MELO3C027271 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027271
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Alanine--tRNA ligase
Location	chr04: 23106285 .. 23107869 (+)
RNA-Seq Expression	MELO3C027271
Synteny	MELO3C027271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGAGAGGGGCCTGCTAGTTGATACTCAGGGTTTTAACAATGCTATGGATGAGGCGAGGGAAAGATCAAGAAGTGCTCAAAATAAGGTGAGTTCTTTTTGCTAGAGTACACTCACATTCTATTGTTGTGTTTTACAGTCTGTTGTTCTACCTTATGTGGACCTACATGACGAAACATTGTACATGCTTTCATAGACAAAACAATCCAAAAGTCTATGAATGACAGATGAATAATTTAGTTGAATTGGAGAAAACATTTCATTAGTTTCTTTTGTTTATTCCTCTTCCAGCAAGCAGGTGGTACAATTGCCATGGATGCTGATGCTACAGCAGCATTGCGCAAACAGGGAGTTGCTTCAACAGATGACAAATTCAAATTTATTTGGTTCAAGGTTTGTGAATCTATTTTTGTCAGCAAGTATGCCTATGTACCAATCAGTGGGATTGTAGTTCAATTTAGGTGGTTAATGGCCCTCAATGGATTTCTTGCAATATCATATTCAATGCCAATCCTCATCTTCTGTGCAACTTAAAAAGTTCTTTGGTGGCCTTCCATTTTTTTTTTTGTTCTAGGTGTCTCCCTCTTTTAGTTTAAATTCTAGAATGAACCTAAGTGGCATGGTATTTCTTCTCTTTTATTTTCTGTTTGCATCTCATCCTTCCTTTATAATGATCATTTTTGCTTTCATGGTTGTCTAAGGGGAGGAAAAAAACTATTACCACTGTCTGGAATCAGATGCCTGTTTCTCTTTGATTTCACTCTCAGTGGTTGTGTGTCTGTCGTTTTTTCTGAAACAGAAACAGATTTATTTATTAATAGATAAAAAAAGACATGAGTTCAAAGTATGAGAGGGTTATGCAAGAGCTATCAAAAAAACTAGGAATCAGCAGTATGCTTGGTAGCATTATTCCTTGCCATGTTTTGTTTGATGCTTTTTCCCCTCGACTTTTTGATTAGTTTTGCACCTAATTTGTGTATTTGTTTGGTTGAGGTAATTTCTTAGATAGAGATAGTAGTTTTTGGTCATTTTTGTGGAACATTTAGCACTTTGGAATCAAGATAATTTTTTCTGACAGATGTGCTCAGAGGTGGATTTTGGAATATGGACATTTTAATGCCTTCCGGACAGACATTTATGTCTATGTTGCGCCAGATATATTCCATTGAGCTCAATTACTCAATTGGGTCGCCTACTTGTAACTTTTGAAACTGGCGAACTGGGACATTGTTTTTTCGGTGTTTCTACTACTTTCTTGCCCATGTGGGTATTTTGGGGTCATTTTAGTATGCTTCTCTTGGTTGTCTTTATTTAACTTTTGTTAATGAAAGTTTAGTTTCCTATTGACATGTAATACACTTATGCTTAACACAGCCGTGTGCATTATCGGAACATGCACATTTCTGATTGTTTGACTGCTCTATGTATTGTTCAATCCTCCTATCTTTGTATTCCAGGACCATGAAAGTGTGGTGAAAGCTATTTACACCGGTTATGAATTTCTGGAAAGTGTACCCGCTGGTAATGAAGTTGGTTTAGTTCTGGAGTCTACAAGTTTTTATGCCGAGCAAGGTGGTCAG

mRNA sequence

ATGGCGGAAGAGAGGGGCCTGCTAGTTGATACTCAGGGTTTTAACAATGCTATGGATGAGGCGAGGGAAAGATCAAGAAGTGCTCAAAATAAGCAAGCAGGTGGTACAATTGCCATGGATGCTGATGCTACAGCAGCATTGCGCAAACAGGGAGTTGCTTCAACAGATGACAAATTCAAATTTATTTGGTTCAAGGACCATGAAAGTGTGGTGAAAGCTATTTACACCGGTTATGAATTTCTGGAAAGTGTACCCGCTGGTAATGAAGTTGGTTTAGTTCTGGAGTCTACAAGTTTTTATGCCGAGCAAGGTGGTCAG

Coding sequence (CDS)

