MELO3C027372 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027372
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Envelope-like protein
Location	chr07: 11501589 .. 11501914 (+)
RNA-Seq Expression	MELO3C027372
Synteny	MELO3C027372

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAATGTGGTTCTATCGAAACAATTCCATCACATGAATGATTTAAAACCAGCTGAAAGTTACCCACTTTCTTCTCCACTGCCATCTGAATTGCCATCACCAGATATGGTTCCTCCCGCTGAACTTACTAGTCATATCGATTTTGATATTAATGATAAATATACCGATAATGACTCATCGATGTTGAAGGATGATGCCTATTCCCTGTTTGTACTACTGATAGATGCGACTCCTGATCCTTGTTTTGAGATCCCTCCTCCAACACTTGTTATCGCTCTTTCTGTCTCTTCTGCTGATACACTTGTGTCGACACAACCACATCAGTAA

mRNA sequence

ACAATGTGGTTCTATCGAAACAATTCCATCACATGAATGATTTAAAACCAGCTGAAAGTTACCCACTTTCTTCTCCACTGCCATCTGAATTGCCATCACCAGATATGGTTCCTCCCGCTGAACTTACTAGTCATATCGATTTTGATATTAATGATAAATATACCGATAATGACTCATCGATGTTGAAGGATGATGCCTATTCCCTGTTTGTACTACTGATAGATGCGACTCCTGATCCTTGTTTTGAGATCCCTCCTCCAACACTTGTTATCGCTCTTTCTGTCTCTTCTGCTGATACACTTGTGTCGACACAACCACATCAGTAA

Coding sequence (CDS)

ATGAATGATTTAAAACCAGCTGAAAGTTACCCACTTTCTTCTCCACTGCCATCTGAATTGCCATCACCAGATATGGTTCCTCCCGCTGAACTTACTAGTCATATCGATTTTGATATTAATGATAAATATACCGATAATGACTCATCGATGTTGAAGGATGATGCCTATTCCCTGTTTGTACTACTGATAGATGCGACTCCTGATCCTTGTTTTGAGATCCCTCCTCCAACACTTGTTATCGCTCTTTCTGTCTCTTCTGCTGATACACTTGTGTCGACACAACCACATCAGTAA

Protein sequence

MNDLKPAESYPLSSPLPSELPSPDMVPPAELTSHIDFDINDKYTDNDSSMLKDDAYSLFVLLIDATPDPCFEIPPPTLVIALSVSSADTLVSTQPHQ

Homology

[Close]

BLAST of MELO3C027372 vs. NCBI nr
Match: TYK26099.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 6.2e-05
Identity = 41/104 (39.42%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 1   MNDLKPAESYPLSSPLPSELPSPDMVPPAELTSHIDFDINDKYTDNDSSMLKDDAYS--- 60
           M++ K  E +   SP PS +P+P M PP   +SH+ +DI D    N S +  DD  S   
Sbjct: 24  MHESKLVERHSSLSPRPSTMPTPSMAPP-NTSSHVKYDIPDDNAVNSSPVSMDDVPSPVR 83

Query: 61  ----LFVLLIDATPDPCFEIPPPTLVIALSVSSADTLVSTQPHQ 98
                 V + D T D  FEIP P    A SVS  DT  ST P+Q
Sbjct: 84  ITVNTRVFVEDTTNDRRFEIPSPAAASASSVSLPDTPTSTHPYQ 126

[Close]

BLAST of MELO3C027372 vs. NCBI nr
Match: KAA0059659.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 6.2e-05
Identity = 41/104 (39.42%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 1   MNDLKPAESYPLSSPLPSELPSPDMVPPAELTSHIDFDINDKYTDNDSSMLKDDAYS--- 60
           M++ K  E +   SP PS +P+P M PP   +SH+ +DI D    N S +  DD  S   
Sbjct: 24  MHESKLVERHSSLSPRPSTMPTPSMAPP-NTSSHVKYDIPDDNAVNSSPVSMDDVPSPVR 83

Query: 61  ----LFVLLIDATPDPCFEIPPPTLVIALSVSSADTLVSTQPHQ 98
                 V + D T D  FEIP P    A SVS  DT  ST P+Q
Sbjct: 84  ITVNTRVFVEDTTNDRRFEIPSPAAASASSVSLPDTPTSTHPYQ 126

[Close]

BLAST of MELO3C027372 vs. ExPASy TrEMBL
Match: A0A5A7V1K3 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00990 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-05
Identity = 41/104 (39.42%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 1   MNDLKPAESYPLSSPLPSELPSPDMVPPAELTSHIDFDINDKYTDNDSSMLKDDAYS--- 60
           M++ K  E +   SP PS +P+P M PP   +SH+ +DI D    N S +  DD  S   
Sbjct: 24  MHESKLVERHSSLSPRPSTMPTPSMAPP-NTSSHVKYDIPDDNAVNSSPVSMDDVPSPVR 83

Query: 61  ----LFVLLIDATPDPCFEIPPPTLVIALSVSSADTLVSTQPHQ 98
                 V + D T D  FEIP P    A SVS  DT  ST P+Q
Sbjct: 84  ITVNTRVFVEDTTNDRRFEIPSPAAASASSVSLPDTPTSTHPYQ 126

[Close]

BLAST of MELO3C027372 vs. ExPASy TrEMBL
Match: A0A5D3DRS1 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00030 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-05
Identity = 41/104 (39.42%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 1   MNDLKPAESYPLSSPLPSELPSPDMVPPAELTSHIDFDINDKYTDNDSSMLKDDAYS--- 60
           M++ K  E +   SP PS +P+P M PP   +SH+ +DI D    N S +  DD  S   
Sbjct: 24  MHESKLVERHSSLSPRPSTMPTPSMAPP-NTSSHVKYDIPDDNAVNSSPVSMDDVPSPVR 83

Query: 61  ----LFVLLIDATPDPCFEIPPPTLVIALSVSSADTLVSTQPHQ 98
                 V + D T D  FEIP P    A SVS  DT  ST P+Q
Sbjct: 84  ITVNTRVFVEDTTNDRRFEIPSPAAASASSVSLPDTPTSTHPYQ 126

The following BLAST results are available for this feature:

BLAST of MELO3C027372 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK26099.1	6.2e-05	39.42	envelope-like protein [Cucumis melo var. makuwa]	[more]
KAA0059659.1	6.2e-05	39.42	envelope-like protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C027372 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V1K3	3.0e-05	39.42	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54...	[more]
A0A5D3DRS1	3.0e-05	39.42	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of MELO3C027372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027372.1	MELO3C027372.1	mRNA