAAGTCGGTCTCAGATTAATTGGACACCATACACGCCCGACATTATGGCATCGCTTCCTGTTAGATGTCAGAGTGGTCAAGAGGTTTGGACTTACGTGGGTCCATTGATTTGTTTCCATCTAGTCGAGAAACATCAACCAGATCGCGTATTGCGACAGTTTAATATGTTGCAAACGCCACCAGCGATTAGCTACACAGATCAGAGGTTGCATCAAATAGATTTAAGGGGTAAACATGATGAAGATTGGCGTCGGATTCATGCGGAACATATCGGAGTGTGGAATTCGCGA

Protein sequence

MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR

Homology

[Close]

BLAST of MELO3C027711.jh1 vs. NCBI nr
Match: KAA0033660.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 238 bits (608), Expect = 6.96e-76
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR
Sbjct: 226 MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 285

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR
Sbjct: 286 VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 333

[Close]

BLAST of MELO3C027711.jh1 vs. NCBI nr
Match: KAA0043956.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 231 bits (589), Expect = 3.65e-74
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQ VWTYVGPLICFHLVEKHQPDR
Sbjct: 69  MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 128

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQ PPAISYTDQRLHQIDLRGKHD+DWR+IHAEHIGVWNSR
Sbjct: 129 VLRQFNMLQMPPAISYTDQRLHQIDLRGKHDQDWRQIHAEHIGVWNSR 176

[Close]

BLAST of MELO3C027711.jh1 vs. NCBI nr
Match: TYK01398.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 235 bits (599), Expect = 1.14e-73
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQ VWTYVGPLICFHLVEKHQPDR
Sbjct: 230 MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 289

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQTPPAISYTDQRLHQIDLRGKHD+DWRRIHAEHIGVWNSR
Sbjct: 290 VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAEHIGVWNSR 337

[Close]

BLAST of MELO3C027711.jh1 vs. NCBI nr
Match: KAA0044309.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK02544.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 235 bits (599), Expect = 4.17e-73
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQ VWTYVGPLICFHLVEKHQPDR
Sbjct: 281 MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 340

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQTPPAISYTDQRLHQIDLRGKHD+DWRRIHAEHIGVWNSR
Sbjct: 341 VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAEHIGVWNSR 388

[Close]

BLAST of MELO3C027711.jh1 vs. NCBI nr
Match: KAA0051993.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 235 bits (599), Expect = 1.16e-72
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQ VWTYVGPLICFHLVEKHQPDR
Sbjct: 324 MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 383

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQTPPAISYTDQRLHQIDLRGKHD+DWRRIHAEHIGVWNSR
Sbjct: 384 VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAEHIGVWNSR 431

[Close]

BLAST of MELO3C027711.jh1 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 7.8e-28
Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 5   YRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDRVLRQ 64
           YR  FD+    Q+ W PYTPD++A +P+ C SG+ +W  V PLICF +VE H+PDRVLRQ
Sbjct: 307 YRDQFDQQKDEQVIWQPYTPDLLAKIPLICVSGENIWRTVAPLICFDVVEWHRPDRVLRQ 366

Query: 65  FNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 109
           F + QT PA    ++ LH ID RGK + DW   H+ HIG+W +R
Sbjct: 367 FGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEAR 410

[Close]

BLAST of MELO3C027711.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SRW3 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001270 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 3.37e-76
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR
Sbjct: 226 MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 285

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR
Sbjct: 286 VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 333

[Close]

BLAST of MELO3C027711.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TPE7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003010 PE=4 SV=1)

HSP 1 Score: 231 bits (589), Expect = 1.77e-74
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQ VWTYVGPLICFHLVEKHQPDR
Sbjct: 69  MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 128

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQ PPAISYTDQRLHQIDLRGKHD+DWR+IHAEHIGVWNSR
Sbjct: 129 VLRQFNMLQMPPAISYTDQRLHQIDLRGKHDQDWRQIHAEHIGVWNSR 176

