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MELO3C027671 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCCAGGTACATGTGCCACAATTTGATCTCCATACCTTTTTTCTCTTCCAGCAAATCATTGCCCCTTCCATTAAATGGTTTACTGTAGAGCAACGTTGGCGGTATGAGAGAATGATTAGAGGTTGGCGTTGTGAGCATTACCAATGGGATGTGGATATCAATATCATTGGAGTAGTTGAGATTATGATATGTGAAGTTATTAATTTTTGGTTGTAACACAGTTGTGTCGATCAGTTGGAGGCAACTATCCCTCACTCCCATCCTTAAGCTCTTTACTTTTGGATAATGGGCAATTGCTTTTCCAACGAAGCGGCTGGTCAGTCTTCCATTGGTGGTACTGCCTTCTCCCAAAGTACTACTTCCAATGTTTCCATAGATTGTTTTTTGTTATCTCGGGGCTATCGGGGCCTCTATTCCCAGATCGAGGTTCTCTTCTCCTTTCTTTTTCACCTGCTTCATTCAATTATTTGGTTGTACCCTCTCAAGTCCTTTGTGTGTTTAGTGCCCCATCCTTTACTCTCTGTTGCTGTTTCCAATTGGGTTGTATTATCTTCTGGGGTATACATGTTAGATTTGCTGTAGATGTAGCCATGGTTGCTTCCTCCGTTGTTGCTTATTCTTAACTTCATGTAATTTATAGCCATCTAATTCGTTTCATCTTCCTACTTCTTCTCCGATTCTAATGGCAGCTTTCATTCTCTGCATCCAACTTGCGCGACCGAGATATATTCTCTAAGGTCAGTATCTCTTTGATGGACGTCAAAAGACTGCATCTTGAAAAATGATTTCATCCAAGATATATTCATATGGGCTTTTTTATTCCTCTGAAAGAATGCCATTTGTATATTACACATCCTTATACATGAGTTTCCAAGGTTGTTGTAGTATTTTCACGTTTCATGAGTGAAAAGATAGAATCAAGTTGCGTAATTACTTTCATTTCTGGAGCTCCTAAGTGATTGAAGATAGTTGATTTATATTTAAAATATGTTTAAAGTTTTAGAGTTAGTAGAGTTAGTTACTGATCAAGTTTTGGTAATGTCCCCTAAGTCAGTGTTAAGATTTTGGGTTGTTACAGAACCACTATAATATATCTTGTCTTTATCTTTTGCTTGTCTGAATTTGTTGCTACAAGTTTGCCTTGTGTTTCTGATGTTTATAGAGTTCAATTTTTACAATATACTACGAATTGGTGCTATAAGTAACAATATTTTACACCCCCCTCCGCTTCTTATTTTTTTTCTTAATTTTTCTTGGATGCGGTAATTTTACTATAATTTTGCAGAAGGATTGATTGAATGCCACTTTGCAAATTTTGTGGAGAATGGTGTCAATTTTGTTTACCTCGTTGTCTTCTCTGTCCCTGTAAATATATTCTTGTTCTACTTTTGAATTTTGAATTTTTAAGGTATTGAATAGACCGTTTGTTTTACTCTTCAGGTCGGTGGCAGGTTGATGTTCTGACTTCAAAAACAAATTTCATTAGACAATCTAATGTTCTCGAGCAGCAAGAAATACTCAACAAATGCTAGAGTATTATGAAAGAGGTGAACGCCACAATCTCTTTTGTTTAATGATTTTGCCTATCTTTATTTTTAGAAAATGAAATACAGAAAATCAGATTTTTTTTTTCTTCTATATCATAACCATTACTATATACAAGACAGAACTAGTTCTATTTACTTGTCAAACTTTAACGACAAATTATCGATGTTGTGGTTTCAAATTATCCATATCTCAATTGGTTTGACATTATTGTTTACATTTCATTTGACAAAAAAGAATATTTGATTAGTAACTATGCTTTCAAAATGTCAGATGGAAATGGAAAGAATAAAGTTGGGGCCATCCGACAAGGAAGCCTACACCCAATCGCTACATTCTAATACTTCATCGCCAAAGAAATTTTCTGTTGACATCATGAATCACCATATGTATGGCCTAGTTCTCACTGGAAACACATTTTTTGGACTGTTTTTCTCATAATAAGGTTAGCTTACTTTCTATATGACTTTTTATCTGGTCAAATTTAGTTTTCTGCCTTCATTTTGAGTAGATTTTGCCAGTGCAAACTGCTACGTGGTCATAAATGGAATAAATAATTTGTCTGTTTGATGATGAGATCTAATTGAAATTTTTTTGCACCTTGACTTCTACTTTTATTTTTTTTACTAACTCAGATTCCTGTTTATAGGATTGGAAGATCAAATATTGGAGGCTGGAGCAGATATTTTGGTTACTTCATCTTACCAGGTTTGTAATGCCAATGGATTAAGCTTTCTTTGTTTTAGTACTTTTCACTCTGTGATGGCTTTGGGGTGTCTTTCTTTTAAACGTTCTACTGTTGTTTTTTTAAAACTTAATGGTTCAAATCAAATATTTTCATGACGATGAATAGAATGAGTGAGGATCAAACTGATCACTCCTCTTGAATTGAAGTCAAAAAGTTCAAAATGAGCGTTTCTGCCAATGACTCATAGTACAGGTGAATTTGAAACAATTAGTTACAAGGAGTTTGTAAATATTTGGTATTGACAATCTGATCTAAACCTATTTCCACCTCCCCTTTACATTGTTATCATCAACATAGCTGATCATTAATCCTATATTTGTTGTTGTGATGTTATCTACTTCTTGTAGATTGGCTCTGCTGTTGGTGGTACTTATTTTAGCTCATGAATTGGAGGTAGTAGAGGATGCAGAATGCAAGTTTATTTGAAGCCAAGTTTCATTCAAGGTCATTGAGCTCGGTTGATAGAAGTAATGTTTTGAATATGACAATATCGAACAAATATGTAAAGTTTTCAAAATGTTGATACATATATGGTAAAATGTTAATATATGTTAAAGTTTTGGAATTGTTCTAGTGCATATTTATGTTTGAGTTTTCAAACTATATTTGTGTATATTTGTCGTTTATATGTAGTTGAATTCTTGGACCAATGGGAGCATAATATAGGAACTAGTAATTAA ATCCAGGTACATGTGCCACAATTTGATCTCCATACCTTTTTTCTCTTCCAGCAAATCATTGCCCCTTCCATTAAATGGTTTACTGTAGAGCAACGTTGGCGGTATGAGAGAATGATTAGAGGTTGGCGTTGTGAGCATTACCAATGGGATGTGGATATCAATATCATTGGAGTAGTTGAGATTATGATATGTGAATTGTGTCGATCAGTTGGAGGCAACTATCCCTCACTCCCATCCTTAAGCTCTTTACTTTTGGATAATGGGCAATTGCTTTTCCAACGAAGCGGCTGGTCAGTCTTCCATTGGTGGTACTGCCTTCTCCCAAAGTACTACTTCCAATGTTTCCATAGATTGTTTTTTGTTATCTCGGGGCTATCGGGGCCTCTATTCCCAGATCGAGAAGGATTGATTGAATGCCACTTTGCAAATTTTGTGGAGAATGGTGTCAATTTTGTTTACCTCGTTGTCTTCTCTGTCCCTATGGAAATGGAAAGAATAAAGTTGGGGCCATCCGACAAGGAAGCCTACACCCAATCGCTACATTCTAATACTTCATCGCCAAAGAAATTTTCTGTTGACATCATGAATCACCATATATTCCTGTTTATAGGATTGGAAGATCAAATATTGGAGGCTGGAGCAGATATTTTGGTTACTTCATCTTACCAGATTGGCTCTGCTGTTGGTGTTGAATTCTTGGACCAATGGGAGCATAATATAGGAACTAGTAATTAA ATCCAGGTACATGTGCCACAATTTGATCTCCATACCTTTTTTCTCTTCCAGCAAATCATTGCCCCTTCCATTAAATGGTTTACTGTAGAGCAACGTTGGCGGTATGAGAGAATGATTAGAGGTTGGCGTTGTGAGCATTACCAATGGGATGTGGATATCAATATCATTGGAGTAGTTGAGATTATGATATGTGAATTGTGTCGATCAGTTGGAGGCAACTATCCCTCACTCCCATCCTTAAGCTCTTTACTTTTGGATAATGGGCAATTGCTTTTCCAACGAAGCGGCTGGTCAGTCTTCCATTGGTGGTACTGCCTTCTCCCAAAGTACTACTTCCAATGTTTCCATAGATTGTTTTTTGTTATCTCGGGGCTATCGGGGCCTCTATTCCCAGATCGAGAAGGATTGATTGAATGCCACTTTGCAAATTTTGTGGAGAATGGTGTCAATTTTGTTTACCTCGTTGTCTTCTCTGTCCCTATGGAAATGGAAAGAATAAAGTTGGGGCCATCCGACAAGGAAGCCTACACCCAATCGCTACATTCTAATACTTCATCGCCAAAGAAATTTTCTGTTGACATCATGAATCACCATATATTCCTGTTTATAGGATTGGAAGATCAAATATTGGAGGCTGGAGCAGATATTTTGGTTACTTCATCTTACCAGATTGGCTCTGCTGTTGGTGTTGAATTCTTGGACCAATGGGAGCATAATATAGGAACTAGTAATTAA IQVHVPQFDLHTFFLFQQIIAPSIKWFTVEQRWRYERMIRGWRCEHYQWDVDINIIGVVEIMICELCRSVGGNYPSLPSLSSLLLDNGQLLFQRSGWSVFHWWYCLLPKYYFQCFHRLFFVISGLSGPLFPDREGLIECHFANFVENGVNFVYLVVFSVPMEMERIKLGPSDKEAYTQSLHSNTSSPKKFSVDIMNHHIFLFIGLEDQILEAGADILVTSSYQIGSAVGVEFLDQWEHNIGTSN Homology
BLAST of MELO3C027671 vs. NCBI nr
Match: KAE8650205.1 (hypothetical protein Csa_010979 [Cucumis sativus]) HSP 1 Score: 76.3 bits (186), Expect = 4.2e-10 Identity = 30/36 (83.33%), Postives = 35/36 (97.22%), Query Frame = 0
BLAST of MELO3C027671 vs. NCBI nr
Match: TYK13550.1 (protein BONZAI 1-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 2.3e-08 Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0
