MELO3C027447 (gene) Melon (DHL92) v4

Overview
NameMELO3C027447
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein isoform X1
Locationchr07: 5063885 .. 5064162 (-)
RNA-Seq ExpressionMELO3C027447
SyntenyMELO3C027447
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGGACACCGTACACGCCCGACATTATGGCATCGCTTCCTCTTAGATGTCGTAGTGGTCAAGCGGTGTGGACTTACGTGGGTCCATTGATTTGTTTTCATCTGGTCGAGAAGCATCAACCAGACTGTGTGTTGTGACAGTTTAATATGTTGCAAATGCCACCTGCAATTAGTTACACAGATCCGAGCCTGCATCAAATAGATTTGAGGGGTAAGCATGATCAGGATTGGCGTCGGATTTATGCGGAACATATCGGGATGTAGAATTCGCGATA

mRNA sequence

ATGAATTGGACACCGTACACGCCCGACATTATGGCATCGCTTCCTCTTAGATGTCGTAGTGGTCAAGCGGTGTGGACTTACGTGGGTCCATTGATTTGTTTTCATCTGGTCGAGAAGCATCAACCAGACTGTGTGTTGTGACAGTTTAATATGTTGCAAATGCCACCTGCAATTAGTTACACAGATCCGAGCCTGCATCAAATAGATTTGAGGGGTAAGCATGATCAGGATTGGCGTCGGATTTATGCGGAACATATCGGGATGTAGAATTCGCGATA

Coding sequence (CDS)

ATGAATTGGACACCGTACACGCCCGACATTATGGCATCGCTTCCTCTTAGATGTCGTAGTGGTCAAGCGGTGTGGACTTACGTGGGTCCATTGATTTGTTTTCATCTGGTCGAGAAGCATCAACCAGACTGTGTGTTGTGA

Protein sequence

MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL
Homology
BLAST of MELO3C027447 vs. NCBI nr
Match: KAA0066827.1 (uncharacterized protein E6C27_scaffold271G001850 [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 6.5e-21
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL
Sbjct: 272 MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 317

BLAST of MELO3C027447 vs. NCBI nr
Match: TYK27974.1 (uncharacterized protein E5676_scaffold384G001780 [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 6.5e-21
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL
Sbjct: 272 MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 317

BLAST of MELO3C027447 vs. NCBI nr
Match: TYK03303.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK12342.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 3.0e-18
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           +NWTPYTPDIMASLP+RC+SGQAVWTYVGPLICFHLVEKHQPD VL
Sbjct: 379 INWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVL 424

BLAST of MELO3C027447 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 3.0e-18
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           +NWTPYTPDIMASLP+RC+SGQAVWTYVGPLICFHLVEKHQPD VL
Sbjct: 732 INWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVL 777

BLAST of MELO3C027447 vs. NCBI nr
Match: KAA0054305.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 3.0e-18
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           +NWTPYTPDIMASLP+RC+SGQAVWTYVGPLICFHLVEKHQPD VL
Sbjct: 275 INWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVL 320

BLAST of MELO3C027447 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.3e-11
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0

Query: 3   WTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           W PYTPD++A +PL C SG+ +W  V PLICF +VE H+PD VL
Sbjct: 321 WQPYTPDLLAKIPLICVSGENIWRTVAPLICFDVVEWHRPDRVL 364

BLAST of MELO3C027447 vs. ExPASy TrEMBL
Match: A0A5D3DWS7 (MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001780 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.1e-21
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL
Sbjct: 272 MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 317

BLAST of MELO3C027447 vs. ExPASy TrEMBL
Match: A0A5A7VI63 (MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G001850 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.1e-21
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL
Sbjct: 272 MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 317

BLAST of MELO3C027447 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-18
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           +NWTPYTPDIMASLP+RC+SGQAVWTYVGPLICFHLVEKHQPD VL
Sbjct: 297 INWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVL 342

BLAST of MELO3C027447 vs. ExPASy TrEMBL
Match: A0A5D3BUF5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001440 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-18
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           +NWTPYTPDIMASLP+RC+SGQAVWTYVGPLICFHLVEKHQPD VL
Sbjct: 379 INWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVL 424

BLAST of MELO3C027447 vs. ExPASy TrEMBL
Match: A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-18
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNWTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           +NWTPYTPDIMASLP+RC+SGQAVWTYVGPLICFHLVEKHQPD VL
Sbjct: 732 INWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVL 777

BLAST of MELO3C027447 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 67.0 bits (162), Expect = 4.5e-12
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0

Query: 3   WTPYTPDIMASLPLRCRSGQAVWTYVGPLICFHLVEKHQPDCVL 47
           W PYTPD++A +PL C SG+ +W  V PLICF +VE H+PD VL
Sbjct: 321 WQPYTPDLLAKIPLICVSGENIWRTVAPLICFDVVEWHRPDRVL 364

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0066827.16.5e-21100.00uncharacterized protein E6C27_scaffold271G001850 [Cucumis melo var. makuwa][more]
TYK27974.16.5e-21100.00uncharacterized protein E5676_scaffold384G001780 [Cucumis melo var. makuwa][more]
TYK03303.13.0e-1891.30serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0042980.13.0e-1891.30serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0054305.13.0e-1891.30serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
Match NameE-valueIdentityDescription
Q9LNG56.3e-1159.09Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana... [more]
Match NameE-valueIdentityDescription
A0A5D3DWS73.1e-21100.00MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7VI633.1e-21100.00MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5A7TSW11.5e-1891.30Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5D3BUF51.5e-1891.30Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5A7TI341.5e-1891.30Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
Match NameE-valueIdentityDescription
AT1G48120.14.5e-1259.09hydrolases;protein serine/threonine phosphatases [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027447.1MELO3C027447.1mRNA