ATGGCGGAAGAGAGGGGCCTGCTAGTTGATACTCAGGGTTTTAACAATGCTATGGATGAGGCGAGGGAAAGATCAAGAAGTGCTCAAAATAAGCAAGCAGGTGGTACAATTGCCATGGATGCTGATGCTACAGCAGCATTGCGCAAACAGGGAGTTGCTTCAACAGATGACAAATTCAAATTTATTTGGTTCAAGGACCATGAAAGTGTGGTGAAAGCTATTTACACCGGTTATGAATTTCTGGAAAGTGTACCCGCTGGTAATGAAGTTGGTTTAGTTCTGGAGTCTACAAGTTTTTATGCCGAGCAAGGTGGTCAG

Protein sequence

MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFKFIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ

Homology

[Close]

BLAST of MELO3C027271 vs. NCBI nr
Match: KAA0052760.1 (alanine--tRNA ligase [Cucumis melo var. makuwa])

HSP 1 Score: 207.6 bits (527), Expect = 5.3e-50
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK
Sbjct: 506 MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 565

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ
Sbjct: 566 FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 611

[Close]

BLAST of MELO3C027271 vs. NCBI nr
Match: TYK04196.1 (alanine--tRNA ligase [Cucumis melo var. makuwa])

HSP 1 Score: 207.6 bits (527), Expect = 5.3e-50
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK
Sbjct: 432 MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 491

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ
Sbjct: 492 FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 537

[Close]

BLAST of MELO3C027271 vs. NCBI nr
Match: XP_008465579.1 (PREDICTED: alanine--tRNA ligase-like [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           M EERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK
Sbjct: 1   MVEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ
Sbjct: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 106

[Close]

BLAST of MELO3C027271 vs. NCBI nr
Match: XP_004148575.2 (alanine--tRNA ligase [Cucumis sativus] >KGN58521.1 hypothetical protein Csa_001685 [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 8.4e-48
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRK+ +ASTDDKFK
Sbjct: 506 MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKKAIASTDDKFK 565

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESV AGNEVGLVLESTSFYAEQGGQ
Sbjct: 566 FIWFKDHESVVKAIYTGYEFLESVAAGNEVGLVLESTSFYAEQGGQ 611

[Close]

BLAST of MELO3C027271 vs. NCBI nr
Match: XP_038903822.1 (alanine--tRNA ligase [Benincasa hispida])

HSP 1 Score: 198.7 bits (504), Expect = 2.4e-47
Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAAL K+ VASTDDKFK
Sbjct: 510 MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALHKKAVASTDDKFK 569

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESV AGNEVGLVLESTSFYAEQGGQ
Sbjct: 570 FIWFKDHESVVKAIYTGYEFLESVDAGNEVGLVLESTSFYAEQGGQ 615

[Close]

BLAST of MELO3C027271 vs. ExPASy Swiss-Prot
Match: P36428 (Alanine--tRNA ligase OS=Arabidopsis thaliana OX=3702 GN=ALATS PE=1 SV=3)

HSP 1 Score: 159.1 bits (401), Expect = 2.8e-38
Identity = 81/106 (76.42%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVD  GFN AM+EARERSRSAQNKQAGG I MDADAT+ L K GV++TDD FK
Sbjct: 480 MAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFK 539

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           +IWF+DHES +KAIYTG  FLES  A + VGLVL STSFYAEQGGQ
Sbjct: 540 YIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQ 585

[Close]

BLAST of MELO3C027271 vs. ExPASy Swiss-Prot
Match: Q54Y20 (Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=alaS PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.2e-14
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEE+   VD +G+    +   E  R  Q K+    + + A+A A L+   +  TDD FK
Sbjct: 424 MAEEKNYKVDIKGYEGLCEAQSEIDRKRQ-KEKKVELTLGAEANAWLKNNDIKPTDDSFK 483

Query: 61  FIWFKDHE--SVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
              +K HE  SV+KAI+ G EF+++ P G  +G+VLE+++FYAEQGGQ
Sbjct: 484 ---YKQHEIQSVIKAIWNGKEFVDTAPKGTLIGVVLENSNFYAEQGGQ 527

[Close]

BLAST of MELO3C027271 vs. ExPASy Swiss-Prot
Match: Q5A8K2 (Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=ALA1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAAL-RKQGVASTDDKF 60
           MAEE GL +D +GF  A +E+RE S+ +  K     + +D  A + L +   +  T+D+F
Sbjct: 450 MAEEAGLKIDEEGFERAKEESREASKGSGTKDGKTLVKLDVHALSELDQNDAIPKTNDEF 509

