MELO3C027582 (gene) Melon (DHL92) v4

Overview
NameMELO3C027582
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionFlocculation protein FLO11-like
Locationchr04: 18810744 .. 18810902 (-)
RNA-Seq ExpressionMELO3C027582
SyntenyMELO3C027582
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGACTTTGAGTGGTGGGTGGCGGATGGAAACGACGACTAAGGTATGCGAGTGGTGGAGGACGGAGGGAGACGACGGCGGAGATTGGATTGAGAGAGACGGCGTCGAAGGCAGGGAGGCGGCACGAATG

mRNA sequence

ATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGACTTTGAGTGGTGGGTGGCGGATGGAAACGACGACTAAGGTATGCGAGTGGTGGAGGACGGAGGGAGACGACGGCGGAGATTGGATTGAGAGAGACGGCGTCGAAGGCAGGGAGGCGGCACGAATG

Coding sequence (CDS)

ATGGAAACGACGACTAAGGTATGCGAGTGGTGGAGGACGGAGGGAGACGACGGCGGAGATTGGATTGAGAGAGACGGCGTCGAAGGCAGGGAGGCGGCACGAATG

Protein sequence

METTTKVCEWWRTEGDDGGDWIERDGVEGREAARM
Homology
BLAST of MELO3C027582 vs. NCBI nr
Match: KAA0041521.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK24394.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 6.7e-10
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0

Query: 1  METTTKVCEWWRTEGDDGGDWIERDGVEGREAARM 36
          +ETTTKVCEWWR EGDDGGDWIERDGVEGREA ++
Sbjct: 16 IETTTKVCEWWRAEGDDGGDWIERDGVEGREAVQI 50

BLAST of MELO3C027582 vs. NCBI nr
Match: KAA0048296.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK10641.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 3.2e-04
Identity = 22/28 (78.57%), Postives = 23/28 (82.14%), Query Frame = 0

Query: 4  TTKVCEWWRTEGDDGGDWIERDGVEGRE 32
          T KVCEWWR  GD+GGDWIERDGV G E
Sbjct: 34 TAKVCEWWRAAGDNGGDWIERDGVGGSE 61

BLAST of MELO3C027582 vs. ExPASy TrEMBL
Match: A0A5A7TIR1 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001800 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-10
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0

Query: 1  METTTKVCEWWRTEGDDGGDWIERDGVEGREAARM 36
          +ETTTKVCEWWR EGDDGGDWIERDGVEGREA ++
Sbjct: 16 IETTTKVCEWWRAEGDDGGDWIERDGVEGREAVQI 50

BLAST of MELO3C027582 vs. ExPASy TrEMBL
Match: A0A5D3CFS1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00030 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-04
Identity = 22/28 (78.57%), Postives = 23/28 (82.14%), Query Frame = 0

Query: 4  TTKVCEWWRTEGDDGGDWIERDGVEGRE 32
          T KVCEWWR  GD+GGDWIERDGV G E
Sbjct: 34 TAKVCEWWRAAGDNGGDWIERDGVGGSE 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0041521.16.7e-1085.71flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK24394.1 flocculat... [more]
KAA0048296.13.2e-0478.57putative mitochondrial protein [Cucumis melo var. makuwa] >TYK10641.1 putative m... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TIR13.2e-1085.71Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3CFS11.6e-0478.57Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027582.1MELO3C027582.1mRNA