MELO3C027433 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCACCTTTCTCTAACTGTTTGAACGATTCTAGAACAACTTCTCCACATGGTTCACTGTCTAATCCATCCCCTTTTCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCATCACATCTGGCATGCTCCCTGACATGTTTTCTAGAGGTATAGGTCAGAAAGCGAGCTCGTTGGAGGGAGAACTCTGGTGCGACCCAAAAAGGTCCAAAAGATGGCCAATGCTTCCAACGAGTGGTGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCTAAGGAAACGGGCTGAGCTACAAAACTTCCAGTGCTCGTCATAAGAAAACGCGAGCGAGAATGCCCCAGATTCAATTTTCTCGTCTTGGGGCAAAAAGCAGTCCCGCGATGGTTTTTTCCCTTTGGTCCGTATTGGTCATAAGTCTCTCGAGCATCGGGGCTCCTACTCCGAGGACATCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTTTGGAGGTATAGGTCGGGAAGCGAGCTCGTTCGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCAATTCTTCCAACGAGTGGGGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAACAAAGGAAACGGCCTGAGCTCGAGGACTTTCGGTGCTCGTCCGAAAAAACGAGAGCGAGATCGGCCCGGACTCAATTTTCTCCTCCTCGGGCAAAAGTTGGTCCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTTTTCGATCTTCGGGCCTCGTACTTCGACAACTTCAACCCACACTCCTGGCATGCTCGTTGACACGTTTTCCGGAGGTATAGGTCAGAAAGCGAGCTCTTTGGAGGGAGAACTGTGGTGCGACCTAAAACGGTCCAAAAGATGGCCAATATTTCCAACGAGTGTCGAACGCTCGCTCTGTGTCAGAAACCACTGGAAATAAACTTGCAGCGAAGAAAACAAGCTGAGCTCGAGTAGTTCGGTGCTCGTCTCGAGAAAACACGAGGGAGAATGCCCCAGACTCTGTTTTCTCGTCTCTGGGCAAAAAGCGGTACCCCGATGGTTTCTTCCCTTTGGACCGTATTGGTCATAAGTCTCTCGATCTTCAGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTCTCTGACACGTTTTCTGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGCGAGAACTGTGGTGCGACCCGAAACGGTCCAAAAGATGGCCAAATCTTCCAACGAGTGGCGAACGCTCGTTCGGTGTCAAAAACCACTAGAAATGCACTTGCAGCGAAGGAAATGGGTTGAGCTCGAGGACTTCTGGTGCTCGTGCCAAGAAAACGCGAGCGAGCATGCCTCTGACTAAGTTTTCTCGTCCTTAGTCAAAAAGCGGTCCCTCGACGATTTCTTCCCTTTGCTCCATATTGGTCATAGGTCTTTCGATCTTCGGAGCTCGTCCTCCGATGACTTCAACCCACACTCCTAGCATGCTCTCTGACACGTTTTCTCCGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAAGCGAAGGAAACGGGCTGAGCTCGAGGACTTCCGGTGCTCGTCCCAAGAAAACGCGAGCGGGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGACGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCCGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGAAATGCACTTGCAGCGAAGGAACGGGCCTGAGCTCGAGGACTTCCAGTGCTCGTCCCATTAAAACGCAAGCGAGAATGCCCCGACACAATTTTCTCGTCCCCAGGGCTAAAAGCGGTCTCTGACGGTTTGTTCCCTTTGCTCTATATTGGTCATAAGTCTTTCGATCTTTGGGGTTCGTACTCCGAGGACTTCAACCCACATTCCTAGCATGCTTCCTGACACATATTCTGGAGGTATAGGTCAGAAAGCGAGCTCGTTGGAGGGAGAACCGTGGTGCGACGCGTAACAGTCCAAAAGATGTGGAATGCTTCCAACGAGTGACGAGCGCTCGTCCGGTGTCAGAAACCACTGGAAATGAACTTGCAGCAAAGCAAATGGGCTGAGCTCGAGGATCTCCGGTGTTCGTCCCAAGAAAACGCGAGCAAGAATGTCCCAAACTCAGTTTTCTCGTCCTGGGGCAAAAAGCGGTCCCTCGACGGTTTCATCCCTTTGCCCCATATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGAACTCTGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCCGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTCCGGTGTTCGTCCCAAGAAAACGCGAGCGGGAATGAGCCGGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCTGACGGTTCCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCCGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGAGCTGAGCTTGAGGACTTCCGATGTTCGTCCCAAGCAAATGTGAGCGAGAATGCCCCAGACTCAATTTTCTCGTCCTGGGACAAAAAGCGGTCCCTCAACGGTTTCTTCCCTTTCCTCCGTATTGGTCATAAGTCTCTCGATCTTGGGGGCTTGTCCTCTGAGGACTTCAACCCACACTCCTGGCATGCTTCCTTACACGTCATACGGAGGTATAGGTCGGGAATGGAGCTTGTTGGAGGGAGAACTCTGGTGCGGTCCAAAACGATCCAAAAGATGACAAATGCTTCCAACGAGTGGTGAATGCTCGTCCGATGTTAGAAGACACTGGAAATGCACTTGCAGCAAAGGTAACGGGCTGAGCTCGAGGGCTTTTGGTGTTCGTACCAAGAAAACGGGAGCGAGAATGCCCAAGATTCAGTTTTCTCATCCTATGGTAAAAAGCGGTCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCAGAAGTCTTTCGATCTTCGGGGCTCGTGCTGCGAGGACTTTAACCCACACTACTGGCATGCTCCCTGACACGTTTTGTGGAGGTATACGTCAGGGAGCGAGCTCGTTGGAGGGAGAACTCTAGTGCGGCCCAAAACGATCCAAAAGATGGCCAATGCTTTCAACGACTGGCGAATGCTCGTCTGATTTGCGAAACTATTGGAAATGCACTTGCAGCGAAGGAAACGGGACGAGCTCGAGAACTTCCGGTGTTCGTCCCAAGAAAACGCGAGTGAGAATGCCCCAGACTAAGTTTTCCCGTCCTGGGATAAAAAGTGGTCCCTAACAGTTTCTTCCATTTGCTCGGTATTGGTCATAAGTTTTCTATCTTTGAGGCTCGTACTCCGAGGACTTCAACCCACACTCTTGGCATGCTCCTTGACACGTTTTTCGGAGGTATAGGTTGGGAACAAGCTCGTTAGAGGGAGAACTGTGGTGCGACCAAAAACGGT