Query: 61  KFIWFKDHESVVKAIYTGYEFLESVPAGN-EVGLVLESTSFYAEQGGQ 107
           K+   ++ ++ V  IY G +F++S+   + + G++L+ T FYAEQGGQ
Sbjct: 510 KY-GLENVKAKVVGIYDGSKFVDSIEDPSIQYGILLDKTPFYAEQGGQ 556

[Close]

BLAST of MELO3C027271 vs. ExPASy Swiss-Prot
Match: Q5AQL1 (Alanine--tRNA ligase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ala1 PE=3 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 4.2e-10
Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRK-QGVASTDDKF 60
           MAEERGL +D + F  A  +A+E S+  Q K   G++ +D      L K  GV  TDD  
Sbjct: 437 MAEERGLEIDDRQFEEARHKAKEASK-GQKKTTTGSVKLDVHDLGKLEKMNGVPKTDDSA 496

Query: 61  KFIWFKDHESVVKAIYTGYEF---LESVPAGNEVGLVLESTSFYAEQGGQ 107
           KF    +  + +KAIY G  F    +++    ++G++L+ T+FYAEQGGQ
Sbjct: 497 KF-EIGNVTAQIKAIYHGKTFHSSTQNLDDSEQIGIILDRTNFYAEQGGQ 544

[Close]

BLAST of MELO3C027271 vs. ExPASy Swiss-Prot
Match: Q8CFX8 (Alanine--tRNA ligase, cytoplasmic OS=Mesocricetus auratus OX=10036 GN=Aars1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 9.4e-10
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGG--TIAMDADATAALRKQGVASTDDK 60
           +AEE+GL+VD  GF    +E +     +Q K AGG   I +D  A   LR +G+ +TDD 
Sbjct: 428 IAEEKGLVVDMDGFE---EERKLAQLKSQGKGAGGEDLIMLDIYAIEELRAKGLEATDDS 487

Query: 61  FKFIWFKDHE---------SVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
            K+ +  D           + V A+     F+E V  G E G+VL+ T FYAEQGGQ
Sbjct: 488 PKYNYHSDSSGAYVFECTVATVLALRREKMFVEEVVTGQECGVVLDKTCFYAEQGGQ 541

[Close]

BLAST of MELO3C027271 vs. ExPASy TrEMBL
Match: A0A5D3C1B3 (Alanine--tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00220 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.5e-50
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK
Sbjct: 432 MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 491

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ
Sbjct: 492 FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 537

[Close]

BLAST of MELO3C027271 vs. ExPASy TrEMBL
Match: A0A5A7UC57 (Alanine--tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43055G00130 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.5e-50
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK
Sbjct: 506 MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 565

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ
Sbjct: 566 FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 611

[Close]

BLAST of MELO3C027271 vs. ExPASy TrEMBL
Match: A0A1S3CP68 (alanine--tRNA ligase-like OS=Cucumis melo OX=3656 GN=LOC103503213 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.4e-50
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           M EERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK
Sbjct: 1   MVEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ
Sbjct: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 106

[Close]

BLAST of MELO3C027271 vs. ExPASy TrEMBL
Match: A0A0A0LEP6 (Alanine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_3G656490 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.1e-48
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRK+ +ASTDDKFK
Sbjct: 506 MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKKAIASTDDKFK 565

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESV AGNEVGLVLESTSFYAEQGGQ
Sbjct: 566 FIWFKDHESVVKAIYTGYEFLESVAAGNEVGLVLESTSFYAEQGGQ 611

[Close]

BLAST of MELO3C027271 vs. ExPASy TrEMBL
Match: A0A6J1F2W2 (Alanine--tRNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111441875 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.2e-46
Identity = 100/106 (94.34%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGG I MDADATAAL K+ VASTDDKFK
Sbjct: 511 MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKKEVASTDDKFK 570

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           FIWFKDHESVVKAIYTGYEFLESV AGNEVGLVLESTSFYAEQGGQ
Sbjct: 571 FIWFKDHESVVKAIYTGYEFLESVAAGNEVGLVLESTSFYAEQGGQ 616

[Close]

BLAST of MELO3C027271 vs. TAIR 10
Match: AT1G50200.1 (Alanyl-tRNA synthetase )

HSP 1 Score: 159.1 bits (401), Expect = 2.0e-39
Identity = 81/106 (76.42%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVD  GFN AM+EARERSRSAQNKQAGG I MDADAT+ L K GV++TDD FK
Sbjct: 480 MAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFK 539