[Close]

BLAST of MELO3C027711.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BQW5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00920 PE=4 SV=1)

HSP 1 Score: 235 bits (599), Expect = 5.54e-74
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQ VWTYVGPLICFHLVEKHQPDR
Sbjct: 230 MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 289

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQTPPAISYTDQRLHQIDLRGKHD+DWRRIHAEHIGVWNSR
Sbjct: 290 VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAEHIGVWNSR 337

[Close]

BLAST of MELO3C027711.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 235 bits (599), Expect = 2.02e-73
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQ VWTYVGPLICFHLVEKHQPDR
Sbjct: 281 MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 340

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQTPPAISYTDQRLHQIDLRGKHD+DWRRIHAEHIGVWNSR
Sbjct: 341 VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAEHIGVWNSR 388

[Close]

BLAST of MELO3C027711.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U7U0 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004770 PE=4 SV=1)

HSP 1 Score: 235 bits (599), Expect = 5.59e-73
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDR 60
           MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQ VWTYVGPLICFHLVEKHQPDR
Sbjct: 324 MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 383

Query: 61  VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 108
           VLRQFNMLQTPPAISYTDQRLHQIDLRGKHD+DWRRIHAEHIGVWNSR
Sbjct: 384 VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAEHIGVWNSR 431

[Close]

BLAST of MELO3C027711.jh1 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 124.4 bits (311), Expect = 5.6e-29
Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 5   YRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDRVLRQ 64
           YR  FD+    Q+ W PYTPD++A +P+ C SG+ +W  V PLICF +VE H+PDRVLRQ
Sbjct: 307 YRDQFDQQKDEQVIWQPYTPDLLAKIPLICVSGENIWRTVAPLICFDVVEWHRPDRVLRQ 366

Query: 65  FNMLQTPPAISYTDQRLHQIDLRGKHDEDWRRIHAEHIGVWNSR 109
           F + QT PA    ++ LH ID RGK + DW   H+ HIG+W +R
Sbjct: 367 FGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEAR 410

[Close]

BLAST of MELO3C027711.jh1 vs. TAIR 10
Match: AT2G25010.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 44.3 bits (103), Expect = 7.3e-05
Identity = 31/89 (34.83%), Postives = 41/89 (46.07%), Query Frame = 0


Query: 5   YRWTFDRLSRSQINWTPY-------TPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQ 64
           YR   D L  S+I W PY        P I A L +    G+   T    L+CF  +E H 
Sbjct: 286 YRRELDDLDPSKITWCPYERFENLIPPHIKAKLIL----GRSKTT----LVCFEKIELHF 345

Query: 65  PDRVLRQFNMLQ-TPPAISYTDQRLHQID 86
           PDR LRQF   Q  P  +   D++  ++D
Sbjct: 346 PDRCLRQFGKRQPIPLKVKRRDRKNRRLD 366

The following BLAST results are available for this feature:

BLAST of MELO3C027711.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033660.1	6.96e-76	100.00	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0043956.1	3.65e-74	96.30	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
TYK01398.1	1.14e-73	98.15	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0044309.1	4.17e-73	98.15	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0051993.1	1.16e-72	98.15	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]

BLAST of MELO3C027711.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	7.8e-28	50.96	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]

BLAST of MELO3C027711.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SRW3	3.37e-76	100.00	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TPE7	1.77e-74	96.30	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3BQW5	5.54e-74	98.15	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TSW1	2.02e-73	98.15	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7U7U0	5.59e-73	98.15	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

BLAST of MELO3C027711.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	5.6e-29	50.96	hydrolases;protein serine/threonine phosphatases	[more]
AT2G25010.1	7.3e-05	34.83	Aminotransferase-like, plant mobile domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 5..106 e-value: 1.3E-13 score: 50.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027711.jh1.t1	MELO3C027711.jh1.t1	mRNA