TTTCACCTTTCTCTAACTGTTTGAACGATTCTAGAACAACTTCTCCACATGGTTCACTGTCTAATCCATCCCCTTTTCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCATCACATCTGGCATGCTCCCTGACATGTTTTCTAGAGGTATAGGTCAGAAAGCGAGCTCGTTGGAGGGAGAACTCTGGTCAAGAAAACGGGAGCGAGAATGCCCAAGATTCAGTTTTCTCATCCTATGGTAAAAAGCGGTCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCAGAAGTCTTTCGATCTTCGGGGCTCGTGCTGCGAGGACTTTAACCCACACTACTGGCATGCTCCCTGACACGTTTTGTGGAGGTATACGTCAGGGAGCGAGCTCGTCTGATTTGCGAAACTATTGGAAATGCACTTGCAGCGAAGGAAACGGGACGAGCTCGAGAACTTCCGGTGTTCGTCCCAAGAAAACGCGAGTGAGAATGCCCCAGACTAAGTTTTCCCGTCCTGGGATAAAAAGTGGTCCCTAACAGTTTCTTCCATTTGCTCGGTATTGGTCATAAGTTTTCTATCTTTGAGGCTCGTACTCCGAGGACTTCAACCCACACTCTTGGCATGCTCCTTGACACGTTTTTCGGAGGTATAGGTTGGGAACAAGCTCGTTAGAGGGAGAACTGTGGTGCGACCAAAAACGGT ATGGTTCACTGTCTAATCCATCCCCTTTTCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCATCACATCTGGCATGCTCCCTGACATGTTTTCTAGAGGTATAGGTCAGAAAGCGAGCTCGTTGGAGGGAGAACTCTGGTCAAGAAAACGGGAGCGAGAATGCCCAAGATTCAGTTTTCTCATCCTATGGTAA MVHCLIHPLFLCSVLVISLSIFGARTPRTSTITSGMLPDMFSRGIGQKASSLEGELWSRKRERECPRFSFLILW Homology
BLAST of MELO3C027433 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 81.3 bits (199), Expect = 4.0e-12 Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of MELO3C027433 vs. NCBI nr
Match: TYK15439.1 (uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 1.8e-09 Identity = 37/54 (68.52%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of MELO3C027433 vs. NCBI nr
Match: KAA0061317.1 (hypothetical protein E6C27_scaffold6213G00130 [Cucumis melo var. makuwa] >TYK14265.1 hypothetical protein E5676_scaffold1799G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 69.7 bits (169), Expect = 1.2e-08 Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of MELO3C027433 vs. NCBI nr
Match: TYK23424.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.5 bits (158), Expect = 2.3e-07 Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0
BLAST of MELO3C027433 vs. NCBI nr
Match: TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 62.0 bits (149), Expect = 2.5e-06 Identity = 37/63 (58.73%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of MELO3C027433 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.9e-12 Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of MELO3C027433 vs. ExPASy TrEMBL
Match: A0A5D3CZ27 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00010 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.9e-10 Identity = 37/54 (68.52%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of MELO3C027433 vs. ExPASy TrEMBL
Match: A0A5A7V368 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1799G00060 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.8e-09 Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of MELO3C027433 vs. ExPASy TrEMBL
Match: A0A5D3DIF8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00100 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07 Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0
BLAST of MELO3C027433 vs. ExPASy TrEMBL
Match: A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.2e-06 Identity = 37/63 (58.73%), Postives = 38/63 (60.32%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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