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           +IWF+DHES +KAIYTG  FLES  A + VGLVL STSFYAEQGGQ
Sbjct: 540 YIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQ 585

[Close]

BLAST of MELO3C027271 vs. TAIR 10
Match: AT1G50200.2 (Alanyl-tRNA synthetase )

HSP 1 Score: 159.1 bits (401), Expect = 2.0e-39
Identity = 81/106 (76.42%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           MAEERGLLVD  GFN AM+EARERSRSAQNKQAGG I MDADAT+ L K GV++TDD FK
Sbjct: 432 MAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFK 491

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
           +IWF+DHES +KAIYTG  FLES  A + VGLVL STSFYAEQGGQ
Sbjct: 492 YIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQ 537

[Close]

BLAST of MELO3C027271 vs. TAIR 10
Match: AT5G22800.1 (Alanyl-tRNA synthetase, class IIc )

HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06
Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 1   MAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRKQGVASTDDKFK 60
           +AEERG+ +D  GF   M+  R +S++A N     T+  DAD T  +        D +F 
Sbjct: 493 VAEERGVSIDMNGFEVEMENQRRQSQAAHN-VVKLTVEDDADMTKNI-------ADTEFL 552

Query: 61  FIWFKDHESVVKAIYTGYEFLESVPAGNEVGLVLESTSFYAEQGGQ 107
                   +VVK++    + +  V  G+EV ++L+ T FYAE GGQ
Sbjct: 553 GYDSLSARAVVKSLLVNGKPVIRVSEGSEVEVLLDRTPFYAESGGQ 590

The following BLAST results are available for this feature:

BLAST of MELO3C027271 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052760.1	5.3e-50	100.00	alanine--tRNA ligase [Cucumis melo var. makuwa]	[more]
TYK04196.1	5.3e-50	100.00	alanine--tRNA ligase [Cucumis melo var. makuwa]	[more]
XP_008465579.1	1.5e-49	99.06	PREDICTED: alanine--tRNA ligase-like [Cucumis melo]	[more]
XP_004148575.2	8.4e-48	96.23	alanine--tRNA ligase [Cucumis sativus] >KGN58521.1 hypothetical protein Csa_0016...	[more]
XP_038903822.1	2.4e-47	96.23	alanine--tRNA ligase [Benincasa hispida]	[more]

BLAST of MELO3C027271 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36428	2.8e-38	76.42	Alanine--tRNA ligase OS=Arabidopsis thaliana OX=3702 GN=ALATS PE=1 SV=3	[more]
Q54Y20	8.2e-14	41.67	Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=alaS P...	[more]
Q5A8K2	1.1e-10	36.11	Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=2375...	[more]
Q5AQL1	4.2e-10	39.09	Alanine--tRNA ligase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 1...	[more]
Q8CFX8	9.4e-10	38.46	Alanine--tRNA ligase, cytoplasmic OS=Mesocricetus auratus OX=10036 GN=Aars1 PE=2...	[more]

BLAST of MELO3C027271 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C1B3	2.5e-50	100.00	Alanine--tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold185...	[more]
A0A5A7UC57	2.5e-50	100.00	Alanine--tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430...	[more]
A0A1S3CP68	7.4e-50	99.06	alanine--tRNA ligase-like OS=Cucumis melo OX=3656 GN=LOC103503213 PE=4 SV=1	[more]
A0A0A0LEP6	4.1e-48	96.23	Alanine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_3G656490 PE=3 SV=1	[more]
A0A6J1F2W2	2.2e-46	94.34	Alanine--tRNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111441875 PE=3 SV=1	[more]

BLAST of MELO3C027271 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50200.1	2.0e-39	76.42	Alanyl-tRNA synthetase	[more]
AT1G50200.2	2.0e-39	76.42	Alanyl-tRNA synthetase	[more]
AT5G22800.1	3.8e-06	33.96	Alanyl-tRNA synthetase, class IIc	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018164	Alanyl-tRNA synthetase, class IIc, N-terminal	PFAM	PF01411	tRNA-synt_2c	coord: 1..106 e-value: 3.6E-18 score: 65.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR11777:SF35	BNACNNG61840D PROTEIN	coord: 1..106
None	No IPR available	PANTHER	PTHR11777	ALANYL-TRNA SYNTHETASE	coord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027271.1	MELO3C027271.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006419	alanyl-tRNA aminoacylation
molecular_function	GO:0004813	alanine-tRNA ligase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000166	nucleotide binding