BLAST of MELO3C027671 vs. NCBI nr
Match: KAF5951331.1 (hypothetical protein HYC85_009275 [Camellia sinensis]) HSP 1 Score: 65.1 bits (157), Expect = 9.7e-07 Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of MELO3C027671 vs. NCBI nr
Match: RVX05079.1 (Histidine--tRNA ligase, chloroplastic/mitochondrial [Vitis vinifera]) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-05 Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0
BLAST of MELO3C027671 vs. NCBI nr
Match: XP_034913837.1 (histidine--tRNA ligase, chloroplastic/mitochondrial [Populus alba]) HSP 1 Score: 59.7 bits (143), Expect = 4.1e-05 Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of MELO3C027671 vs. ExPASy Swiss-Prot
Match: O82413 (Histidine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g46100 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.0e-06 Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of MELO3C027671 vs. ExPASy TrEMBL
Match: A0A5D3CQ33 (Protein BONZAI 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00260 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-08 Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0
BLAST of MELO3C027671 vs. ExPASy TrEMBL
Match: A0A7J7HGH2 (Histidine--tRNA ligase OS=Camellia sinensis OX=4442 GN=HYC85_009275 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.7e-07 Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of MELO3C027671 vs. ExPASy TrEMBL
Match: A0A438J7Y9 (Histidine--tRNA ligase OS=Vitis vinifera OX=29760 GN=VvCHDp000673_5 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 8.9e-06 Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0
BLAST of MELO3C027671 vs. ExPASy TrEMBL
Match: A0A4S4E024 (Histidine--tRNA ligase OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_014883 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.6e-05 Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of MELO3C027671 vs. ExPASy TrEMBL
Match: V7D0T1 (Histidine--tRNA ligase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G179200g PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 9.8e-05 Identity = 31/48 (64.58%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MELO3C027671 vs. TAIR 10
Match: AT5G03406.1 (Class II aaRS and biotin synthetases superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of MELO3C027671 vs. TAIR 10
Match: AT3G46100.1 (Histidyl-tRNA synthetase 1 ) HSP 1 Score: 53.1 bits (126), Expect = 3.6e-07 Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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